Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02460 and BACOVA_02461 are separated by 1 nucleotides BACOVA_02461 and BACOVA_02462 overlap by 4 nucleotides
BACOVA_02460: BACOVA_02460 - 4Fe-4S binding domain protein, at 222,332 to 223,480
_02460
BACOVA_02461: BACOVA_02461 - hypothetical protein, at 223,482 to 224,564
_02461
BACOVA_02462: BACOVA_02462 - hypothetical protein, at 224,561 to 225,760
_02462
Position (kb) 223
224
225 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 222.814 kb on + strand, within BACOVA_02460 at 222.850 kb on - strand, within BACOVA_02460 at 222.850 kb on - strand, within BACOVA_02460 at 223.039 kb on + strand, within BACOVA_02460 at 223.039 kb on + strand, within BACOVA_02460 at 223.039 kb on + strand, within BACOVA_02460 at 223.040 kb on - strand, within BACOVA_02460 at 223.040 kb on - strand, within BACOVA_02460 at 223.046 kb on - strand, within BACOVA_02460 at 223.051 kb on + strand, within BACOVA_02460 at 223.052 kb on - strand, within BACOVA_02460 at 223.059 kb on + strand, within BACOVA_02460 at 223.065 kb on + strand, within BACOVA_02460 at 223.065 kb on + strand, within BACOVA_02460 at 223.070 kb on + strand, within BACOVA_02460 at 223.118 kb on - strand, within BACOVA_02460 at 223.121 kb on + strand, within BACOVA_02460 at 223.191 kb on - strand, within BACOVA_02460 at 223.226 kb on - strand, within BACOVA_02460 at 223.226 kb on - strand, within BACOVA_02460 at 223.271 kb on + strand, within BACOVA_02460 at 223.282 kb on + strand, within BACOVA_02460 at 223.294 kb on - strand, within BACOVA_02460 at 223.294 kb on - strand, within BACOVA_02460 at 223.294 kb on - strand, within BACOVA_02460 at 223.341 kb on + strand, within BACOVA_02460 at 223.342 kb on - strand, within BACOVA_02460 at 223.448 kb on - strand at 223.482 kb on - strand at 223.490 kb on - strand at 223.490 kb on - strand at 223.522 kb on - strand at 223.550 kb on - strand at 223.550 kb on - strand at 223.550 kb on - strand at 223.550 kb on - strand at 223.557 kb on + strand at 223.558 kb on - strand at 223.576 kb on - strand at 223.592 kb on - strand, within BACOVA_02461 at 223.597 kb on - strand, within BACOVA_02461 at 223.613 kb on - strand, within BACOVA_02461 at 223.616 kb on + strand, within BACOVA_02461 at 223.617 kb on - strand, within BACOVA_02461 at 223.617 kb on - strand, within BACOVA_02461 at 223.617 kb on - strand, within BACOVA_02461 at 223.628 kb on + strand, within BACOVA_02461 at 223.629 kb on - strand, within BACOVA_02461 at 223.629 kb on - strand, within BACOVA_02461 at 223.629 kb on - strand, within BACOVA_02461 at 223.659 kb on - strand, within BACOVA_02461 at 223.659 kb on - strand, within BACOVA_02461 at 223.746 kb on - strand, within BACOVA_02461 at 223.757 kb on - strand, within BACOVA_02461 at 223.757 kb on - strand, within BACOVA_02461 at 223.779 kb on - strand, within BACOVA_02461 at 223.806 kb on + strand, within BACOVA_02461 at 223.807 kb on - strand, within BACOVA_02461 at 223.812 kb on - strand, within BACOVA_02461 at 223.814 kb on - strand, within BACOVA_02461 at 223.908 kb on - strand, within BACOVA_02461 at 223.915 kb on - strand, within BACOVA_02461 at 223.922 kb on + strand, within BACOVA_02461 at 223.923 kb on - strand, within BACOVA_02461 at 223.923 kb on - strand, within BACOVA_02461 at 223.976 kb on - strand, within BACOVA_02461 at 223.995 kb on - strand, within BACOVA_02461 at 224.041 kb on + strand, within BACOVA_02461 at 224.041 kb on + strand, within BACOVA_02461 at 224.081 kb on - strand, within BACOVA_02461 at 224.108 kb on - strand, within BACOVA_02461 at 224.112 kb on - strand, within BACOVA_02461 at 224.150 kb on - strand, within BACOVA_02461 at 224.150 kb on - strand, within BACOVA_02461 at 224.150 kb on - strand, within BACOVA_02461 at 224.193 kb on - strand, within BACOVA_02461 at 224.193 kb on - strand, within BACOVA_02461 at 224.197 kb on - strand, within BACOVA_02461 at 224.231 kb on - strand, within BACOVA_02461 at 224.387 kb on - strand, within BACOVA_02461 at 224.433 kb on - strand, within BACOVA_02461 at 224.460 kb on - strand at 224.460 kb on - strand at 224.465 kb on - strand at 224.541 kb on - strand at 224.541 kb on - strand at 224.541 kb on - strand at 224.555 kb on - strand at 224.555 kb on - strand at 224.575 kb on - strand at 224.610 kb on + strand at 224.614 kb on - strand at 224.617 kb on - strand at 224.617 kb on - strand at 224.620 kb on - strand at 224.665 kb on + strand at 224.666 kb on - strand at 224.666 kb on - strand at 224.670 kb on - strand at 224.674 kb on - strand at 224.674 kb on - strand at 224.674 kb on - strand at 224.706 kb on - strand, within BACOVA_02462 at 224.708 kb on + strand, within BACOVA_02462 at 224.727 kb on - strand, within BACOVA_02462 at 224.756 kb on - strand, within BACOVA_02462 at 224.767 kb on - strand, within BACOVA_02462 at 224.787 kb on - strand, within BACOVA_02462 at 224.787 kb on - strand, within BACOVA_02462 at 224.787 kb on - strand, within BACOVA_02462 at 224.792 kb on - strand, within BACOVA_02462 at 224.826 kb on - strand, within BACOVA_02462 at 224.827 kb on + strand, within BACOVA_02462 at 224.830 kb on + strand, within BACOVA_02462 at 224.831 kb on - strand, within BACOVA_02462 at 224.833 kb on - strand, within BACOVA_02462 at 224.840 kb on - strand, within BACOVA_02462 at 224.870 kb on + strand, within BACOVA_02462 at 224.882 kb on - strand, within BACOVA_02462 at 224.941 kb on - strand, within BACOVA_02462 at 224.941 kb on - strand, within BACOVA_02462 at 224.976 kb on + strand, within BACOVA_02462 at 224.981 kb on - strand, within BACOVA_02462 at 225.005 kb on - strand, within BACOVA_02462 at 225.007 kb on - strand, within BACOVA_02462 at 225.007 kb on - strand, within BACOVA_02462 at 225.007 kb on - strand, within BACOVA_02462 at 225.063 kb on - strand, within BACOVA_02462 at 225.105 kb on - strand, within BACOVA_02462 at 225.107 kb on - strand, within BACOVA_02462 at 225.107 kb on - strand, within BACOVA_02462 at 225.137 kb on - strand, within BACOVA_02462 at 225.193 kb on - strand, within BACOVA_02462 at 225.202 kb on - strand, within BACOVA_02462 at 225.202 kb on - strand, within BACOVA_02462 at 225.263 kb on + strand, within BACOVA_02462 at 225.264 kb on - strand, within BACOVA_02462 at 225.347 kb on - strand, within BACOVA_02462 at 225.353 kb on + strand, within BACOVA_02462 at 225.356 kb on - strand, within BACOVA_02462 at 225.358 kb on + strand, within BACOVA_02462 at 225.359 kb on - strand, within BACOVA_02462 at 225.363 kb on - strand, within BACOVA_02462 at 225.396 kb on - strand, within BACOVA_02462 at 225.433 kb on - strand, within BACOVA_02462 at 225.504 kb on - strand, within BACOVA_02462 at 225.504 kb on - strand, within BACOVA_02462 at 225.527 kb on - strand, within BACOVA_02462 at 225.527 kb on - strand, within BACOVA_02462 at 225.544 kb on - strand, within BACOVA_02462
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 222,814 + BACOVA_02460 0.42 +2.2 222,850 - BACOVA_02460 0.45 +1.0 222,850 - BACOVA_02460 0.45 -0.7 223,039 + BACOVA_02460 0.62 -0.0 223,039 + BACOVA_02460 0.62 -0.7 223,039 + BACOVA_02460 0.62 +0.9 223,040 - BACOVA_02460 0.62 +0.7 223,040 - BACOVA_02460 0.62 +2.2 223,046 - BACOVA_02460 0.62 +1.9 223,051 + BACOVA_02460 0.63 +1.8 223,052 - BACOVA_02460 0.63 +0.7 223,059 + BACOVA_02460 0.63 +1.2 223,065 + BACOVA_02460 0.64 -0.2 223,065 + BACOVA_02460 0.64 +0.6 223,070 + BACOVA_02460 0.64 -0.7 223,118 - BACOVA_02460 0.68 -0.1 223,121 + BACOVA_02460 0.69 +0.5 223,191 - BACOVA_02460 0.75 +0.7 223,226 - BACOVA_02460 0.78 +0.8 223,226 - BACOVA_02460 0.78 -1.3 223,271 + BACOVA_02460 0.82 +0.7 223,282 + BACOVA_02460 0.83 +1.5 223,294 - BACOVA_02460 0.84 +0.4 223,294 - BACOVA_02460 0.84 +1.0 223,294 - BACOVA_02460 0.84 +1.8 223,341 + BACOVA_02460 0.88 -0.1 223,342 - BACOVA_02460 0.88 +1.9 223,448 - +0.5 223,482 - +0.4 223,490 - +2.0 223,490 - +0.1 223,522 - +2.0 223,550 - +0.7 223,550 - +2.4 223,550 - +0.9 223,550 - +1.4 223,557 + +0.9 223,558 - -0.2 223,576 - +1.0 223,592 - BACOVA_02461 0.10 +0.7 223,597 - BACOVA_02461 0.11 +0.9 223,613 - BACOVA_02461 0.12 +0.7 223,616 + BACOVA_02461 0.12 -1.3 223,617 - BACOVA_02461 0.12 +0.2 223,617 - BACOVA_02461 0.12 +1.7 223,617 - BACOVA_02461 0.12 +0.6 223,628 + BACOVA_02461 0.13 -0.7 223,629 - BACOVA_02461 0.14 +1.8 223,629 - BACOVA_02461 0.14 +1.7 223,629 - BACOVA_02461 0.14 +0.5 223,659 - BACOVA_02461 0.16 +1.8 223,659 - BACOVA_02461 0.16 -0.5 223,746 - BACOVA_02461 0.24 +1.7 223,757 - BACOVA_02461 0.25 +0.4 223,757 - BACOVA_02461 0.25 -0.0 223,779 - BACOVA_02461 0.27 +2.0 223,806 + BACOVA_02461 0.30 +0.2 223,807 - BACOVA_02461 0.30 +1.3 223,812 - BACOVA_02461 0.30 +0.6 223,814 - BACOVA_02461 0.31 -1.0 223,908 - BACOVA_02461 0.39 +0.2 223,915 - BACOVA_02461 0.40 -0.3 223,922 + BACOVA_02461 0.41 +0.3 223,923 - BACOVA_02461 0.41 +1.7 223,923 - BACOVA_02461 0.41 +1.4 223,976 - BACOVA_02461 0.46 +0.6 223,995 - BACOVA_02461 0.47 -0.1 224,041 + BACOVA_02461 0.52 -0.3 224,041 + BACOVA_02461 0.52 +1.9 224,081 - BACOVA_02461 0.55 +1.9 224,108 - BACOVA_02461 0.58 -0.6 224,112 - BACOVA_02461 0.58 +1.5 224,150 - BACOVA_02461 0.62 -0.3 224,150 - BACOVA_02461 0.62 +0.3 224,150 - BACOVA_02461 0.62 +2.9 224,193 - BACOVA_02461 0.66 +1.8 224,193 - BACOVA_02461 0.66 -1.9 224,197 - BACOVA_02461 0.66 -0.3 224,231 - BACOVA_02461 0.69 +0.4 224,387 - BACOVA_02461 0.84 -0.1 224,433 - BACOVA_02461 0.88 +0.2 224,460 - -0.5 224,460 - +0.4 224,465 - +0.9 224,541 - +1.8 224,541 - -1.1 224,541 - +1.2 224,555 - +0.6 224,555 - +0.5 224,575 - +0.8 224,610 + -1.7 224,614 - +1.8 224,617 - +1.1 224,617 - +0.4 224,620 - +1.3 224,665 + -0.8 224,666 - -0.5 224,666 - -1.6 224,670 - -0.8 224,674 - +0.2 224,674 - -0.2 224,674 - +2.5 224,706 - BACOVA_02462 0.12 +0.1 224,708 + BACOVA_02462 0.12 -0.5 224,727 - BACOVA_02462 0.14 +2.5 224,756 - BACOVA_02462 0.16 -1.2 224,767 - BACOVA_02462 0.17 +0.2 224,787 - BACOVA_02462 0.19 +1.1 224,787 - BACOVA_02462 0.19 +2.1 224,787 - BACOVA_02462 0.19 +1.5 224,792 - BACOVA_02462 0.19 +2.3 224,826 - BACOVA_02462 0.22 +0.6 224,827 + BACOVA_02462 0.22 -1.3 224,830 + BACOVA_02462 0.22 +0.5 224,831 - BACOVA_02462 0.23 +0.2 224,833 - BACOVA_02462 0.23 -0.1 224,840 - BACOVA_02462 0.23 +0.0 224,870 + BACOVA_02462 0.26 +0.4 224,882 - BACOVA_02462 0.27 +0.2 224,941 - BACOVA_02462 0.32 -1.4 224,941 - BACOVA_02462 0.32 +1.1 224,976 + BACOVA_02462 0.35 -0.5 224,981 - BACOVA_02462 0.35 +0.9 225,005 - BACOVA_02462 0.37 +1.7 225,007 - BACOVA_02462 0.37 -2.8 225,007 - BACOVA_02462 0.37 +2.2 225,007 - BACOVA_02462 0.37 +0.6 225,063 - BACOVA_02462 0.42 +0.6 225,105 - BACOVA_02462 0.45 +0.1 225,107 - BACOVA_02462 0.46 +1.8 225,107 - BACOVA_02462 0.46 +1.9 225,137 - BACOVA_02462 0.48 +1.8 225,193 - BACOVA_02462 0.53 -0.1 225,202 - BACOVA_02462 0.53 +0.8 225,202 - BACOVA_02462 0.53 -0.7 225,263 + BACOVA_02462 0.58 -1.0 225,264 - BACOVA_02462 0.59 +1.3 225,347 - BACOVA_02462 0.66 +1.4 225,353 + BACOVA_02462 0.66 +0.8 225,356 - BACOVA_02462 0.66 +1.3 225,358 + BACOVA_02462 0.66 +1.4 225,359 - BACOVA_02462 0.67 +1.5 225,363 - BACOVA_02462 0.67 +1.3 225,396 - BACOVA_02462 0.70 +1.6 225,433 - BACOVA_02462 0.73 +1.7 225,504 - BACOVA_02462 0.79 -0.1 225,504 - BACOVA_02462 0.79 +0.9 225,527 - BACOVA_02462 0.81 +2.2 225,527 - BACOVA_02462 0.81 +0.2 225,544 - BACOVA_02462 0.82 +1.6
Or see this region's nucleotide sequence