Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02206 and BACOVA_02207 overlap by 13 nucleotides BACOVA_02207 and BACOVA_02208 are separated by 7 nucleotides
BACOVA_02206: BACOVA_02206 - SWIM zinc finger domain protein, at 563,956 to 565,311
_02206
BACOVA_02207: BACOVA_02207 - hypothetical protein, at 565,299 to 568,286
_02207
BACOVA_02208: BACOVA_02208 - hypothetical protein, at 568,294 to 571,203
_02208
Position (kb) 565
566
567
568
569 Strain fitness (log2 ratio) -2
-1
0
1
2 at 564.351 kb on - strand, within BACOVA_02206 at 564.360 kb on - strand, within BACOVA_02206 at 564.378 kb on - strand, within BACOVA_02206 at 564.380 kb on + strand, within BACOVA_02206 at 564.413 kb on - strand, within BACOVA_02206 at 564.415 kb on - strand, within BACOVA_02206 at 564.446 kb on + strand, within BACOVA_02206 at 564.485 kb on + strand, within BACOVA_02206 at 564.494 kb on - strand, within BACOVA_02206 at 564.542 kb on + strand, within BACOVA_02206 at 564.589 kb on + strand, within BACOVA_02206 at 564.716 kb on + strand, within BACOVA_02206 at 564.716 kb on + strand, within BACOVA_02206 at 564.732 kb on + strand, within BACOVA_02206 at 564.741 kb on + strand, within BACOVA_02206 at 564.741 kb on + strand, within BACOVA_02206 at 564.742 kb on - strand, within BACOVA_02206 at 564.742 kb on - strand, within BACOVA_02206 at 564.745 kb on - strand, within BACOVA_02206 at 564.758 kb on - strand, within BACOVA_02206 at 564.758 kb on - strand, within BACOVA_02206 at 564.758 kb on - strand, within BACOVA_02206 at 564.758 kb on - strand, within BACOVA_02206 at 564.870 kb on - strand, within BACOVA_02206 at 564.883 kb on - strand, within BACOVA_02206 at 564.886 kb on + strand, within BACOVA_02206 at 564.887 kb on - strand, within BACOVA_02206 at 564.929 kb on + strand, within BACOVA_02206 at 564.939 kb on + strand, within BACOVA_02206 at 564.939 kb on + strand, within BACOVA_02206 at 564.951 kb on + strand, within BACOVA_02206 at 564.952 kb on - strand, within BACOVA_02206 at 564.956 kb on + strand, within BACOVA_02206 at 564.957 kb on - strand, within BACOVA_02206 at 565.057 kb on - strand, within BACOVA_02206 at 565.083 kb on - strand, within BACOVA_02206 at 565.116 kb on - strand, within BACOVA_02206 at 565.183 kb on - strand at 565.243 kb on - strand at 565.341 kb on + strand at 565.342 kb on - strand at 565.376 kb on - strand at 565.386 kb on - strand at 565.460 kb on - strand at 565.540 kb on + strand at 565.541 kb on - strand at 565.572 kb on + strand at 565.572 kb on + strand at 565.750 kb on + strand, within BACOVA_02207 at 565.750 kb on + strand, within BACOVA_02207 at 565.751 kb on - strand, within BACOVA_02207 at 565.751 kb on - strand, within BACOVA_02207 at 565.778 kb on + strand, within BACOVA_02207 at 565.799 kb on + strand, within BACOVA_02207 at 565.816 kb on + strand, within BACOVA_02207 at 565.832 kb on + strand, within BACOVA_02207 at 565.836 kb on - strand, within BACOVA_02207 at 565.916 kb on + strand, within BACOVA_02207 at 566.005 kb on + strand, within BACOVA_02207 at 566.006 kb on - strand, within BACOVA_02207 at 566.113 kb on + strand, within BACOVA_02207 at 566.114 kb on - strand, within BACOVA_02207 at 566.166 kb on - strand, within BACOVA_02207 at 566.167 kb on + strand, within BACOVA_02207 at 566.167 kb on + strand, within BACOVA_02207 at 566.168 kb on - strand, within BACOVA_02207 at 566.168 kb on - strand, within BACOVA_02207 at 566.276 kb on - strand, within BACOVA_02207 at 566.283 kb on + strand, within BACOVA_02207 at 566.283 kb on + strand, within BACOVA_02207 at 566.284 kb on - strand, within BACOVA_02207 at 566.284 kb on - strand, within BACOVA_02207 at 566.289 kb on - strand, within BACOVA_02207 at 566.289 kb on - strand, within BACOVA_02207 at 566.339 kb on + strand, within BACOVA_02207 at 566.340 kb on - strand, within BACOVA_02207 at 566.340 kb on - strand, within BACOVA_02207 at 566.357 kb on - strand, within BACOVA_02207 at 566.357 kb on - strand, within BACOVA_02207 at 566.412 kb on + strand, within BACOVA_02207 at 566.412 kb on + strand, within BACOVA_02207 at 566.449 kb on + strand, within BACOVA_02207 at 566.450 kb on - strand, within BACOVA_02207 at 566.450 kb on - strand, within BACOVA_02207 at 566.458 kb on - strand, within BACOVA_02207 at 566.470 kb on + strand, within BACOVA_02207 at 566.518 kb on + strand, within BACOVA_02207 at 566.519 kb on - strand, within BACOVA_02207 at 566.531 kb on + strand, within BACOVA_02207 at 566.532 kb on - strand, within BACOVA_02207 at 566.570 kb on + strand, within BACOVA_02207 at 566.570 kb on + strand, within BACOVA_02207 at 566.570 kb on + strand, within BACOVA_02207 at 566.571 kb on - strand, within BACOVA_02207 at 566.571 kb on - strand, within BACOVA_02207 at 566.597 kb on + strand, within BACOVA_02207 at 566.624 kb on + strand, within BACOVA_02207 at 566.625 kb on - strand, within BACOVA_02207 at 566.627 kb on + strand, within BACOVA_02207 at 566.642 kb on + strand, within BACOVA_02207 at 566.724 kb on - strand, within BACOVA_02207 at 566.788 kb on + strand, within BACOVA_02207 at 566.895 kb on - strand, within BACOVA_02207 at 566.895 kb on - strand, within BACOVA_02207 at 566.907 kb on + strand, within BACOVA_02207 at 566.907 kb on + strand, within BACOVA_02207 at 566.908 kb on - strand, within BACOVA_02207 at 566.940 kb on + strand, within BACOVA_02207 at 566.950 kb on + strand, within BACOVA_02207 at 567.028 kb on + strand, within BACOVA_02207 at 567.032 kb on + strand, within BACOVA_02207 at 567.033 kb on - strand, within BACOVA_02207 at 567.049 kb on - strand, within BACOVA_02207 at 567.115 kb on + strand, within BACOVA_02207 at 567.115 kb on + strand, within BACOVA_02207 at 567.211 kb on + strand, within BACOVA_02207 at 567.212 kb on - strand, within BACOVA_02207 at 567.212 kb on - strand, within BACOVA_02207 at 567.325 kb on - strand, within BACOVA_02207 at 567.353 kb on - strand, within BACOVA_02207 at 567.557 kb on + strand, within BACOVA_02207 at 567.571 kb on - strand, within BACOVA_02207 at 567.622 kb on - strand, within BACOVA_02207 at 567.622 kb on - strand, within BACOVA_02207 at 567.622 kb on - strand, within BACOVA_02207 at 567.665 kb on + strand, within BACOVA_02207 at 567.666 kb on - strand, within BACOVA_02207 at 567.669 kb on - strand, within BACOVA_02207 at 567.678 kb on + strand, within BACOVA_02207 at 567.679 kb on - strand, within BACOVA_02207 at 567.712 kb on + strand, within BACOVA_02207 at 567.723 kb on + strand, within BACOVA_02207 at 567.758 kb on + strand, within BACOVA_02207 at 567.768 kb on + strand, within BACOVA_02207 at 567.869 kb on - strand, within BACOVA_02207 at 567.869 kb on - strand, within BACOVA_02207 at 567.874 kb on + strand, within BACOVA_02207 at 567.918 kb on + strand, within BACOVA_02207 at 567.918 kb on + strand, within BACOVA_02207 at 567.919 kb on - strand, within BACOVA_02207 at 567.938 kb on - strand, within BACOVA_02207 at 567.962 kb on - strand, within BACOVA_02207 at 567.962 kb on - strand, within BACOVA_02207 at 568.022 kb on - strand at 568.042 kb on + strand at 568.043 kb on - strand at 568.105 kb on + strand at 568.105 kb on + strand at 568.106 kb on - strand at 568.106 kb on - strand at 568.106 kb on - strand at 568.109 kb on + strand at 568.174 kb on + strand at 568.282 kb on + strand at 568.285 kb on - strand at 568.285 kb on - strand at 568.288 kb on + strand at 568.288 kb on + strand at 568.299 kb on + strand at 568.328 kb on + strand at 568.352 kb on - strand at 568.429 kb on + strand at 568.430 kb on - strand at 568.432 kb on + strand at 568.432 kb on + strand at 568.433 kb on - strand at 568.433 kb on - strand at 568.433 kb on - strand at 568.453 kb on - strand at 568.465 kb on + strand at 568.466 kb on - strand at 568.470 kb on + strand at 568.471 kb on - strand at 568.498 kb on - strand at 568.706 kb on + strand, within BACOVA_02208 at 568.706 kb on + strand, within BACOVA_02208 at 568.706 kb on + strand, within BACOVA_02208 at 568.710 kb on + strand, within BACOVA_02208 at 568.711 kb on - strand, within BACOVA_02208 at 568.711 kb on - strand, within BACOVA_02208 at 568.757 kb on - strand, within BACOVA_02208 at 568.757 kb on - strand, within BACOVA_02208 at 568.759 kb on - strand, within BACOVA_02208 at 568.764 kb on + strand, within BACOVA_02208 at 568.765 kb on - strand, within BACOVA_02208 at 568.768 kb on - strand, within BACOVA_02208 at 568.809 kb on + strand, within BACOVA_02208 at 568.809 kb on + strand, within BACOVA_02208 at 568.809 kb on + strand, within BACOVA_02208 at 568.810 kb on - strand, within BACOVA_02208 at 568.817 kb on - strand, within BACOVA_02208 at 568.913 kb on + strand, within BACOVA_02208 at 568.920 kb on + strand, within BACOVA_02208 at 568.920 kb on + strand, within BACOVA_02208 at 568.931 kb on + strand, within BACOVA_02208 at 568.932 kb on - strand, within BACOVA_02208 at 569.010 kb on + strand, within BACOVA_02208 at 569.010 kb on + strand, within BACOVA_02208 at 569.010 kb on + strand, within BACOVA_02208 at 569.021 kb on + strand, within BACOVA_02208 at 569.039 kb on + strand, within BACOVA_02208 at 569.051 kb on + strand, within BACOVA_02208 at 569.051 kb on + strand, within BACOVA_02208 at 569.052 kb on - strand, within BACOVA_02208 at 569.117 kb on + strand, within BACOVA_02208 at 569.216 kb on + strand, within BACOVA_02208 at 569.216 kb on + strand, within BACOVA_02208 at 569.217 kb on - strand, within BACOVA_02208 at 569.220 kb on + strand, within BACOVA_02208 at 569.220 kb on + strand, within BACOVA_02208 at 569.221 kb on - strand, within BACOVA_02208 at 569.221 kb on - strand, within BACOVA_02208
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 564,351 - BACOVA_02206 0.29 -0.9 564,360 - BACOVA_02206 0.30 +0.3 564,378 - BACOVA_02206 0.31 +0.1 564,380 + BACOVA_02206 0.31 -1.8 564,413 - BACOVA_02206 0.34 +0.7 564,415 - BACOVA_02206 0.34 +0.7 564,446 + BACOVA_02206 0.36 -1.0 564,485 + BACOVA_02206 0.39 +0.0 564,494 - BACOVA_02206 0.40 -1.1 564,542 + BACOVA_02206 0.43 -1.9 564,589 + BACOVA_02206 0.47 +0.3 564,716 + BACOVA_02206 0.56 -0.3 564,716 + BACOVA_02206 0.56 +0.0 564,732 + BACOVA_02206 0.57 -1.4 564,741 + BACOVA_02206 0.58 +0.7 564,741 + BACOVA_02206 0.58 +0.0 564,742 - BACOVA_02206 0.58 -0.3 564,742 - BACOVA_02206 0.58 -1.3 564,745 - BACOVA_02206 0.58 -1.1 564,758 - BACOVA_02206 0.59 -0.4 564,758 - BACOVA_02206 0.59 -1.5 564,758 - BACOVA_02206 0.59 +0.7 564,758 - BACOVA_02206 0.59 -2.3 564,870 - BACOVA_02206 0.67 +0.9 564,883 - BACOVA_02206 0.68 -0.7 564,886 + BACOVA_02206 0.69 -1.3 564,887 - BACOVA_02206 0.69 -0.6 564,929 + BACOVA_02206 0.72 -1.4 564,939 + BACOVA_02206 0.72 -0.5 564,939 + BACOVA_02206 0.72 -0.6 564,951 + BACOVA_02206 0.73 +1.4 564,952 - BACOVA_02206 0.73 -2.4 564,956 + BACOVA_02206 0.74 -0.6 564,957 - BACOVA_02206 0.74 -0.3 565,057 - BACOVA_02206 0.81 +0.9 565,083 - BACOVA_02206 0.83 +1.6 565,116 - BACOVA_02206 0.86 +0.4 565,183 - -0.9 565,243 - +1.4 565,341 + +0.2 565,342 - +0.7 565,376 - -1.1 565,386 - -0.6 565,460 - -0.3 565,540 + +0.3 565,541 - -0.8 565,572 + +1.0 565,572 + +0.2 565,750 + BACOVA_02207 0.15 +0.8 565,750 + BACOVA_02207 0.15 +2.4 565,751 - BACOVA_02207 0.15 -1.7 565,751 - BACOVA_02207 0.15 -0.4 565,778 + BACOVA_02207 0.16 -1.1 565,799 + BACOVA_02207 0.17 +0.7 565,816 + BACOVA_02207 0.17 +0.9 565,832 + BACOVA_02207 0.18 +1.1 565,836 - BACOVA_02207 0.18 -0.4 565,916 + BACOVA_02207 0.21 -0.2 566,005 + BACOVA_02207 0.24 +0.4 566,006 - BACOVA_02207 0.24 +0.4 566,113 + BACOVA_02207 0.27 -0.4 566,114 - BACOVA_02207 0.27 +0.4 566,166 - BACOVA_02207 0.29 -0.7 566,167 + BACOVA_02207 0.29 +1.4 566,167 + BACOVA_02207 0.29 -0.0 566,168 - BACOVA_02207 0.29 -0.3 566,168 - BACOVA_02207 0.29 +1.0 566,276 - BACOVA_02207 0.33 +0.2 566,283 + BACOVA_02207 0.33 +1.0 566,283 + BACOVA_02207 0.33 -0.2 566,284 - BACOVA_02207 0.33 +0.0 566,284 - BACOVA_02207 0.33 +0.5 566,289 - BACOVA_02207 0.33 -1.8 566,289 - BACOVA_02207 0.33 -1.0 566,339 + BACOVA_02207 0.35 +0.9 566,340 - BACOVA_02207 0.35 +0.4 566,340 - BACOVA_02207 0.35 -1.4 566,357 - BACOVA_02207 0.35 +0.7 566,357 - BACOVA_02207 0.35 +0.3 566,412 + BACOVA_02207 0.37 +1.6 566,412 + BACOVA_02207 0.37 -1.4 566,449 + BACOVA_02207 0.38 -2.5 566,450 - BACOVA_02207 0.39 +1.3 566,450 - BACOVA_02207 0.39 +0.9 566,458 - BACOVA_02207 0.39 -0.6 566,470 + BACOVA_02207 0.39 -1.8 566,518 + BACOVA_02207 0.41 -0.9 566,519 - BACOVA_02207 0.41 +0.1 566,531 + BACOVA_02207 0.41 +1.0 566,532 - BACOVA_02207 0.41 -0.4 566,570 + BACOVA_02207 0.43 -0.4 566,570 + BACOVA_02207 0.43 -0.4 566,570 + BACOVA_02207 0.43 +0.3 566,571 - BACOVA_02207 0.43 +1.3 566,571 - BACOVA_02207 0.43 +0.9 566,597 + BACOVA_02207 0.43 +1.4 566,624 + BACOVA_02207 0.44 -0.9 566,625 - BACOVA_02207 0.44 -2.0 566,627 + BACOVA_02207 0.44 -0.9 566,642 + BACOVA_02207 0.45 +0.5 566,724 - BACOVA_02207 0.48 +0.2 566,788 + BACOVA_02207 0.50 -0.3 566,895 - BACOVA_02207 0.53 -1.4 566,895 - BACOVA_02207 0.53 +0.9 566,907 + BACOVA_02207 0.54 -2.3 566,907 + BACOVA_02207 0.54 -0.4 566,908 - BACOVA_02207 0.54 +0.4 566,940 + BACOVA_02207 0.55 -0.9 566,950 + BACOVA_02207 0.55 +0.4 567,028 + BACOVA_02207 0.58 +0.4 567,032 + BACOVA_02207 0.58 +0.4 567,033 - BACOVA_02207 0.58 -1.6 567,049 - BACOVA_02207 0.59 +0.2 567,115 + BACOVA_02207 0.61 -0.1 567,115 + BACOVA_02207 0.61 -0.1 567,211 + BACOVA_02207 0.64 -0.8 567,212 - BACOVA_02207 0.64 +0.9 567,212 - BACOVA_02207 0.64 -0.1 567,325 - BACOVA_02207 0.68 +1.0 567,353 - BACOVA_02207 0.69 -0.2 567,557 + BACOVA_02207 0.76 -1.1 567,571 - BACOVA_02207 0.76 -1.6 567,622 - BACOVA_02207 0.78 +0.0 567,622 - BACOVA_02207 0.78 -0.9 567,622 - BACOVA_02207 0.78 -0.4 567,665 + BACOVA_02207 0.79 +0.5 567,666 - BACOVA_02207 0.79 +0.6 567,669 - BACOVA_02207 0.79 +0.7 567,678 + BACOVA_02207 0.80 -0.4 567,679 - BACOVA_02207 0.80 -0.4 567,712 + BACOVA_02207 0.81 -0.2 567,723 + BACOVA_02207 0.81 +0.4 567,758 + BACOVA_02207 0.82 -0.1 567,768 + BACOVA_02207 0.83 -0.0 567,869 - BACOVA_02207 0.86 +1.0 567,869 - BACOVA_02207 0.86 -0.3 567,874 + BACOVA_02207 0.86 +0.8 567,918 + BACOVA_02207 0.88 -0.1 567,918 + BACOVA_02207 0.88 +0.7 567,919 - BACOVA_02207 0.88 +0.7 567,938 - BACOVA_02207 0.88 -1.1 567,962 - BACOVA_02207 0.89 +1.0 567,962 - BACOVA_02207 0.89 +0.2 568,022 - -1.6 568,042 + -2.1 568,043 - +0.2 568,105 + +0.0 568,105 + -0.6 568,106 - +0.9 568,106 - -1.0 568,106 - +1.8 568,109 + +0.1 568,174 + -0.5 568,282 + -0.3 568,285 - +2.4 568,285 - +1.1 568,288 + +0.1 568,288 + +0.4 568,299 + +0.7 568,328 + -0.5 568,352 - -0.4 568,429 + -0.4 568,430 - +1.3 568,432 + +0.4 568,432 + -0.1 568,433 - -0.2 568,433 - +0.6 568,433 - -0.0 568,453 - +0.5 568,465 + +0.4 568,466 - -0.5 568,470 + -0.7 568,471 - -0.3 568,498 - -0.2 568,706 + BACOVA_02208 0.14 -0.4 568,706 + BACOVA_02208 0.14 -0.5 568,706 + BACOVA_02208 0.14 +0.6 568,710 + BACOVA_02208 0.14 +0.8 568,711 - BACOVA_02208 0.14 +1.1 568,711 - BACOVA_02208 0.14 +0.2 568,757 - BACOVA_02208 0.16 +0.3 568,757 - BACOVA_02208 0.16 +0.6 568,759 - BACOVA_02208 0.16 +0.5 568,764 + BACOVA_02208 0.16 +0.2 568,765 - BACOVA_02208 0.16 -0.1 568,768 - BACOVA_02208 0.16 -1.7 568,809 + BACOVA_02208 0.18 -0.3 568,809 + BACOVA_02208 0.18 +0.3 568,809 + BACOVA_02208 0.18 -0.7 568,810 - BACOVA_02208 0.18 -0.2 568,817 - BACOVA_02208 0.18 -0.5 568,913 + BACOVA_02208 0.21 -0.1 568,920 + BACOVA_02208 0.22 +0.4 568,920 + BACOVA_02208 0.22 -0.0 568,931 + BACOVA_02208 0.22 +0.7 568,932 - BACOVA_02208 0.22 +0.3 569,010 + BACOVA_02208 0.25 -0.5 569,010 + BACOVA_02208 0.25 -1.6 569,010 + BACOVA_02208 0.25 +1.0 569,021 + BACOVA_02208 0.25 -0.6 569,039 + BACOVA_02208 0.26 -1.3 569,051 + BACOVA_02208 0.26 -0.3 569,051 + BACOVA_02208 0.26 -1.6 569,052 - BACOVA_02208 0.26 +0.0 569,117 + BACOVA_02208 0.28 -0.4 569,216 + BACOVA_02208 0.32 -0.2 569,216 + BACOVA_02208 0.32 -1.1 569,217 - BACOVA_02208 0.32 -0.4 569,220 + BACOVA_02208 0.32 +1.7 569,220 + BACOVA_02208 0.32 +0.3 569,221 - BACOVA_02208 0.32 +0.1 569,221 - BACOVA_02208 0.32 +2.2
Or see this region's nucleotide sequence