Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02425 and BACOVA_02426 overlap by 4 nucleotides BACOVA_02426 and BACOVA_02427 are separated by 179 nucleotides BACOVA_02427 and BACOVA_02428 are separated by 133 nucleotides
BACOVA_02425: BACOVA_02425 - hypothetical protein, at 191,435 to 192,055
_02425
BACOVA_02426: BACOVA_02426 - hypothetical protein, at 192,052 to 192,309
_02426
BACOVA_02427: BACOVA_02427 - hypothetical protein, at 192,489 to 192,599
_02427
BACOVA_02428: BACOVA_02428 - putative dTDP-4-dehydrorhamnose reductase, at 192,733 to 193,644
_02428
Position (kb) 192
193 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 191.553 kb on - strand, within BACOVA_02425 at 191.748 kb on + strand, within BACOVA_02425 at 191.909 kb on - strand, within BACOVA_02425 at 191.931 kb on - strand, within BACOVA_02425 at 191.936 kb on + strand, within BACOVA_02425 at 191.942 kb on + strand, within BACOVA_02425 at 191.950 kb on - strand, within BACOVA_02425 at 191.950 kb on - strand, within BACOVA_02425 at 192.011 kb on - strand at 192.030 kb on - strand at 192.032 kb on + strand at 192.033 kb on - strand at 192.079 kb on + strand, within BACOVA_02426 at 192.264 kb on + strand, within BACOVA_02426 at 192.280 kb on + strand, within BACOVA_02426 at 192.280 kb on + strand, within BACOVA_02426 at 192.281 kb on - strand, within BACOVA_02426 at 192.336 kb on + strand at 192.337 kb on - strand at 192.337 kb on - strand at 192.338 kb on + strand at 192.434 kb on + strand at 192.572 kb on + strand, within BACOVA_02427 at 192.577 kb on - strand, within BACOVA_02427 at 192.636 kb on - strand at 192.719 kb on - strand at 192.810 kb on + strand at 192.811 kb on - strand at 192.991 kb on + strand, within BACOVA_02428 at 193.019 kb on + strand, within BACOVA_02428 at 193.019 kb on + strand, within BACOVA_02428 at 193.054 kb on + strand, within BACOVA_02428 at 193.087 kb on + strand, within BACOVA_02428 at 193.088 kb on - strand, within BACOVA_02428 at 193.094 kb on - strand, within BACOVA_02428 at 193.094 kb on - strand, within BACOVA_02428 at 193.098 kb on + strand, within BACOVA_02428 at 193.101 kb on + strand, within BACOVA_02428 at 193.102 kb on - strand, within BACOVA_02428 at 193.102 kb on - strand, within BACOVA_02428 at 193.248 kb on - strand, within BACOVA_02428 at 193.248 kb on - strand, within BACOVA_02428 at 193.249 kb on + strand, within BACOVA_02428 at 193.250 kb on - strand, within BACOVA_02428 at 193.250 kb on - strand, within BACOVA_02428 at 193.250 kb on - strand, within BACOVA_02428 at 193.369 kb on - strand, within BACOVA_02428 at 193.373 kb on + strand, within BACOVA_02428 at 193.374 kb on - strand, within BACOVA_02428 at 193.374 kb on - strand, within BACOVA_02428 at 193.374 kb on - strand, within BACOVA_02428 at 193.486 kb on + strand, within BACOVA_02428 at 193.488 kb on + strand, within BACOVA_02428 at 193.508 kb on + strand, within BACOVA_02428 at 193.532 kb on - strand, within BACOVA_02428 at 193.533 kb on + strand, within BACOVA_02428 at 193.565 kb on + strand at 193.572 kb on + strand at 193.591 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 191,553 - BACOVA_02425 0.19 +2.2 191,748 + BACOVA_02425 0.50 +2.2 191,909 - BACOVA_02425 0.76 -0.3 191,931 - BACOVA_02425 0.80 +0.7 191,936 + BACOVA_02425 0.81 +0.7 191,942 + BACOVA_02425 0.82 -0.3 191,950 - BACOVA_02425 0.83 +1.9 191,950 - BACOVA_02425 0.83 -1.1 192,011 - +1.9 192,030 - +0.9 192,032 + -0.9 192,033 - +0.9 192,079 + BACOVA_02426 0.10 -0.3 192,264 + BACOVA_02426 0.82 +0.5 192,280 + BACOVA_02426 0.88 -0.3 192,280 + BACOVA_02426 0.88 -0.5 192,281 - BACOVA_02426 0.89 +0.5 192,336 + +1.1 192,337 - -1.1 192,337 - -0.3 192,338 + +0.9 192,434 + -1.0 192,572 + BACOVA_02427 0.75 +0.5 192,577 - BACOVA_02427 0.79 -0.7 192,636 - -0.6 192,719 - -1.1 192,810 + -2.5 192,811 - -0.6 192,991 + BACOVA_02428 0.28 -1.8 193,019 + BACOVA_02428 0.31 +0.1 193,019 + BACOVA_02428 0.31 -1.2 193,054 + BACOVA_02428 0.35 +1.2 193,087 + BACOVA_02428 0.39 +0.5 193,088 - BACOVA_02428 0.39 +0.2 193,094 - BACOVA_02428 0.40 -0.3 193,094 - BACOVA_02428 0.40 +1.1 193,098 + BACOVA_02428 0.40 -0.0 193,101 + BACOVA_02428 0.40 -0.1 193,102 - BACOVA_02428 0.40 -0.5 193,102 - BACOVA_02428 0.40 -1.6 193,248 - BACOVA_02428 0.56 +0.5 193,248 - BACOVA_02428 0.56 -0.6 193,249 + BACOVA_02428 0.57 -1.7 193,250 - BACOVA_02428 0.57 -2.4 193,250 - BACOVA_02428 0.57 +0.1 193,250 - BACOVA_02428 0.57 -2.9 193,369 - BACOVA_02428 0.70 -0.5 193,373 + BACOVA_02428 0.70 -0.1 193,374 - BACOVA_02428 0.70 -0.6 193,374 - BACOVA_02428 0.70 +0.4 193,374 - BACOVA_02428 0.70 -1.0 193,486 + BACOVA_02428 0.83 -0.4 193,488 + BACOVA_02428 0.83 -0.3 193,508 + BACOVA_02428 0.85 -0.9 193,532 - BACOVA_02428 0.88 -1.3 193,533 + BACOVA_02428 0.88 +0.8 193,565 + -0.1 193,572 + +1.7 193,591 + -1.0
Or see this region's nucleotide sequence