Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02807 and BACOVA_02808 are separated by 12 nucleotides BACOVA_02808 and BACOVA_02809 are separated by 21 nucleotides BACOVA_02809 and BACOVA_02810 overlap by 10 nucleotides BACOVA_02810 and BACOVA_02811 are separated by 6 nucleotides
BACOVA_02807: BACOVA_02807 - hypothetical protein, at 274,229 to 275,854
_02807
BACOVA_02808: BACOVA_02808 - hypothetical protein, at 275,867 to 276,277
_02808
BACOVA_02809: BACOVA_02809 - hypothetical protein, at 276,299 to 277,957
_02809
BACOVA_02810: BACOVA_02810 - hypothetical protein, at 277,948 to 278,064
_02810
BACOVA_02811: BACOVA_02811 - arylsulfatase, at 278,071 to 279,597
_02811
Position (kb) 276
277
278 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 275.305 kb on + strand, within BACOVA_02807 at 275.306 kb on - strand, within BACOVA_02807 at 275.306 kb on - strand, within BACOVA_02807 at 275.360 kb on - strand, within BACOVA_02807 at 275.488 kb on + strand, within BACOVA_02807 at 275.546 kb on - strand, within BACOVA_02807 at 275.592 kb on + strand, within BACOVA_02807 at 275.671 kb on + strand, within BACOVA_02807 at 275.677 kb on + strand, within BACOVA_02807 at 275.677 kb on + strand, within BACOVA_02807 at 275.678 kb on - strand, within BACOVA_02807 at 275.685 kb on + strand, within BACOVA_02807 at 275.727 kb on + strand at 275.740 kb on + strand at 275.740 kb on + strand at 275.744 kb on - strand at 275.756 kb on - strand at 275.831 kb on + strand at 275.836 kb on + strand at 275.837 kb on - strand at 275.858 kb on - strand at 275.858 kb on - strand at 275.868 kb on + strand at 275.888 kb on + strand at 275.892 kb on - strand at 275.892 kb on - strand at 275.893 kb on + strand at 275.936 kb on - strand, within BACOVA_02808 at 275.943 kb on - strand, within BACOVA_02808 at 276.094 kb on + strand, within BACOVA_02808 at 276.100 kb on + strand, within BACOVA_02808 at 276.155 kb on - strand, within BACOVA_02808 at 276.157 kb on - strand, within BACOVA_02808 at 276.172 kb on + strand, within BACOVA_02808 at 276.172 kb on + strand, within BACOVA_02808 at 276.173 kb on - strand, within BACOVA_02808 at 276.183 kb on - strand, within BACOVA_02808 at 276.213 kb on + strand, within BACOVA_02808 at 276.260 kb on + strand at 276.261 kb on - strand at 276.261 kb on - strand at 276.261 kb on - strand at 276.264 kb on + strand at 276.265 kb on - strand at 276.265 kb on - strand at 276.266 kb on + strand at 276.267 kb on - strand at 276.269 kb on + strand at 276.296 kb on + strand at 276.301 kb on - strand at 276.307 kb on + strand at 276.308 kb on - strand at 276.345 kb on + strand at 276.365 kb on + strand at 276.385 kb on + strand at 276.385 kb on + strand at 276.392 kb on + strand at 276.394 kb on + strand at 276.395 kb on - strand at 276.420 kb on - strand at 276.420 kb on - strand at 276.425 kb on - strand at 276.427 kb on - strand at 276.469 kb on + strand, within BACOVA_02809 at 276.470 kb on - strand, within BACOVA_02809 at 276.470 kb on - strand, within BACOVA_02809 at 276.530 kb on - strand, within BACOVA_02809 at 276.575 kb on + strand, within BACOVA_02809 at 276.582 kb on + strand, within BACOVA_02809 at 276.582 kb on + strand, within BACOVA_02809 at 276.582 kb on + strand, within BACOVA_02809 at 276.582 kb on - strand, within BACOVA_02809 at 276.583 kb on - strand, within BACOVA_02809 at 276.583 kb on - strand, within BACOVA_02809 at 276.583 kb on - strand, within BACOVA_02809 at 276.583 kb on - strand, within BACOVA_02809 at 276.583 kb on - strand, within BACOVA_02809 at 276.583 kb on - strand, within BACOVA_02809 at 276.616 kb on + strand, within BACOVA_02809 at 276.617 kb on - strand, within BACOVA_02809 at 276.674 kb on + strand, within BACOVA_02809 at 276.683 kb on + strand, within BACOVA_02809 at 276.683 kb on + strand, within BACOVA_02809 at 276.684 kb on + strand, within BACOVA_02809 at 276.684 kb on - strand, within BACOVA_02809 at 276.684 kb on - strand, within BACOVA_02809 at 276.686 kb on - strand, within BACOVA_02809 at 276.694 kb on + strand, within BACOVA_02809 at 276.789 kb on + strand, within BACOVA_02809 at 276.792 kb on - strand, within BACOVA_02809 at 276.810 kb on + strand, within BACOVA_02809 at 276.811 kb on - strand, within BACOVA_02809 at 276.833 kb on + strand, within BACOVA_02809 at 276.838 kb on - strand, within BACOVA_02809 at 276.888 kb on + strand, within BACOVA_02809 at 276.920 kb on - strand, within BACOVA_02809 at 276.940 kb on - strand, within BACOVA_02809 at 276.943 kb on + strand, within BACOVA_02809 at 276.943 kb on + strand, within BACOVA_02809 at 276.943 kb on + strand, within BACOVA_02809 at 276.944 kb on - strand, within BACOVA_02809 at 276.944 kb on - strand, within BACOVA_02809 at 276.948 kb on + strand, within BACOVA_02809 at 276.948 kb on + strand, within BACOVA_02809 at 276.959 kb on + strand, within BACOVA_02809 at 276.976 kb on + strand, within BACOVA_02809 at 277.075 kb on + strand, within BACOVA_02809 at 277.166 kb on + strand, within BACOVA_02809 at 277.167 kb on - strand, within BACOVA_02809 at 277.167 kb on - strand, within BACOVA_02809 at 277.202 kb on + strand, within BACOVA_02809 at 277.209 kb on + strand, within BACOVA_02809 at 277.210 kb on - strand, within BACOVA_02809 at 277.226 kb on - strand, within BACOVA_02809 at 277.271 kb on + strand, within BACOVA_02809 at 277.283 kb on + strand, within BACOVA_02809 at 277.284 kb on - strand, within BACOVA_02809 at 277.284 kb on - strand, within BACOVA_02809 at 277.292 kb on - strand, within BACOVA_02809 at 277.301 kb on - strand, within BACOVA_02809 at 277.375 kb on - strand, within BACOVA_02809 at 277.523 kb on + strand, within BACOVA_02809 at 277.563 kb on - strand, within BACOVA_02809 at 277.581 kb on - strand, within BACOVA_02809 at 277.584 kb on + strand, within BACOVA_02809 at 277.627 kb on - strand, within BACOVA_02809 at 277.629 kb on - strand, within BACOVA_02809 at 277.640 kb on + strand, within BACOVA_02809 at 277.657 kb on + strand, within BACOVA_02809 at 277.714 kb on + strand, within BACOVA_02809 at 277.714 kb on + strand, within BACOVA_02809 at 277.715 kb on - strand, within BACOVA_02809 at 277.715 kb on - strand, within BACOVA_02809 at 277.859 kb on - strand at 277.870 kb on - strand at 277.870 kb on - strand at 277.910 kb on + strand at 277.923 kb on - strand at 277.953 kb on + strand at 277.953 kb on + strand at 277.957 kb on + strand at 277.957 kb on + strand at 277.957 kb on + strand at 277.957 kb on + strand at 277.958 kb on - strand at 278.005 kb on + strand, within BACOVA_02810 at 278.035 kb on - strand, within BACOVA_02810 at 278.047 kb on + strand, within BACOVA_02810 at 278.048 kb on - strand, within BACOVA_02810 at 278.077 kb on + strand at 278.106 kb on - strand at 278.209 kb on - strand at 278.220 kb on - strand at 278.271 kb on + strand, within BACOVA_02811 at 278.272 kb on - strand, within BACOVA_02811 at 278.273 kb on + strand, within BACOVA_02811 at 278.274 kb on - strand, within BACOVA_02811 at 278.274 kb on - strand, within BACOVA_02811 at 278.286 kb on + strand, within BACOVA_02811 at 278.286 kb on + strand, within BACOVA_02811 at 278.307 kb on - strand, within BACOVA_02811 at 278.336 kb on - strand, within BACOVA_02811 at 278.381 kb on + strand, within BACOVA_02811 at 278.419 kb on + strand, within BACOVA_02811 at 278.420 kb on - strand, within BACOVA_02811 at 278.450 kb on - strand, within BACOVA_02811 at 278.518 kb on - strand, within BACOVA_02811 at 278.518 kb on - strand, within BACOVA_02811 at 278.541 kb on + strand, within BACOVA_02811 at 278.542 kb on - strand, within BACOVA_02811 at 278.542 kb on - strand, within BACOVA_02811 at 278.543 kb on + strand, within BACOVA_02811 at 278.543 kb on + strand, within BACOVA_02811 at 278.544 kb on - strand, within BACOVA_02811 at 278.609 kb on + strand, within BACOVA_02811 at 278.650 kb on - strand, within BACOVA_02811 at 278.813 kb on + strand, within BACOVA_02811 at 278.862 kb on + strand, within BACOVA_02811 at 278.867 kb on - strand, within BACOVA_02811 at 278.873 kb on + strand, within BACOVA_02811 at 278.922 kb on + strand, within BACOVA_02811 at 278.922 kb on + strand, within BACOVA_02811 at 278.922 kb on + strand, within BACOVA_02811 at 278.922 kb on + strand, within BACOVA_02811 at 278.923 kb on - strand, within BACOVA_02811 at 278.925 kb on - strand, within BACOVA_02811 at 278.950 kb on + strand, within BACOVA_02811 at 278.950 kb on + strand, within BACOVA_02811 at 278.951 kb on - strand, within BACOVA_02811
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 275,305 + BACOVA_02807 0.66 -0.8 275,306 - BACOVA_02807 0.66 -1.2 275,306 - BACOVA_02807 0.66 +0.6 275,360 - BACOVA_02807 0.70 +0.8 275,488 + BACOVA_02807 0.77 -1.0 275,546 - BACOVA_02807 0.81 +0.5 275,592 + BACOVA_02807 0.84 -0.8 275,671 + BACOVA_02807 0.89 -1.2 275,677 + BACOVA_02807 0.89 +0.5 275,677 + BACOVA_02807 0.89 +0.1 275,678 - BACOVA_02807 0.89 -1.5 275,685 + BACOVA_02807 0.90 -1.6 275,727 + +0.7 275,740 + -1.3 275,740 + -1.8 275,744 - -0.9 275,756 - -1.3 275,831 + -0.8 275,836 + +0.5 275,837 - +0.2 275,858 - +1.4 275,858 - -0.1 275,868 + +0.5 275,888 + +2.4 275,892 - +0.2 275,892 - +1.0 275,893 + -0.1 275,936 - BACOVA_02808 0.17 -0.2 275,943 - BACOVA_02808 0.18 -0.7 276,094 + BACOVA_02808 0.55 +2.1 276,100 + BACOVA_02808 0.57 -0.8 276,155 - BACOVA_02808 0.70 +0.6 276,157 - BACOVA_02808 0.71 -0.1 276,172 + BACOVA_02808 0.74 +2.0 276,172 + BACOVA_02808 0.74 +0.2 276,173 - BACOVA_02808 0.74 +1.2 276,183 - BACOVA_02808 0.77 +0.3 276,213 + BACOVA_02808 0.84 -0.7 276,260 + +0.5 276,261 - +0.2 276,261 - +1.0 276,261 - +2.6 276,264 + +0.4 276,265 - -1.9 276,265 - +1.3 276,266 + -0.2 276,267 - +1.5 276,269 + -1.8 276,296 + +1.8 276,301 - -0.0 276,307 + -0.4 276,308 - +0.5 276,345 + -1.3 276,365 + +0.3 276,385 + -0.7 276,385 + +1.4 276,392 + -0.7 276,394 + +0.4 276,395 - -0.0 276,420 - -0.3 276,420 - +0.4 276,425 - -0.1 276,427 - +0.3 276,469 + BACOVA_02809 0.10 +1.4 276,470 - BACOVA_02809 0.10 +1.0 276,470 - BACOVA_02809 0.10 -0.7 276,530 - BACOVA_02809 0.14 +0.7 276,575 + BACOVA_02809 0.17 +1.5 276,582 + BACOVA_02809 0.17 +1.1 276,582 + BACOVA_02809 0.17 +0.0 276,582 + BACOVA_02809 0.17 +1.0 276,582 - BACOVA_02809 0.17 +0.2 276,583 - BACOVA_02809 0.17 -0.3 276,583 - BACOVA_02809 0.17 +0.5 276,583 - BACOVA_02809 0.17 -0.0 276,583 - BACOVA_02809 0.17 +0.4 276,583 - BACOVA_02809 0.17 -0.2 276,583 - BACOVA_02809 0.17 -1.5 276,616 + BACOVA_02809 0.19 +0.6 276,617 - BACOVA_02809 0.19 -0.6 276,674 + BACOVA_02809 0.23 -0.6 276,683 + BACOVA_02809 0.23 -1.7 276,683 + BACOVA_02809 0.23 +0.1 276,684 + BACOVA_02809 0.23 +0.4 276,684 - BACOVA_02809 0.23 +0.1 276,684 - BACOVA_02809 0.23 +1.3 276,686 - BACOVA_02809 0.23 +0.9 276,694 + BACOVA_02809 0.24 -0.5 276,789 + BACOVA_02809 0.30 +0.7 276,792 - BACOVA_02809 0.30 -3.0 276,810 + BACOVA_02809 0.31 +2.4 276,811 - BACOVA_02809 0.31 +1.3 276,833 + BACOVA_02809 0.32 +0.1 276,838 - BACOVA_02809 0.32 -1.2 276,888 + BACOVA_02809 0.36 -2.1 276,920 - BACOVA_02809 0.37 +0.4 276,940 - BACOVA_02809 0.39 +1.5 276,943 + BACOVA_02809 0.39 -1.5 276,943 + BACOVA_02809 0.39 -1.0 276,943 + BACOVA_02809 0.39 +1.4 276,944 - BACOVA_02809 0.39 -0.8 276,944 - BACOVA_02809 0.39 -0.0 276,948 + BACOVA_02809 0.39 +0.7 276,948 + BACOVA_02809 0.39 -1.7 276,959 + BACOVA_02809 0.40 -0.5 276,976 + BACOVA_02809 0.41 -0.6 277,075 + BACOVA_02809 0.47 +0.5 277,166 + BACOVA_02809 0.52 +0.7 277,167 - BACOVA_02809 0.52 +1.1 277,167 - BACOVA_02809 0.52 -0.1 277,202 + BACOVA_02809 0.54 -0.1 277,209 + BACOVA_02809 0.55 +1.0 277,210 - BACOVA_02809 0.55 +0.3 277,226 - BACOVA_02809 0.56 -0.7 277,271 + BACOVA_02809 0.59 -1.2 277,283 + BACOVA_02809 0.59 -1.1 277,284 - BACOVA_02809 0.59 -0.5 277,284 - BACOVA_02809 0.59 -1.5 277,292 - BACOVA_02809 0.60 -0.1 277,301 - BACOVA_02809 0.60 -0.2 277,375 - BACOVA_02809 0.65 -0.2 277,523 + BACOVA_02809 0.74 +0.1 277,563 - BACOVA_02809 0.76 -0.6 277,581 - BACOVA_02809 0.77 +0.7 277,584 + BACOVA_02809 0.77 -1.1 277,627 - BACOVA_02809 0.80 -0.6 277,629 - BACOVA_02809 0.80 +0.0 277,640 + BACOVA_02809 0.81 -3.0 277,657 + BACOVA_02809 0.82 -1.9 277,714 + BACOVA_02809 0.85 +0.7 277,714 + BACOVA_02809 0.85 -0.7 277,715 - BACOVA_02809 0.85 +0.2 277,715 - BACOVA_02809 0.85 +0.7 277,859 - -1.0 277,870 - -0.7 277,870 - +1.1 277,910 + +0.7 277,923 - -0.3 277,953 + +0.2 277,953 + -0.8 277,957 + +1.0 277,957 + +1.6 277,957 + -1.7 277,957 + +1.2 277,958 - +0.9 278,005 + BACOVA_02810 0.49 +0.2 278,035 - BACOVA_02810 0.74 +0.1 278,047 + BACOVA_02810 0.85 +1.0 278,048 - BACOVA_02810 0.85 +1.1 278,077 + -0.1 278,106 - +0.4 278,209 - +0.5 278,220 - -0.8 278,271 + BACOVA_02811 0.13 -0.9 278,272 - BACOVA_02811 0.13 +1.4 278,273 + BACOVA_02811 0.13 +0.0 278,274 - BACOVA_02811 0.13 +1.3 278,274 - BACOVA_02811 0.13 -0.9 278,286 + BACOVA_02811 0.14 +0.9 278,286 + BACOVA_02811 0.14 -0.3 278,307 - BACOVA_02811 0.15 +0.1 278,336 - BACOVA_02811 0.17 -0.3 278,381 + BACOVA_02811 0.20 -2.3 278,419 + BACOVA_02811 0.23 -1.6 278,420 - BACOVA_02811 0.23 +0.2 278,450 - BACOVA_02811 0.25 +0.3 278,518 - BACOVA_02811 0.29 -0.4 278,518 - BACOVA_02811 0.29 +0.2 278,541 + BACOVA_02811 0.31 -1.9 278,542 - BACOVA_02811 0.31 +0.8 278,542 - BACOVA_02811 0.31 +0.2 278,543 + BACOVA_02811 0.31 +0.7 278,543 + BACOVA_02811 0.31 +1.7 278,544 - BACOVA_02811 0.31 +0.1 278,609 + BACOVA_02811 0.35 -0.4 278,650 - BACOVA_02811 0.38 -0.7 278,813 + BACOVA_02811 0.49 +1.1 278,862 + BACOVA_02811 0.52 -1.1 278,867 - BACOVA_02811 0.52 -0.3 278,873 + BACOVA_02811 0.53 +0.8 278,922 + BACOVA_02811 0.56 -0.3 278,922 + BACOVA_02811 0.56 -0.1 278,922 + BACOVA_02811 0.56 -0.1 278,922 + BACOVA_02811 0.56 +0.4 278,923 - BACOVA_02811 0.56 +0.0 278,925 - BACOVA_02811 0.56 +1.0 278,950 + BACOVA_02811 0.58 +1.3 278,950 + BACOVA_02811 0.58 +1.1 278,951 - BACOVA_02811 0.58 +0.9
Or see this region's nucleotide sequence