Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_03435 and BACOVA_03436 are separated by 7 nucleotides BACOVA_03436 and BACOVA_03437 are separated by 21 nucleotides
BACOVA_03435: BACOVA_03435 - hypothetical protein, at 163,170 to 165,086
_03435
BACOVA_03436: BACOVA_03436 - glycosyl hydrolase, family 43, at 165,094 to 166,482
_03436
BACOVA_03437: BACOVA_03437 - response regulator receiver domain protein, at 166,504 to 170,523
_03437
Position (kb) 165
166
167 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 164.095 kb on - strand, within BACOVA_03435 at 164.142 kb on + strand, within BACOVA_03435 at 164.147 kb on + strand, within BACOVA_03435 at 164.147 kb on + strand, within BACOVA_03435 at 164.147 kb on + strand, within BACOVA_03435 at 164.211 kb on + strand, within BACOVA_03435 at 164.259 kb on + strand, within BACOVA_03435 at 164.260 kb on - strand, within BACOVA_03435 at 164.261 kb on + strand, within BACOVA_03435 at 164.261 kb on + strand, within BACOVA_03435 at 164.326 kb on - strand, within BACOVA_03435 at 164.328 kb on + strand, within BACOVA_03435 at 164.328 kb on + strand, within BACOVA_03435 at 164.328 kb on + strand, within BACOVA_03435 at 164.370 kb on - strand, within BACOVA_03435 at 164.370 kb on - strand, within BACOVA_03435 at 164.374 kb on - strand, within BACOVA_03435 at 164.413 kb on + strand, within BACOVA_03435 at 164.413 kb on + strand, within BACOVA_03435 at 164.413 kb on + strand, within BACOVA_03435 at 164.414 kb on - strand, within BACOVA_03435 at 164.414 kb on - strand, within BACOVA_03435 at 164.415 kb on + strand, within BACOVA_03435 at 164.416 kb on - strand, within BACOVA_03435 at 164.416 kb on - strand, within BACOVA_03435 at 164.461 kb on + strand, within BACOVA_03435 at 164.528 kb on + strand, within BACOVA_03435 at 164.528 kb on + strand, within BACOVA_03435 at 164.528 kb on + strand, within BACOVA_03435 at 164.531 kb on + strand, within BACOVA_03435 at 164.532 kb on - strand, within BACOVA_03435 at 164.652 kb on + strand, within BACOVA_03435 at 164.668 kb on - strand, within BACOVA_03435 at 164.702 kb on - strand, within BACOVA_03435 at 164.814 kb on + strand, within BACOVA_03435 at 164.815 kb on - strand, within BACOVA_03435 at 164.901 kb on - strand at 165.004 kb on - strand at 165.035 kb on + strand at 165.036 kb on - strand at 165.073 kb on + strand at 165.073 kb on + strand at 165.091 kb on - strand at 165.123 kb on + strand at 165.123 kb on + strand at 165.124 kb on - strand at 165.195 kb on + strand at 165.198 kb on + strand at 165.198 kb on + strand at 165.199 kb on - strand at 165.213 kb on + strand at 165.213 kb on + strand at 165.235 kb on + strand, within BACOVA_03436 at 165.235 kb on + strand, within BACOVA_03436 at 165.235 kb on + strand, within BACOVA_03436 at 165.236 kb on - strand, within BACOVA_03436 at 165.241 kb on + strand, within BACOVA_03436 at 165.242 kb on - strand, within BACOVA_03436 at 165.242 kb on - strand, within BACOVA_03436 at 165.244 kb on - strand, within BACOVA_03436 at 165.296 kb on + strand, within BACOVA_03436 at 165.296 kb on + strand, within BACOVA_03436 at 165.296 kb on + strand, within BACOVA_03436 at 165.299 kb on - strand, within BACOVA_03436 at 165.313 kb on - strand, within BACOVA_03436 at 165.412 kb on - strand, within BACOVA_03436 at 165.484 kb on - strand, within BACOVA_03436 at 165.484 kb on - strand, within BACOVA_03436 at 165.502 kb on - strand, within BACOVA_03436 at 165.544 kb on + strand, within BACOVA_03436 at 165.546 kb on + strand, within BACOVA_03436 at 165.547 kb on - strand, within BACOVA_03436 at 165.556 kb on - strand, within BACOVA_03436 at 165.586 kb on + strand, within BACOVA_03436 at 165.587 kb on - strand, within BACOVA_03436 at 165.587 kb on - strand, within BACOVA_03436 at 165.592 kb on + strand, within BACOVA_03436 at 165.593 kb on - strand, within BACOVA_03436 at 165.613 kb on + strand, within BACOVA_03436 at 165.613 kb on + strand, within BACOVA_03436 at 165.614 kb on - strand, within BACOVA_03436 at 165.614 kb on - strand, within BACOVA_03436 at 165.616 kb on + strand, within BACOVA_03436 at 165.616 kb on + strand, within BACOVA_03436 at 165.727 kb on - strand, within BACOVA_03436 at 165.733 kb on - strand, within BACOVA_03436 at 165.733 kb on - strand, within BACOVA_03436 at 165.739 kb on - strand, within BACOVA_03436 at 165.742 kb on + strand, within BACOVA_03436 at 165.743 kb on - strand, within BACOVA_03436 at 165.745 kb on - strand, within BACOVA_03436 at 165.745 kb on - strand, within BACOVA_03436 at 165.809 kb on + strand, within BACOVA_03436 at 165.819 kb on + strand, within BACOVA_03436 at 165.819 kb on + strand, within BACOVA_03436 at 165.862 kb on + strand, within BACOVA_03436 at 165.863 kb on - strand, within BACOVA_03436 at 165.863 kb on - strand, within BACOVA_03436 at 165.863 kb on - strand, within BACOVA_03436 at 165.884 kb on + strand, within BACOVA_03436 at 165.929 kb on - strand, within BACOVA_03436 at 165.930 kb on + strand, within BACOVA_03436 at 165.952 kb on + strand, within BACOVA_03436 at 165.954 kb on - strand, within BACOVA_03436 at 165.957 kb on + strand, within BACOVA_03436 at 166.015 kb on - strand, within BACOVA_03436 at 166.015 kb on - strand, within BACOVA_03436 at 166.019 kb on - strand, within BACOVA_03436 at 166.044 kb on + strand, within BACOVA_03436 at 166.054 kb on - strand, within BACOVA_03436 at 166.080 kb on + strand, within BACOVA_03436 at 166.081 kb on - strand, within BACOVA_03436 at 166.081 kb on - strand, within BACOVA_03436 at 166.093 kb on + strand, within BACOVA_03436 at 166.094 kb on - strand, within BACOVA_03436 at 166.164 kb on + strand, within BACOVA_03436 at 166.166 kb on + strand, within BACOVA_03436 at 166.167 kb on - strand, within BACOVA_03436 at 166.168 kb on + strand, within BACOVA_03436 at 166.168 kb on + strand, within BACOVA_03436 at 166.168 kb on + strand, within BACOVA_03436 at 166.169 kb on - strand, within BACOVA_03436 at 166.169 kb on - strand, within BACOVA_03436 at 166.169 kb on - strand, within BACOVA_03436 at 166.169 kb on - strand, within BACOVA_03436 at 166.169 kb on - strand, within BACOVA_03436 at 166.169 kb on - strand, within BACOVA_03436 at 166.169 kb on - strand, within BACOVA_03436 at 166.170 kb on + strand, within BACOVA_03436 at 166.170 kb on + strand, within BACOVA_03436 at 166.171 kb on - strand, within BACOVA_03436 at 166.171 kb on - strand, within BACOVA_03436 at 166.171 kb on - strand, within BACOVA_03436 at 166.173 kb on - strand, within BACOVA_03436 at 166.196 kb on - strand, within BACOVA_03436 at 166.197 kb on + strand, within BACOVA_03436 at 166.200 kb on - strand, within BACOVA_03436 at 166.206 kb on - strand, within BACOVA_03436 at 166.293 kb on + strand, within BACOVA_03436 at 166.294 kb on - strand, within BACOVA_03436 at 166.294 kb on - strand, within BACOVA_03436 at 166.302 kb on + strand, within BACOVA_03436 at 166.302 kb on + strand, within BACOVA_03436 at 166.302 kb on + strand, within BACOVA_03436 at 166.304 kb on + strand, within BACOVA_03436 at 166.304 kb on + strand, within BACOVA_03436 at 166.304 kb on + strand, within BACOVA_03436 at 166.381 kb on - strand at 166.386 kb on - strand at 166.404 kb on - strand at 166.410 kb on + strand at 166.414 kb on + strand at 166.421 kb on + strand at 166.434 kb on + strand at 166.434 kb on + strand at 166.465 kb on + strand at 166.473 kb on + strand at 166.480 kb on + strand at 166.505 kb on + strand at 166.538 kb on + strand at 166.538 kb on + strand at 166.538 kb on + strand at 166.539 kb on - strand at 166.539 kb on - strand at 166.560 kb on - strand at 166.632 kb on + strand at 166.632 kb on + strand at 166.632 kb on + strand at 166.632 kb on + strand at 166.633 kb on - strand at 166.633 kb on - strand at 166.675 kb on + strand at 166.676 kb on - strand at 166.676 kb on - strand at 166.676 kb on - strand at 166.677 kb on + strand at 166.681 kb on - strand at 166.684 kb on + strand at 166.684 kb on + strand at 166.685 kb on - strand at 166.738 kb on + strand at 166.738 kb on + strand at 166.739 kb on - strand at 166.750 kb on - strand at 166.753 kb on + strand at 166.786 kb on - strand at 166.821 kb on + strand at 166.900 kb on + strand at 166.923 kb on + strand, within BACOVA_03437 at 166.924 kb on - strand, within BACOVA_03437 at 166.924 kb on - strand, within BACOVA_03437 at 166.927 kb on - strand, within BACOVA_03437 at 166.999 kb on - strand, within BACOVA_03437 at 167.058 kb on + strand, within BACOVA_03437 at 167.059 kb on - strand, within BACOVA_03437 at 167.059 kb on - strand, within BACOVA_03437 at 167.071 kb on + strand, within BACOVA_03437 at 167.071 kb on + strand, within BACOVA_03437 at 167.134 kb on - strand, within BACOVA_03437 at 167.161 kb on + strand, within BACOVA_03437 at 167.232 kb on + strand, within BACOVA_03437 at 167.234 kb on + strand, within BACOVA_03437 at 167.261 kb on - strand, within BACOVA_03437 at 167.266 kb on + strand, within BACOVA_03437 at 167.277 kb on - strand, within BACOVA_03437 at 167.287 kb on + strand, within BACOVA_03437 at 167.317 kb on + strand, within BACOVA_03437 at 167.354 kb on - strand, within BACOVA_03437 at 167.354 kb on - strand, within BACOVA_03437 at 167.395 kb on + strand, within BACOVA_03437 at 167.427 kb on + strand, within BACOVA_03437 at 167.461 kb on + strand, within BACOVA_03437 at 167.465 kb on + strand, within BACOVA_03437 at 167.465 kb on + strand, within BACOVA_03437 at 167.469 kb on + strand, within BACOVA_03437 at 167.482 kb on + strand, within BACOVA_03437 at 167.482 kb on + strand, within BACOVA_03437
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 164,095 - BACOVA_03435 0.48 +2.0 164,142 + BACOVA_03435 0.51 -0.3 164,147 + BACOVA_03435 0.51 -0.4 164,147 + BACOVA_03435 0.51 +2.0 164,147 + BACOVA_03435 0.51 +0.0 164,211 + BACOVA_03435 0.54 +0.6 164,259 + BACOVA_03435 0.57 +0.4 164,260 - BACOVA_03435 0.57 -1.0 164,261 + BACOVA_03435 0.57 +0.2 164,261 + BACOVA_03435 0.57 -2.1 164,326 - BACOVA_03435 0.60 -0.4 164,328 + BACOVA_03435 0.60 +1.0 164,328 + BACOVA_03435 0.60 +0.3 164,328 + BACOVA_03435 0.60 -0.0 164,370 - BACOVA_03435 0.63 -0.2 164,370 - BACOVA_03435 0.63 -0.2 164,374 - BACOVA_03435 0.63 -1.5 164,413 + BACOVA_03435 0.65 -0.2 164,413 + BACOVA_03435 0.65 -0.6 164,413 + BACOVA_03435 0.65 +1.2 164,414 - BACOVA_03435 0.65 -1.2 164,414 - BACOVA_03435 0.65 +0.8 164,415 + BACOVA_03435 0.65 -0.9 164,416 - BACOVA_03435 0.65 -0.4 164,416 - BACOVA_03435 0.65 -0.3 164,461 + BACOVA_03435 0.67 -0.2 164,528 + BACOVA_03435 0.71 -0.9 164,528 + BACOVA_03435 0.71 +1.4 164,528 + BACOVA_03435 0.71 +1.2 164,531 + BACOVA_03435 0.71 -0.5 164,532 - BACOVA_03435 0.71 -0.1 164,652 + BACOVA_03435 0.77 +0.1 164,668 - BACOVA_03435 0.78 -0.7 164,702 - BACOVA_03435 0.80 -0.4 164,814 + BACOVA_03435 0.86 +0.2 164,815 - BACOVA_03435 0.86 -1.2 164,901 - -2.8 165,004 - +0.4 165,035 + -1.0 165,036 - +1.0 165,073 + -0.0 165,073 + +0.7 165,091 - +0.8 165,123 + -0.0 165,123 + +0.2 165,124 - -1.6 165,195 + -0.8 165,198 + +0.0 165,198 + -1.2 165,199 - -0.0 165,213 + +0.8 165,213 + +0.2 165,235 + BACOVA_03436 0.10 +0.7 165,235 + BACOVA_03436 0.10 +1.9 165,235 + BACOVA_03436 0.10 -1.2 165,236 - BACOVA_03436 0.10 -0.3 165,241 + BACOVA_03436 0.11 -0.6 165,242 - BACOVA_03436 0.11 -0.2 165,242 - BACOVA_03436 0.11 -0.4 165,244 - BACOVA_03436 0.11 -1.4 165,296 + BACOVA_03436 0.15 +0.2 165,296 + BACOVA_03436 0.15 -0.6 165,296 + BACOVA_03436 0.15 +0.4 165,299 - BACOVA_03436 0.15 -0.1 165,313 - BACOVA_03436 0.16 +1.3 165,412 - BACOVA_03436 0.23 -0.9 165,484 - BACOVA_03436 0.28 +1.6 165,484 - BACOVA_03436 0.28 -0.2 165,502 - BACOVA_03436 0.29 +1.4 165,544 + BACOVA_03436 0.32 -0.9 165,546 + BACOVA_03436 0.33 -0.6 165,547 - BACOVA_03436 0.33 +0.3 165,556 - BACOVA_03436 0.33 +0.6 165,586 + BACOVA_03436 0.35 +0.4 165,587 - BACOVA_03436 0.35 -1.4 165,587 - BACOVA_03436 0.35 -0.4 165,592 + BACOVA_03436 0.36 +0.7 165,593 - BACOVA_03436 0.36 +2.0 165,613 + BACOVA_03436 0.37 -0.6 165,613 + BACOVA_03436 0.37 +1.3 165,614 - BACOVA_03436 0.37 +1.3 165,614 - BACOVA_03436 0.37 +1.0 165,616 + BACOVA_03436 0.38 +0.4 165,616 + BACOVA_03436 0.38 +1.1 165,727 - BACOVA_03436 0.46 -0.7 165,733 - BACOVA_03436 0.46 -0.7 165,733 - BACOVA_03436 0.46 +0.0 165,739 - BACOVA_03436 0.46 -0.6 165,742 + BACOVA_03436 0.47 -2.1 165,743 - BACOVA_03436 0.47 -0.8 165,745 - BACOVA_03436 0.47 +0.0 165,745 - BACOVA_03436 0.47 -1.0 165,809 + BACOVA_03436 0.51 +1.3 165,819 + BACOVA_03436 0.52 +0.6 165,819 + BACOVA_03436 0.52 -0.3 165,862 + BACOVA_03436 0.55 +0.0 165,863 - BACOVA_03436 0.55 -0.6 165,863 - BACOVA_03436 0.55 -0.4 165,863 - BACOVA_03436 0.55 -0.8 165,884 + BACOVA_03436 0.57 -0.3 165,929 - BACOVA_03436 0.60 -0.3 165,930 + BACOVA_03436 0.60 +1.2 165,952 + BACOVA_03436 0.62 +0.2 165,954 - BACOVA_03436 0.62 -1.6 165,957 + BACOVA_03436 0.62 +1.3 166,015 - BACOVA_03436 0.66 -2.4 166,015 - BACOVA_03436 0.66 -0.1 166,019 - BACOVA_03436 0.67 -0.4 166,044 + BACOVA_03436 0.68 -0.4 166,054 - BACOVA_03436 0.69 -1.7 166,080 + BACOVA_03436 0.71 +0.9 166,081 - BACOVA_03436 0.71 +0.2 166,081 - BACOVA_03436 0.71 -1.4 166,093 + BACOVA_03436 0.72 +0.2 166,094 - BACOVA_03436 0.72 -0.0 166,164 + BACOVA_03436 0.77 +0.5 166,166 + BACOVA_03436 0.77 -1.0 166,167 - BACOVA_03436 0.77 -0.2 166,168 + BACOVA_03436 0.77 -1.2 166,168 + BACOVA_03436 0.77 +1.6 166,168 + BACOVA_03436 0.77 +0.0 166,169 - BACOVA_03436 0.77 -0.5 166,169 - BACOVA_03436 0.77 -0.3 166,169 - BACOVA_03436 0.77 -0.3 166,169 - BACOVA_03436 0.77 +0.1 166,169 - BACOVA_03436 0.77 +0.2 166,169 - BACOVA_03436 0.77 +0.7 166,169 - BACOVA_03436 0.77 -0.9 166,170 + BACOVA_03436 0.77 +1.8 166,170 + BACOVA_03436 0.77 -0.9 166,171 - BACOVA_03436 0.78 +0.7 166,171 - BACOVA_03436 0.78 +0.3 166,171 - BACOVA_03436 0.78 -0.3 166,173 - BACOVA_03436 0.78 -2.3 166,196 - BACOVA_03436 0.79 +0.4 166,197 + BACOVA_03436 0.79 +0.2 166,200 - BACOVA_03436 0.80 -0.1 166,206 - BACOVA_03436 0.80 +0.7 166,293 + BACOVA_03436 0.86 +0.8 166,294 - BACOVA_03436 0.86 +0.6 166,294 - BACOVA_03436 0.86 +0.4 166,302 + BACOVA_03436 0.87 -2.0 166,302 + BACOVA_03436 0.87 +0.1 166,302 + BACOVA_03436 0.87 +1.5 166,304 + BACOVA_03436 0.87 +0.8 166,304 + BACOVA_03436 0.87 +2.0 166,304 + BACOVA_03436 0.87 -1.9 166,381 - -0.3 166,386 - +1.2 166,404 - +0.4 166,410 + -1.2 166,414 + +0.4 166,421 + +0.7 166,434 + +1.0 166,434 + +0.5 166,465 + -1.6 166,473 + -0.2 166,480 + +1.3 166,505 + +1.5 166,538 + -0.3 166,538 + -0.8 166,538 + -0.9 166,539 - +0.9 166,539 - -2.6 166,560 - +0.5 166,632 + +0.5 166,632 + -1.1 166,632 + -1.0 166,632 + +1.5 166,633 - +0.2 166,633 - -0.3 166,675 + +0.2 166,676 - +0.2 166,676 - +0.3 166,676 - -1.1 166,677 + -0.3 166,681 - -0.0 166,684 + +0.9 166,684 + -0.6 166,685 - -1.8 166,738 + +0.2 166,738 + +0.7 166,739 - -0.0 166,750 - -0.1 166,753 + -0.4 166,786 - -1.3 166,821 + -0.7 166,900 + -2.9 166,923 + BACOVA_03437 0.10 -1.9 166,924 - BACOVA_03437 0.10 -0.4 166,924 - BACOVA_03437 0.10 +0.2 166,927 - BACOVA_03437 0.11 -0.2 166,999 - BACOVA_03437 0.12 -1.4 167,058 + BACOVA_03437 0.14 -0.1 167,059 - BACOVA_03437 0.14 +0.9 167,059 - BACOVA_03437 0.14 +0.2 167,071 + BACOVA_03437 0.14 +0.2 167,071 + BACOVA_03437 0.14 -1.6 167,134 - BACOVA_03437 0.16 -3.0 167,161 + BACOVA_03437 0.16 +0.5 167,232 + BACOVA_03437 0.18 -1.3 167,234 + BACOVA_03437 0.18 -0.3 167,261 - BACOVA_03437 0.19 -0.2 167,266 + BACOVA_03437 0.19 -0.4 167,277 - BACOVA_03437 0.19 -0.0 167,287 + BACOVA_03437 0.19 -0.0 167,317 + BACOVA_03437 0.20 +0.4 167,354 - BACOVA_03437 0.21 +0.2 167,354 - BACOVA_03437 0.21 -0.8 167,395 + BACOVA_03437 0.22 +0.1 167,427 + BACOVA_03437 0.23 -0.5 167,461 + BACOVA_03437 0.24 -1.9 167,465 + BACOVA_03437 0.24 -2.8 167,465 + BACOVA_03437 0.24 +1.0 167,469 + BACOVA_03437 0.24 -0.5 167,482 + BACOVA_03437 0.24 -0.5 167,482 + BACOVA_03437 0.24 -0.2
Or see this region's nucleotide sequence