Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02451 and BACOVA_02452 are separated by 47 nucleotides BACOVA_02452 and BACOVA_02453 are separated by 23 nucleotides BACOVA_02453 and BACOVA_02454 are separated by 228 nucleotides BACOVA_02454 and BACOVA_02455 are separated by 131 nucleotides
BACOVA_02451: BACOVA_02451 - hypothetical protein, at 215,948 to 216,328
_02451
BACOVA_02452: BACOVA_02452 - hypothetical protein, at 216,376 to 216,726
_02452
BACOVA_02453: BACOVA_02453 - hypothetical protein, at 216,750 to 217,094
_02453
BACOVA_02454: BACOVA_02454 - hypothetical protein, at 217,323 to 217,733
_02454
BACOVA_02455: BACOVA_02455 - site-specific recombinase, phage integrase family, at 217,865 to 218,818
_02455
Position (kb) 217
218 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 216.698 kb on + strand at 216.715 kb on - strand at 216.721 kb on - strand at 216.736 kb on + strand at 216.758 kb on + strand at 216.759 kb on - strand at 216.830 kb on + strand, within BACOVA_02453 at 216.943 kb on - strand, within BACOVA_02453 at 217.034 kb on + strand, within BACOVA_02453 at 217.051 kb on - strand, within BACOVA_02453 at 217.051 kb on - strand, within BACOVA_02453 at 217.166 kb on + strand at 217.167 kb on - strand at 217.199 kb on + strand at 217.218 kb on + strand at 217.288 kb on + strand at 217.324 kb on + strand at 217.324 kb on + strand at 217.425 kb on + strand, within BACOVA_02454 at 217.425 kb on + strand, within BACOVA_02454 at 217.425 kb on + strand, within BACOVA_02454 at 217.426 kb on - strand, within BACOVA_02454 at 217.426 kb on - strand, within BACOVA_02454 at 217.427 kb on + strand, within BACOVA_02454 at 217.472 kb on - strand, within BACOVA_02454 at 217.489 kb on + strand, within BACOVA_02454 at 217.493 kb on + strand, within BACOVA_02454 at 217.493 kb on + strand, within BACOVA_02454 at 217.494 kb on - strand, within BACOVA_02454 at 217.526 kb on + strand, within BACOVA_02454 at 217.527 kb on - strand, within BACOVA_02454 at 217.560 kb on + strand, within BACOVA_02454 at 217.560 kb on + strand, within BACOVA_02454 at 217.564 kb on + strand, within BACOVA_02454 at 217.565 kb on - strand, within BACOVA_02454 at 217.565 kb on - strand, within BACOVA_02454 at 217.577 kb on - strand, within BACOVA_02454 at 217.602 kb on + strand, within BACOVA_02454 at 217.703 kb on + strand at 217.768 kb on + strand at 217.780 kb on + strand at 217.780 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 216,698 + -1.3 216,715 - +1.0 216,721 - +0.6 216,736 + +0.7 216,758 + -1.7 216,759 - -1.0 216,830 + BACOVA_02453 0.23 +1.1 216,943 - BACOVA_02453 0.56 -0.4 217,034 + BACOVA_02453 0.82 +1.5 217,051 - BACOVA_02453 0.87 +1.9 217,051 - BACOVA_02453 0.87 -1.4 217,166 + -0.6 217,167 - -0.3 217,199 + -1.2 217,218 + +0.9 217,288 + -0.1 217,324 + -2.6 217,324 + +1.2 217,425 + BACOVA_02454 0.25 -1.3 217,425 + BACOVA_02454 0.25 -0.6 217,425 + BACOVA_02454 0.25 +0.8 217,426 - BACOVA_02454 0.25 -0.7 217,426 - BACOVA_02454 0.25 -0.8 217,427 + BACOVA_02454 0.25 -1.5 217,472 - BACOVA_02454 0.36 -1.0 217,489 + BACOVA_02454 0.40 -2.1 217,493 + BACOVA_02454 0.41 +1.7 217,493 + BACOVA_02454 0.41 -0.1 217,494 - BACOVA_02454 0.42 +0.7 217,526 + BACOVA_02454 0.49 -0.9 217,527 - BACOVA_02454 0.50 +3.0 217,560 + BACOVA_02454 0.58 -0.3 217,560 + BACOVA_02454 0.58 -1.5 217,564 + BACOVA_02454 0.59 -0.8 217,565 - BACOVA_02454 0.59 +0.2 217,565 - BACOVA_02454 0.59 +1.2 217,577 - BACOVA_02454 0.62 -0.7 217,602 + BACOVA_02454 0.68 -0.2 217,703 + +0.3 217,768 + +0.2 217,780 + -2.1 217,780 + +0.3
Or see this region's nucleotide sequence