Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02434 and BACOVA_02436 are separated by 139 nucleotides BACOVA_02436 and BACOVA_02437 are separated by 81 nucleotides BACOVA_02437 and BACOVA_02438 are separated by 23 nucleotides
BACOVA_02434: BACOVA_02434 - NAD dependent epimerase/dehydratase family protein, at 198,931 to 199,938
_02434
BACOVA_02436: BACOVA_02436 - hypothetical protein, at 200,078 to 200,626
_02436
BACOVA_02437: BACOVA_02437 - hypothetical protein, at 200,708 to 201,481
_02437
BACOVA_02438: BACOVA_02438 - response regulator receiver domain protein, at 201,505 to 202,200
_02438
Position (kb) 200
201 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 199.118 kb on - strand, within BACOVA_02434 at 199.160 kb on + strand, within BACOVA_02434 at 199.160 kb on + strand, within BACOVA_02434 at 199.161 kb on - strand, within BACOVA_02434 at 199.170 kb on + strand, within BACOVA_02434 at 199.189 kb on - strand, within BACOVA_02434 at 199.201 kb on + strand, within BACOVA_02434 at 199.311 kb on - strand, within BACOVA_02434 at 199.383 kb on + strand, within BACOVA_02434 at 199.383 kb on + strand, within BACOVA_02434 at 199.383 kb on + strand, within BACOVA_02434 at 199.387 kb on + strand, within BACOVA_02434 at 199.387 kb on + strand, within BACOVA_02434 at 199.390 kb on - strand, within BACOVA_02434 at 199.425 kb on + strand, within BACOVA_02434 at 199.602 kb on + strand, within BACOVA_02434 at 199.603 kb on - strand, within BACOVA_02434 at 199.603 kb on - strand, within BACOVA_02434 at 199.671 kb on - strand, within BACOVA_02434 at 199.758 kb on + strand, within BACOVA_02434 at 199.770 kb on - strand, within BACOVA_02434 at 199.791 kb on + strand, within BACOVA_02434 at 199.792 kb on - strand, within BACOVA_02434 at 199.792 kb on - strand, within BACOVA_02434 at 199.792 kb on - strand, within BACOVA_02434 at 199.800 kb on + strand, within BACOVA_02434 at 199.800 kb on + strand, within BACOVA_02434 at 199.800 kb on + strand, within BACOVA_02434 at 199.832 kb on + strand, within BACOVA_02434 at 199.837 kb on + strand, within BACOVA_02434 at 199.838 kb on - strand at 199.899 kb on + strand at 199.900 kb on - strand at 199.973 kb on - strand at 200.052 kb on - strand at 200.052 kb on - strand at 200.057 kb on + strand at 200.057 kb on + strand at 200.073 kb on - strand at 200.080 kb on - strand at 200.082 kb on + strand at 200.186 kb on - strand, within BACOVA_02436 at 200.197 kb on + strand, within BACOVA_02436 at 200.233 kb on - strand, within BACOVA_02436 at 200.236 kb on + strand, within BACOVA_02436 at 200.237 kb on - strand, within BACOVA_02436 at 200.282 kb on - strand, within BACOVA_02436 at 200.382 kb on + strand, within BACOVA_02436 at 200.383 kb on - strand, within BACOVA_02436 at 200.383 kb on - strand, within BACOVA_02436 at 200.386 kb on + strand, within BACOVA_02436 at 200.386 kb on + strand, within BACOVA_02436 at 200.389 kb on + strand, within BACOVA_02436 at 200.389 kb on + strand, within BACOVA_02436 at 200.434 kb on + strand, within BACOVA_02436 at 200.440 kb on + strand, within BACOVA_02436 at 200.441 kb on - strand, within BACOVA_02436 at 200.445 kb on - strand, within BACOVA_02436 at 200.450 kb on - strand, within BACOVA_02436 at 200.474 kb on + strand, within BACOVA_02436 at 200.474 kb on + strand, within BACOVA_02436 at 200.521 kb on + strand, within BACOVA_02436 at 200.528 kb on - strand, within BACOVA_02436 at 200.545 kb on + strand, within BACOVA_02436 at 200.591 kb on + strand at 200.592 kb on - strand at 200.594 kb on + strand at 200.633 kb on - strand at 200.659 kb on + strand at 200.722 kb on + strand at 200.723 kb on - strand at 200.775 kb on + strand at 200.775 kb on + strand at 200.776 kb on - strand at 200.788 kb on + strand, within BACOVA_02437 at 200.789 kb on - strand, within BACOVA_02437 at 200.809 kb on - strand, within BACOVA_02437 at 200.857 kb on - strand, within BACOVA_02437 at 200.860 kb on + strand, within BACOVA_02437 at 200.861 kb on - strand, within BACOVA_02437 at 200.966 kb on - strand, within BACOVA_02437 at 201.012 kb on + strand, within BACOVA_02437 at 201.067 kb on + strand, within BACOVA_02437 at 201.067 kb on + strand, within BACOVA_02437 at 201.068 kb on - strand, within BACOVA_02437 at 201.080 kb on + strand, within BACOVA_02437 at 201.080 kb on + strand, within BACOVA_02437 at 201.081 kb on - strand, within BACOVA_02437 at 201.108 kb on + strand, within BACOVA_02437 at 201.113 kb on - strand, within BACOVA_02437 at 201.115 kb on + strand, within BACOVA_02437 at 201.124 kb on + strand, within BACOVA_02437 at 201.125 kb on - strand, within BACOVA_02437 at 201.134 kb on + strand, within BACOVA_02437 at 201.135 kb on - strand, within BACOVA_02437 at 201.135 kb on - strand, within BACOVA_02437 at 201.135 kb on - strand, within BACOVA_02437 at 201.139 kb on - strand, within BACOVA_02437 at 201.220 kb on + strand, within BACOVA_02437 at 201.232 kb on + strand, within BACOVA_02437 at 201.232 kb on + strand, within BACOVA_02437 at 201.239 kb on - strand, within BACOVA_02437 at 201.254 kb on + strand, within BACOVA_02437 at 201.256 kb on + strand, within BACOVA_02437 at 201.256 kb on + strand, within BACOVA_02437 at 201.256 kb on + strand, within BACOVA_02437 at 201.257 kb on - strand, within BACOVA_02437 at 201.257 kb on - strand, within BACOVA_02437 at 201.257 kb on - strand, within BACOVA_02437 at 201.308 kb on + strand, within BACOVA_02437 at 201.310 kb on + strand, within BACOVA_02437 at 201.350 kb on + strand, within BACOVA_02437 at 201.434 kb on - strand at 201.506 kb on + strand at 201.523 kb on - strand at 201.549 kb on + strand at 201.549 kb on + strand at 201.553 kb on + strand at 201.554 kb on - strand at 201.554 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 199,118 - BACOVA_02434 0.19 -1.6 199,160 + BACOVA_02434 0.23 +0.1 199,160 + BACOVA_02434 0.23 -2.4 199,161 - BACOVA_02434 0.23 -1.0 199,170 + BACOVA_02434 0.24 -0.5 199,189 - BACOVA_02434 0.26 -1.5 199,201 + BACOVA_02434 0.27 -3.2 199,311 - BACOVA_02434 0.38 +0.3 199,383 + BACOVA_02434 0.45 -3.4 199,383 + BACOVA_02434 0.45 -0.1 199,383 + BACOVA_02434 0.45 -2.3 199,387 + BACOVA_02434 0.45 -1.7 199,387 + BACOVA_02434 0.45 -1.2 199,390 - BACOVA_02434 0.46 -0.6 199,425 + BACOVA_02434 0.49 -2.0 199,602 + BACOVA_02434 0.67 -1.9 199,603 - BACOVA_02434 0.67 -1.1 199,603 - BACOVA_02434 0.67 -0.4 199,671 - BACOVA_02434 0.73 -0.7 199,758 + BACOVA_02434 0.82 -2.2 199,770 - BACOVA_02434 0.83 -1.5 199,791 + BACOVA_02434 0.85 -0.2 199,792 - BACOVA_02434 0.85 -1.0 199,792 - BACOVA_02434 0.85 -1.3 199,792 - BACOVA_02434 0.85 +1.1 199,800 + BACOVA_02434 0.86 -2.6 199,800 + BACOVA_02434 0.86 -0.3 199,800 + BACOVA_02434 0.86 -1.9 199,832 + BACOVA_02434 0.89 +0.4 199,837 + BACOVA_02434 0.90 -1.3 199,838 - -1.1 199,899 + -1.5 199,900 - -3.0 199,973 - +1.6 200,052 - -0.1 200,052 - -0.1 200,057 + -1.8 200,057 + -0.3 200,073 - +0.4 200,080 - +0.1 200,082 + +1.3 200,186 - BACOVA_02436 0.20 +0.6 200,197 + BACOVA_02436 0.22 +0.4 200,233 - BACOVA_02436 0.28 +0.6 200,236 + BACOVA_02436 0.29 -0.1 200,237 - BACOVA_02436 0.29 -1.1 200,282 - BACOVA_02436 0.37 -0.5 200,382 + BACOVA_02436 0.55 -0.5 200,383 - BACOVA_02436 0.56 +0.9 200,383 - BACOVA_02436 0.56 -0.5 200,386 + BACOVA_02436 0.56 -2.1 200,386 + BACOVA_02436 0.56 +0.4 200,389 + BACOVA_02436 0.57 -1.7 200,389 + BACOVA_02436 0.57 +1.9 200,434 + BACOVA_02436 0.65 +0.1 200,440 + BACOVA_02436 0.66 -0.1 200,441 - BACOVA_02436 0.66 -1.0 200,445 - BACOVA_02436 0.67 -0.5 200,450 - BACOVA_02436 0.68 +0.5 200,474 + BACOVA_02436 0.72 +0.7 200,474 + BACOVA_02436 0.72 +1.4 200,521 + BACOVA_02436 0.81 +1.0 200,528 - BACOVA_02436 0.82 +0.7 200,545 + BACOVA_02436 0.85 -1.3 200,591 + -0.3 200,592 - +1.8 200,594 + +2.2 200,633 - -1.0 200,659 + -0.5 200,722 + +1.0 200,723 - +1.5 200,775 + -2.0 200,775 + -0.6 200,776 - -0.7 200,788 + BACOVA_02437 0.10 -2.7 200,789 - BACOVA_02437 0.10 -0.2 200,809 - BACOVA_02437 0.13 +0.2 200,857 - BACOVA_02437 0.19 -1.5 200,860 + BACOVA_02437 0.20 +0.2 200,861 - BACOVA_02437 0.20 -0.5 200,966 - BACOVA_02437 0.33 +0.1 201,012 + BACOVA_02437 0.39 +0.0 201,067 + BACOVA_02437 0.46 -1.3 201,067 + BACOVA_02437 0.46 -0.3 201,068 - BACOVA_02437 0.47 -1.9 201,080 + BACOVA_02437 0.48 +0.9 201,080 + BACOVA_02437 0.48 +0.5 201,081 - BACOVA_02437 0.48 -1.7 201,108 + BACOVA_02437 0.52 -0.1 201,113 - BACOVA_02437 0.52 +0.1 201,115 + BACOVA_02437 0.53 -0.6 201,124 + BACOVA_02437 0.54 +0.1 201,125 - BACOVA_02437 0.54 +1.2 201,134 + BACOVA_02437 0.55 +0.3 201,135 - BACOVA_02437 0.55 -0.1 201,135 - BACOVA_02437 0.55 -0.9 201,135 - BACOVA_02437 0.55 -1.3 201,139 - BACOVA_02437 0.56 +0.1 201,220 + BACOVA_02437 0.66 -1.1 201,232 + BACOVA_02437 0.68 -1.1 201,232 + BACOVA_02437 0.68 -1.2 201,239 - BACOVA_02437 0.69 -0.3 201,254 + BACOVA_02437 0.71 -1.3 201,256 + BACOVA_02437 0.71 -0.8 201,256 + BACOVA_02437 0.71 -0.9 201,256 + BACOVA_02437 0.71 +0.1 201,257 - BACOVA_02437 0.71 -1.1 201,257 - BACOVA_02437 0.71 -0.9 201,257 - BACOVA_02437 0.71 -1.3 201,308 + BACOVA_02437 0.78 -0.0 201,310 + BACOVA_02437 0.78 -0.9 201,350 + BACOVA_02437 0.83 -1.4 201,434 - +0.9 201,506 + -0.1 201,523 - +0.7 201,549 + -0.7 201,549 + -2.1 201,553 + -0.2 201,554 - +0.3 201,554 - -0.3
Or see this region's nucleotide sequence