Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02467

Experiment: D-Galactose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02466 and BACOVA_02467 are separated by 18 nucleotidesBACOVA_02467 and BACOVA_02468 are separated by 0 nucleotides BACOVA_02466: BACOVA_02466 - glycosyltransferase, group 1 family protein, at 228,762 to 229,883 _02466 BACOVA_02467: BACOVA_02467 - nitroreductase family protein, at 229,902 to 230,888 _02467 BACOVA_02468: BACOVA_02468 - hypothetical protein, at 230,889 to 231,926 _02468 Position (kb) 229 230 231Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 228.969 kb on - strand, within BACOVA_02466at 228.969 kb on - strand, within BACOVA_02466at 228.984 kb on - strand, within BACOVA_02466at 228.990 kb on - strand, within BACOVA_02466at 229.004 kb on - strand, within BACOVA_02466at 229.020 kb on - strand, within BACOVA_02466at 229.047 kb on + strand, within BACOVA_02466at 229.059 kb on - strand, within BACOVA_02466at 229.059 kb on - strand, within BACOVA_02466at 229.062 kb on - strand, within BACOVA_02466at 229.066 kb on - strand, within BACOVA_02466at 229.066 kb on - strand, within BACOVA_02466at 229.114 kb on - strand, within BACOVA_02466at 229.114 kb on - strand, within BACOVA_02466at 229.116 kb on - strand, within BACOVA_02466at 229.148 kb on - strand, within BACOVA_02466at 229.152 kb on - strand, within BACOVA_02466at 229.154 kb on - strand, within BACOVA_02466at 229.161 kb on - strand, within BACOVA_02466at 229.176 kb on - strand, within BACOVA_02466at 229.185 kb on - strand, within BACOVA_02466at 229.185 kb on - strand, within BACOVA_02466at 229.218 kb on - strand, within BACOVA_02466at 229.218 kb on - strand, within BACOVA_02466at 229.227 kb on - strand, within BACOVA_02466at 229.289 kb on - strand, within BACOVA_02466at 229.314 kb on - strand, within BACOVA_02466at 229.338 kb on - strand, within BACOVA_02466at 229.338 kb on - strand, within BACOVA_02466at 229.362 kb on - strand, within BACOVA_02466at 229.368 kb on - strand, within BACOVA_02466at 229.368 kb on - strand, within BACOVA_02466at 229.412 kb on - strand, within BACOVA_02466at 229.412 kb on - strand, within BACOVA_02466at 229.457 kb on + strand, within BACOVA_02466at 229.458 kb on - strand, within BACOVA_02466at 229.464 kb on - strand, within BACOVA_02466at 229.515 kb on - strand, within BACOVA_02466at 229.517 kb on - strand, within BACOVA_02466at 229.536 kb on - strand, within BACOVA_02466at 229.555 kb on + strand, within BACOVA_02466at 229.556 kb on - strand, within BACOVA_02466at 229.556 kb on - strand, within BACOVA_02466at 229.595 kb on - strand, within BACOVA_02466at 229.629 kb on - strand, within BACOVA_02466at 229.647 kb on - strand, within BACOVA_02466at 229.661 kb on - strand, within BACOVA_02466at 229.749 kb on - strand, within BACOVA_02466at 229.761 kb on - strand, within BACOVA_02466at 229.761 kb on - strand, within BACOVA_02466at 229.761 kb on - strand, within BACOVA_02466at 229.765 kb on - strand, within BACOVA_02466at 229.765 kb on - strand, within BACOVA_02466at 229.779 kb on - strandat 229.779 kb on - strandat 229.782 kb on - strandat 229.849 kb on - strandat 229.849 kb on - strandat 229.871 kb on - strandat 229.882 kb on - strandat 229.925 kb on + strandat 229.926 kb on - strandat 229.929 kb on - strandat 229.929 kb on - strandat 229.929 kb on - strandat 229.948 kb on + strandat 229.949 kb on - strandat 229.949 kb on - strandat 229.961 kb on + strandat 229.961 kb on + strandat 229.961 kb on + strandat 229.961 kb on + strandat 229.966 kb on - strandat 230.030 kb on + strand, within BACOVA_02467at 230.031 kb on - strand, within BACOVA_02467at 230.031 kb on - strand, within BACOVA_02467at 230.033 kb on - strand, within BACOVA_02467at 230.035 kb on - strand, within BACOVA_02467at 230.035 kb on - strand, within BACOVA_02467at 230.036 kb on + strand, within BACOVA_02467at 230.036 kb on + strand, within BACOVA_02467at 230.066 kb on - strand, within BACOVA_02467at 230.066 kb on - strand, within BACOVA_02467at 230.066 kb on - strand, within BACOVA_02467at 230.228 kb on + strand, within BACOVA_02467at 230.237 kb on + strand, within BACOVA_02467at 230.249 kb on + strand, within BACOVA_02467at 230.259 kb on - strand, within BACOVA_02467at 230.266 kb on + strand, within BACOVA_02467at 230.292 kb on + strand, within BACOVA_02467at 230.293 kb on - strand, within BACOVA_02467at 230.293 kb on - strand, within BACOVA_02467at 230.300 kb on - strand, within BACOVA_02467at 230.326 kb on - strand, within BACOVA_02467at 230.333 kb on + strand, within BACOVA_02467at 230.338 kb on + strand, within BACOVA_02467at 230.339 kb on - strand, within BACOVA_02467at 230.339 kb on - strand, within BACOVA_02467at 230.355 kb on - strand, within BACOVA_02467at 230.426 kb on - strand, within BACOVA_02467at 230.426 kb on - strand, within BACOVA_02467at 230.426 kb on - strand, within BACOVA_02467at 230.426 kb on - strand, within BACOVA_02467at 230.430 kb on - strand, within BACOVA_02467at 230.430 kb on - strand, within BACOVA_02467at 230.430 kb on - strand, within BACOVA_02467at 230.431 kb on + strand, within BACOVA_02467at 230.452 kb on + strand, within BACOVA_02467at 230.484 kb on - strand, within BACOVA_02467at 230.487 kb on - strand, within BACOVA_02467at 230.549 kb on - strand, within BACOVA_02467at 230.549 kb on - strand, within BACOVA_02467at 230.598 kb on - strand, within BACOVA_02467at 230.598 kb on - strand, within BACOVA_02467at 230.599 kb on + strand, within BACOVA_02467at 230.600 kb on - strand, within BACOVA_02467at 230.620 kb on - strand, within BACOVA_02467at 230.695 kb on - strand, within BACOVA_02467at 230.709 kb on - strand, within BACOVA_02467at 230.709 kb on - strand, within BACOVA_02467at 230.772 kb on - strand, within BACOVA_02467at 230.820 kb on - strandat 230.854 kb on - strandat 230.908 kb on + strandat 230.914 kb on - strandat 230.953 kb on - strandat 230.981 kb on - strandat 231.072 kb on - strand, within BACOVA_02468at 231.078 kb on - strand, within BACOVA_02468at 231.078 kb on - strand, within BACOVA_02468at 231.120 kb on - strand, within BACOVA_02468at 231.120 kb on - strand, within BACOVA_02468at 231.140 kb on - strand, within BACOVA_02468at 231.151 kb on - strand, within BACOVA_02468at 231.161 kb on - strand, within BACOVA_02468at 231.206 kb on + strand, within BACOVA_02468at 231.219 kb on + strand, within BACOVA_02468at 231.220 kb on - strand, within BACOVA_02468at 231.220 kb on - strand, within BACOVA_02468at 231.262 kb on - strand, within BACOVA_02468at 231.323 kb on - strand, within BACOVA_02468at 231.326 kb on + strand, within BACOVA_02468at 231.353 kb on - strand, within BACOVA_02468at 231.353 kb on - strand, within BACOVA_02468at 231.379 kb on - strand, within BACOVA_02468at 231.422 kb on - strand, within BACOVA_02468at 231.429 kb on - strand, within BACOVA_02468at 231.429 kb on - strand, within BACOVA_02468at 231.437 kb on - strand, within BACOVA_02468at 231.437 kb on - strand, within BACOVA_02468at 231.437 kb on - strand, within BACOVA_02468at 231.437 kb on - strand, within BACOVA_02468at 231.467 kb on + strand, within BACOVA_02468at 231.513 kb on - strand, within BACOVA_02468at 231.584 kb on + strand, within BACOVA_02468at 231.585 kb on - strand, within BACOVA_02468at 231.591 kb on - strand, within BACOVA_02468at 231.591 kb on - strand, within BACOVA_02468at 231.613 kb on - strand, within BACOVA_02468at 231.638 kb on + strand, within BACOVA_02468at 231.638 kb on + strand, within BACOVA_02468at 231.639 kb on - strand, within BACOVA_02468at 231.643 kb on - strand, within BACOVA_02468at 231.689 kb on - strand, within BACOVA_02468at 231.735 kb on - strand, within BACOVA_02468at 231.735 kb on - strand, within BACOVA_02468at 231.819 kb on - strand, within BACOVA_02468at 231.823 kb on - strandat 231.848 kb on - strandat 231.858 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C)
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228,969 - BACOVA_02466 0.18 +0.4
228,969 - BACOVA_02466 0.18 +0.4
228,984 - BACOVA_02466 0.20 +1.8
228,990 - BACOVA_02466 0.20 -1.4
229,004 - BACOVA_02466 0.22 -0.8
229,020 - BACOVA_02466 0.23 +1.2
229,047 + BACOVA_02466 0.25 -0.8
229,059 - BACOVA_02466 0.26 +0.7
229,059 - BACOVA_02466 0.26 +1.7
229,062 - BACOVA_02466 0.27 +2.5
229,066 - BACOVA_02466 0.27 +0.6
229,066 - BACOVA_02466 0.27 +1.0
229,114 - BACOVA_02466 0.31 +0.3
229,114 - BACOVA_02466 0.31 +1.2
229,116 - BACOVA_02466 0.32 +1.1
229,148 - BACOVA_02466 0.34 +0.5
229,152 - BACOVA_02466 0.35 -1.0
229,154 - BACOVA_02466 0.35 +0.1
229,161 - BACOVA_02466 0.36 +0.1
229,176 - BACOVA_02466 0.37 +0.8
229,185 - BACOVA_02466 0.38 +1.9
229,185 - BACOVA_02466 0.38 +1.1
229,218 - BACOVA_02466 0.41 -0.5
229,218 - BACOVA_02466 0.41 +0.4
229,227 - BACOVA_02466 0.41 +1.3
229,289 - BACOVA_02466 0.47 +0.7
229,314 - BACOVA_02466 0.49 -0.7
229,338 - BACOVA_02466 0.51 +0.3
229,338 - BACOVA_02466 0.51 +0.8
229,362 - BACOVA_02466 0.53 +1.3
229,368 - BACOVA_02466 0.54 -0.1
229,368 - BACOVA_02466 0.54 +1.0
229,412 - BACOVA_02466 0.58 +0.2
229,412 - BACOVA_02466 0.58 +2.2
229,457 + BACOVA_02466 0.62 +4.2
229,458 - BACOVA_02466 0.62 +0.2
229,464 - BACOVA_02466 0.63 +0.7
229,515 - BACOVA_02466 0.67 +1.2
229,517 - BACOVA_02466 0.67 +1.8
229,536 - BACOVA_02466 0.69 -0.6
229,555 + BACOVA_02466 0.71 +2.1
229,556 - BACOVA_02466 0.71 +1.7
229,556 - BACOVA_02466 0.71 -0.5
229,595 - BACOVA_02466 0.74 -0.2
229,629 - BACOVA_02466 0.77 +1.1
229,647 - BACOVA_02466 0.79 -0.2
229,661 - BACOVA_02466 0.80 -0.1
229,749 - BACOVA_02466 0.88 +1.8
229,761 - BACOVA_02466 0.89 +0.0
229,761 - BACOVA_02466 0.89 +0.3
229,761 - BACOVA_02466 0.89 +1.8
229,765 - BACOVA_02466 0.89 +1.3
229,765 - BACOVA_02466 0.89 -2.4
229,779 - -0.8
229,779 - +2.3
229,782 - +1.4
229,849 - -1.9
229,849 - +0.4
229,871 - -0.2
229,882 - +1.2
229,925 + +0.5
229,926 - +3.1
229,929 - +2.3
229,929 - +2.8
229,929 - -0.4
229,948 + +1.9
229,949 - +0.0
229,949 - -1.0
229,961 + -0.1
229,961 + -1.0
229,961 + -0.1
229,961 + +2.3
229,966 - -0.8
230,030 + BACOVA_02467 0.13 -0.3
230,031 - BACOVA_02467 0.13 +1.6
230,031 - BACOVA_02467 0.13 +1.6
230,033 - BACOVA_02467 0.13 +0.4
230,035 - BACOVA_02467 0.13 -0.2
230,035 - BACOVA_02467 0.13 -1.2
230,036 + BACOVA_02467 0.14 +2.7
230,036 + BACOVA_02467 0.14 +1.7
230,066 - BACOVA_02467 0.17 -0.6
230,066 - BACOVA_02467 0.17 -1.5
230,066 - BACOVA_02467 0.17 +2.1
230,228 + BACOVA_02467 0.33 -0.5
230,237 + BACOVA_02467 0.34 -0.5
230,249 + BACOVA_02467 0.35 +1.1
230,259 - BACOVA_02467 0.36 +3.2
230,266 + BACOVA_02467 0.37 +0.2
230,292 + BACOVA_02467 0.40 -0.3
230,293 - BACOVA_02467 0.40 +0.3
230,293 - BACOVA_02467 0.40 +0.8
230,300 - BACOVA_02467 0.40 +0.6
230,326 - BACOVA_02467 0.43 -2.6
230,333 + BACOVA_02467 0.44 -0.1
230,338 + BACOVA_02467 0.44 -0.5
230,339 - BACOVA_02467 0.44 -0.0
230,339 - BACOVA_02467 0.44 +0.5
230,355 - BACOVA_02467 0.46 +0.0
230,426 - BACOVA_02467 0.53 +0.5
230,426 - BACOVA_02467 0.53 -0.8
230,426 - BACOVA_02467 0.53 +0.9
230,426 - BACOVA_02467 0.53 +0.4
230,430 - BACOVA_02467 0.53 -1.2
230,430 - BACOVA_02467 0.53 +1.7
230,430 - BACOVA_02467 0.53 +0.8
230,431 + BACOVA_02467 0.54 -0.1
230,452 + BACOVA_02467 0.56 -0.8
230,484 - BACOVA_02467 0.59 +0.3
230,487 - BACOVA_02467 0.59 +1.3
230,549 - BACOVA_02467 0.66 -0.8
230,549 - BACOVA_02467 0.66 -0.7
230,598 - BACOVA_02467 0.71 -1.8
230,598 - BACOVA_02467 0.71 +0.3
230,599 + BACOVA_02467 0.71 -1.1
230,600 - BACOVA_02467 0.71 +1.4
230,620 - BACOVA_02467 0.73 +0.9
230,695 - BACOVA_02467 0.80 -0.7
230,709 - BACOVA_02467 0.82 +1.0
230,709 - BACOVA_02467 0.82 -0.7
230,772 - BACOVA_02467 0.88 +0.9
230,820 - -1.1
230,854 - +1.4
230,908 + +2.1
230,914 - +0.2
230,953 - +0.5
230,981 - +2.4
231,072 - BACOVA_02468 0.18 +0.7
231,078 - BACOVA_02468 0.18 -0.2
231,078 - BACOVA_02468 0.18 -0.1
231,120 - BACOVA_02468 0.22 +0.8
231,120 - BACOVA_02468 0.22 +1.7
231,140 - BACOVA_02468 0.24 +1.3
231,151 - BACOVA_02468 0.25 +0.2
231,161 - BACOVA_02468 0.26 +1.0
231,206 + BACOVA_02468 0.31 -0.3
231,219 + BACOVA_02468 0.32 -0.3
231,220 - BACOVA_02468 0.32 -2.7
231,220 - BACOVA_02468 0.32 +1.6
231,262 - BACOVA_02468 0.36 +1.2
231,323 - BACOVA_02468 0.42 -0.4
231,326 + BACOVA_02468 0.42 +0.2
231,353 - BACOVA_02468 0.45 -1.2
231,353 - BACOVA_02468 0.45 +1.9
231,379 - BACOVA_02468 0.47 +1.5
231,422 - BACOVA_02468 0.51 +2.4
231,429 - BACOVA_02468 0.52 +1.4
231,429 - BACOVA_02468 0.52 +1.7
231,437 - BACOVA_02468 0.53 +1.0
231,437 - BACOVA_02468 0.53 +1.0
231,437 - BACOVA_02468 0.53 +0.9
231,437 - BACOVA_02468 0.53 +0.9
231,467 + BACOVA_02468 0.56 -0.1
231,513 - BACOVA_02468 0.60 +1.0
231,584 + BACOVA_02468 0.67 +1.4
231,585 - BACOVA_02468 0.67 +0.2
231,591 - BACOVA_02468 0.68 -0.1
231,591 - BACOVA_02468 0.68 -0.6
231,613 - BACOVA_02468 0.70 +1.7
231,638 + BACOVA_02468 0.72 +0.5
231,638 + BACOVA_02468 0.72 +1.6
231,639 - BACOVA_02468 0.72 -0.5
231,643 - BACOVA_02468 0.73 +1.7
231,689 - BACOVA_02468 0.77 +1.6
231,735 - BACOVA_02468 0.82 -0.4
231,735 - BACOVA_02468 0.82 -1.0
231,819 - BACOVA_02468 0.90 -1.5
231,823 - +2.1
231,848 - +0.9
231,858 - -1.1

Or see this region's nucleotide sequence