Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03068

Experiment: D-Galactose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03067 and BACOVA_03068 are separated by 18 nucleotidesBACOVA_03068 and BACOVA_03069 are separated by 238 nucleotidesBACOVA_03069 and BACOVA_03070 are separated by 103 nucleotides BACOVA_03067: BACOVA_03067 - hypothetical protein, at 138,282 to 139,298 _03067 BACOVA_03068: BACOVA_03068 - hypothetical protein, at 139,317 to 139,934 _03068 BACOVA_03069: BACOVA_03069 - tRNA-Lys, at 140,173 to 140,245 _03069 BACOVA_03070: BACOVA_03070 - hypothetical protein, at 140,349 to 141,473 _03070 Position (kb) 139 140Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3 4at 138.350 kb on + strandat 138.355 kb on + strandat 138.356 kb on - strandat 138.373 kb on - strandat 138.380 kb on + strandat 138.380 kb on + strandat 138.380 kb on + strandat 138.381 kb on - strandat 138.381 kb on - strandat 138.381 kb on - strandat 138.443 kb on - strand, within BACOVA_03067at 138.446 kb on + strand, within BACOVA_03067at 138.446 kb on + strand, within BACOVA_03067at 138.447 kb on - strand, within BACOVA_03067at 138.449 kb on + strand, within BACOVA_03067at 138.449 kb on + strand, within BACOVA_03067at 138.453 kb on + strand, within BACOVA_03067at 138.475 kb on - strand, within BACOVA_03067at 138.486 kb on + strand, within BACOVA_03067at 138.486 kb on + strand, within BACOVA_03067at 138.487 kb on - strand, within BACOVA_03067at 138.487 kb on - strand, within BACOVA_03067at 138.487 kb on - strand, within BACOVA_03067at 138.487 kb on - strand, within BACOVA_03067at 138.495 kb on - strand, within BACOVA_03067at 138.497 kb on - strand, within BACOVA_03067at 138.497 kb on - strand, within BACOVA_03067at 138.552 kb on + strand, within BACOVA_03067at 138.573 kb on + strand, within BACOVA_03067at 138.632 kb on + strand, within BACOVA_03067at 138.635 kb on - strand, within BACOVA_03067at 138.646 kb on - strand, within BACOVA_03067at 138.654 kb on + strand, within BACOVA_03067at 138.685 kb on + strand, within BACOVA_03067at 138.686 kb on - strand, within BACOVA_03067at 138.686 kb on - strand, within BACOVA_03067at 138.686 kb on - strand, within BACOVA_03067at 138.686 kb on - strand, within BACOVA_03067at 138.701 kb on - strand, within BACOVA_03067at 138.704 kb on - strand, within BACOVA_03067at 138.704 kb on - strand, within BACOVA_03067at 138.708 kb on + strand, within BACOVA_03067at 138.715 kb on - strand, within BACOVA_03067at 138.733 kb on - strand, within BACOVA_03067at 138.773 kb on + strand, within BACOVA_03067at 138.781 kb on + strand, within BACOVA_03067at 138.788 kb on + strand, within BACOVA_03067at 138.789 kb on - strand, within BACOVA_03067at 138.803 kb on + strand, within BACOVA_03067at 138.862 kb on + strand, within BACOVA_03067at 138.904 kb on + strand, within BACOVA_03067at 138.904 kb on + strand, within BACOVA_03067at 138.905 kb on - strand, within BACOVA_03067at 138.931 kb on - strand, within BACOVA_03067at 138.935 kb on + strand, within BACOVA_03067at 138.935 kb on + strand, within BACOVA_03067at 138.936 kb on - strand, within BACOVA_03067at 138.936 kb on - strand, within BACOVA_03067at 138.987 kb on + strand, within BACOVA_03067at 139.024 kb on + strand, within BACOVA_03067at 139.029 kb on - strand, within BACOVA_03067at 139.032 kb on + strand, within BACOVA_03067at 139.032 kb on + strand, within BACOVA_03067at 139.043 kb on + strand, within BACOVA_03067at 139.053 kb on + strand, within BACOVA_03067at 139.054 kb on - strand, within BACOVA_03067at 139.054 kb on - strand, within BACOVA_03067at 139.055 kb on + strand, within BACOVA_03067at 139.055 kb on + strand, within BACOVA_03067at 139.063 kb on + strand, within BACOVA_03067at 139.101 kb on + strand, within BACOVA_03067at 139.102 kb on - strand, within BACOVA_03067at 139.116 kb on + strand, within BACOVA_03067at 139.117 kb on - strand, within BACOVA_03067at 139.117 kb on - strand, within BACOVA_03067at 139.124 kb on - strand, within BACOVA_03067at 139.129 kb on + strand, within BACOVA_03067at 139.129 kb on + strand, within BACOVA_03067at 139.129 kb on + strand, within BACOVA_03067at 139.170 kb on - strand, within BACOVA_03067at 139.211 kb on + strandat 139.226 kb on + strandat 139.238 kb on - strandat 139.269 kb on - strandat 139.301 kb on + strandat 139.302 kb on - strandat 139.304 kb on + strandat 139.305 kb on - strandat 139.361 kb on - strandat 139.364 kb on + strandat 139.364 kb on + strandat 139.376 kb on + strandat 139.404 kb on + strand, within BACOVA_03068at 139.410 kb on + strand, within BACOVA_03068at 139.411 kb on - strand, within BACOVA_03068at 139.440 kb on + strand, within BACOVA_03068at 139.440 kb on + strand, within BACOVA_03068at 139.440 kb on + strand, within BACOVA_03068at 139.441 kb on - strand, within BACOVA_03068at 139.441 kb on - strand, within BACOVA_03068at 139.444 kb on + strand, within BACOVA_03068at 139.460 kb on + strand, within BACOVA_03068at 139.469 kb on + strand, within BACOVA_03068at 139.469 kb on + strand, within BACOVA_03068at 139.495 kb on - strand, within BACOVA_03068at 139.498 kb on - strand, within BACOVA_03068at 139.509 kb on + strand, within BACOVA_03068at 139.517 kb on + strand, within BACOVA_03068at 139.523 kb on - strand, within BACOVA_03068at 139.530 kb on + strand, within BACOVA_03068at 139.596 kb on + strand, within BACOVA_03068at 139.596 kb on + strand, within BACOVA_03068at 139.598 kb on + strand, within BACOVA_03068at 139.598 kb on + strand, within BACOVA_03068at 139.600 kb on + strand, within BACOVA_03068at 139.601 kb on - strand, within BACOVA_03068at 139.611 kb on - strand, within BACOVA_03068at 139.617 kb on + strand, within BACOVA_03068at 139.618 kb on - strand, within BACOVA_03068at 139.618 kb on - strand, within BACOVA_03068at 139.651 kb on - strand, within BACOVA_03068at 139.673 kb on + strand, within BACOVA_03068at 139.674 kb on - strand, within BACOVA_03068at 139.699 kb on - strand, within BACOVA_03068at 139.707 kb on - strand, within BACOVA_03068at 139.714 kb on - strand, within BACOVA_03068at 139.714 kb on - strand, within BACOVA_03068at 139.726 kb on - strand, within BACOVA_03068at 139.740 kb on + strand, within BACOVA_03068at 139.795 kb on - strand, within BACOVA_03068at 139.813 kb on + strand, within BACOVA_03068at 139.814 kb on - strand, within BACOVA_03068at 139.814 kb on - strand, within BACOVA_03068at 139.814 kb on - strand, within BACOVA_03068at 139.858 kb on - strand, within BACOVA_03068at 139.867 kb on + strand, within BACOVA_03068at 139.867 kb on + strand, within BACOVA_03068at 139.868 kb on - strand, within BACOVA_03068at 139.868 kb on - strand, within BACOVA_03068at 139.874 kb on + strandat 139.875 kb on - strandat 139.888 kb on - strandat 139.901 kb on + strandat 139.901 kb on + strandat 139.901 kb on + strandat 139.902 kb on - strandat 139.902 kb on - strandat 139.902 kb on - strandat 139.902 kb on - strandat 139.902 kb on - strandat 139.910 kb on + strandat 139.911 kb on - strandat 139.922 kb on + strandat 139.923 kb on - strandat 139.938 kb on + strandat 139.938 kb on + strandat 139.939 kb on - strandat 139.943 kb on + strandat 139.966 kb on + strandat 139.966 kb on + strandat 140.000 kb on + strandat 140.001 kb on - strandat 140.023 kb on + strandat 140.030 kb on + strandat 140.031 kb on - strandat 140.074 kb on - strandat 140.116 kb on + strandat 140.124 kb on + strandat 140.396 kb on - strandat 140.396 kb on - strandat 140.418 kb on - strandat 140.420 kb on + strandat 140.461 kb on - strandat 140.490 kb on + strand, within BACOVA_03070at 140.491 kb on - strand, within BACOVA_03070at 140.583 kb on + strand, within BACOVA_03070at 140.707 kb on + strand, within BACOVA_03070at 140.708 kb on - strand, within BACOVA_03070at 140.708 kb on - strand, within BACOVA_03070at 140.708 kb on - strand, within BACOVA_03070at 140.708 kb on - strand, within BACOVA_03070at 140.717 kb on + strand, within BACOVA_03070at 140.718 kb on - strand, within BACOVA_03070at 140.800 kb on - strand, within BACOVA_03070at 140.800 kb on - strand, within BACOVA_03070at 140.834 kb on - strand, within BACOVA_03070at 140.853 kb on + strand, within BACOVA_03070at 140.865 kb on + strand, within BACOVA_03070at 140.883 kb on - strand, within BACOVA_03070at 140.888 kb on - strand, within BACOVA_03070at 140.892 kb on - strand, within BACOVA_03070at 140.907 kb on + strand, within BACOVA_03070at 140.908 kb on - strand, within BACOVA_03070

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C)
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138,350 + -1.7
138,355 + -0.9
138,356 - +4.1
138,373 - +2.7
138,380 + +0.3
138,380 + +1.7
138,380 + -0.8
138,381 - -1.0
138,381 - +0.8
138,381 - +0.1
138,443 - BACOVA_03067 0.16 +0.7
138,446 + BACOVA_03067 0.16 +1.0
138,446 + BACOVA_03067 0.16 -0.6
138,447 - BACOVA_03067 0.16 -0.8
138,449 + BACOVA_03067 0.16 +0.2
138,449 + BACOVA_03067 0.16 +0.7
138,453 + BACOVA_03067 0.17 +1.1
138,475 - BACOVA_03067 0.19 -1.1
138,486 + BACOVA_03067 0.20 +0.3
138,486 + BACOVA_03067 0.20 +0.2
138,487 - BACOVA_03067 0.20 +1.0
138,487 - BACOVA_03067 0.20 -0.6
138,487 - BACOVA_03067 0.20 -0.5
138,487 - BACOVA_03067 0.20 -1.1
138,495 - BACOVA_03067 0.21 +0.3
138,497 - BACOVA_03067 0.21 +0.2
138,497 - BACOVA_03067 0.21 -1.3
138,552 + BACOVA_03067 0.27 +0.0
138,573 + BACOVA_03067 0.29 -0.2
138,632 + BACOVA_03067 0.34 +0.7
138,635 - BACOVA_03067 0.35 -0.3
138,646 - BACOVA_03067 0.36 +2.1
138,654 + BACOVA_03067 0.37 +0.7
138,685 + BACOVA_03067 0.40 -0.4
138,686 - BACOVA_03067 0.40 +0.3
138,686 - BACOVA_03067 0.40 +0.0
138,686 - BACOVA_03067 0.40 -0.2
138,686 - BACOVA_03067 0.40 -1.5
138,701 - BACOVA_03067 0.41 -0.0
138,704 - BACOVA_03067 0.41 +0.2
138,704 - BACOVA_03067 0.41 -1.2
138,708 + BACOVA_03067 0.42 +0.6
138,715 - BACOVA_03067 0.43 -0.5
138,733 - BACOVA_03067 0.44 -0.2
138,773 + BACOVA_03067 0.48 +1.8
138,781 + BACOVA_03067 0.49 +0.1
138,788 + BACOVA_03067 0.50 -0.5
138,789 - BACOVA_03067 0.50 +0.3
138,803 + BACOVA_03067 0.51 -0.5
138,862 + BACOVA_03067 0.57 -0.2
138,904 + BACOVA_03067 0.61 -0.1
138,904 + BACOVA_03067 0.61 -0.8
138,905 - BACOVA_03067 0.61 +0.6
138,931 - BACOVA_03067 0.64 -0.8
138,935 + BACOVA_03067 0.64 +0.8
138,935 + BACOVA_03067 0.64 -1.1
138,936 - BACOVA_03067 0.64 -1.0
138,936 - BACOVA_03067 0.64 +1.7
138,987 + BACOVA_03067 0.69 -1.2
139,024 + BACOVA_03067 0.73 -1.5
139,029 - BACOVA_03067 0.73 -1.2
139,032 + BACOVA_03067 0.74 -0.7
139,032 + BACOVA_03067 0.74 +0.6
139,043 + BACOVA_03067 0.75 -0.0
139,053 + BACOVA_03067 0.76 +0.9
139,054 - BACOVA_03067 0.76 +0.1
139,054 - BACOVA_03067 0.76 -0.1
139,055 + BACOVA_03067 0.76 -1.7
139,055 + BACOVA_03067 0.76 -0.1
139,063 + BACOVA_03067 0.77 -1.0
139,101 + BACOVA_03067 0.81 -0.2
139,102 - BACOVA_03067 0.81 -1.5
139,116 + BACOVA_03067 0.82 -0.9
139,117 - BACOVA_03067 0.82 +0.2
139,117 - BACOVA_03067 0.82 +0.8
139,124 - BACOVA_03067 0.83 -0.3
139,129 + BACOVA_03067 0.83 -0.5
139,129 + BACOVA_03067 0.83 +2.3
139,129 + BACOVA_03067 0.83 -0.1
139,170 - BACOVA_03067 0.87 -0.7
139,211 + +0.9
139,226 + -0.3
139,238 - -0.2
139,269 - +0.3
139,301 + +0.1
139,302 - -0.2
139,304 + +0.4
139,305 - +0.1
139,361 - +1.7
139,364 + -0.2
139,364 + +0.5
139,376 + -0.5
139,404 + BACOVA_03068 0.14 -0.9
139,410 + BACOVA_03068 0.15 +0.8
139,411 - BACOVA_03068 0.15 +1.3
139,440 + BACOVA_03068 0.20 -0.3
139,440 + BACOVA_03068 0.20 +0.7
139,440 + BACOVA_03068 0.20 +0.6
139,441 - BACOVA_03068 0.20 +0.8
139,441 - BACOVA_03068 0.20 +0.0
139,444 + BACOVA_03068 0.21 +0.9
139,460 + BACOVA_03068 0.23 +0.3
139,469 + BACOVA_03068 0.25 -0.9
139,469 + BACOVA_03068 0.25 +0.5
139,495 - BACOVA_03068 0.29 +0.0
139,498 - BACOVA_03068 0.29 +0.8
139,509 + BACOVA_03068 0.31 -1.7
139,517 + BACOVA_03068 0.32 -0.4
139,523 - BACOVA_03068 0.33 -0.3
139,530 + BACOVA_03068 0.34 -0.4
139,596 + BACOVA_03068 0.45 -0.4
139,596 + BACOVA_03068 0.45 -1.0
139,598 + BACOVA_03068 0.45 +1.6
139,598 + BACOVA_03068 0.45 -4.9
139,600 + BACOVA_03068 0.46 -1.3
139,601 - BACOVA_03068 0.46 +1.0
139,611 - BACOVA_03068 0.48 -1.1
139,617 + BACOVA_03068 0.49 +0.9
139,618 - BACOVA_03068 0.49 +0.0
139,618 - BACOVA_03068 0.49 -0.7
139,651 - BACOVA_03068 0.54 +0.4
139,673 + BACOVA_03068 0.58 +1.7
139,674 - BACOVA_03068 0.58 +0.5
139,699 - BACOVA_03068 0.62 +0.0
139,707 - BACOVA_03068 0.63 -2.7
139,714 - BACOVA_03068 0.64 -1.0
139,714 - BACOVA_03068 0.64 -0.9
139,726 - BACOVA_03068 0.66 -1.9
139,740 + BACOVA_03068 0.68 +0.0
139,795 - BACOVA_03068 0.77 +0.6
139,813 + BACOVA_03068 0.80 -0.6
139,814 - BACOVA_03068 0.80 +1.7
139,814 - BACOVA_03068 0.80 -0.9
139,814 - BACOVA_03068 0.80 +1.6
139,858 - BACOVA_03068 0.88 -2.9
139,867 + BACOVA_03068 0.89 -0.5
139,867 + BACOVA_03068 0.89 +0.8
139,868 - BACOVA_03068 0.89 +1.1
139,868 - BACOVA_03068 0.89 +0.0
139,874 + -0.3
139,875 - -0.4
139,888 - +0.4
139,901 + +1.4
139,901 + -1.0
139,901 + +0.5
139,902 - -3.3
139,902 - +0.6
139,902 - +0.1
139,902 - +0.6
139,902 - +0.0
139,910 + -1.7
139,911 - -0.4
139,922 + +0.8
139,923 - +0.7
139,938 + -0.1
139,938 + +0.2
139,939 - +0.1
139,943 + -0.1
139,966 + +0.8
139,966 + -2.4
140,000 + +0.1
140,001 - +0.3
140,023 + -0.0
140,030 + -0.1
140,031 - +0.1
140,074 - +1.0
140,116 + -0.0
140,124 + +0.6
140,396 - -0.8
140,396 - -0.8
140,418 - -0.4
140,420 + +0.0
140,461 - -0.4
140,490 + BACOVA_03070 0.13 -0.8
140,491 - BACOVA_03070 0.13 -0.8
140,583 + BACOVA_03070 0.21 -1.3
140,707 + BACOVA_03070 0.32 -0.7
140,708 - BACOVA_03070 0.32 -0.8
140,708 - BACOVA_03070 0.32 -2.3
140,708 - BACOVA_03070 0.32 +0.8
140,708 - BACOVA_03070 0.32 -1.6
140,717 + BACOVA_03070 0.33 -1.8
140,718 - BACOVA_03070 0.33 -2.4
140,800 - BACOVA_03070 0.40 -0.4
140,800 - BACOVA_03070 0.40 -0.6
140,834 - BACOVA_03070 0.43 -1.1
140,853 + BACOVA_03070 0.45 -1.4
140,865 + BACOVA_03070 0.46 +0.5
140,883 - BACOVA_03070 0.47 -0.2
140,888 - BACOVA_03070 0.48 -0.0
140,892 - BACOVA_03070 0.48 -1.2
140,907 + BACOVA_03070 0.50 -2.3
140,908 - BACOVA_03070 0.50 -1.7

Or see this region's nucleotide sequence