Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02029 and BACOVA_02030 are separated by 346 nucleotides BACOVA_02030 and BACOVA_02031 are separated by 30 nucleotides BACOVA_02031 and BACOVA_02032 are separated by 7 nucleotides
BACOVA_02029: BACOVA_02029 - hypothetical protein, at 333,174 to 333,371
_02029
BACOVA_02030: BACOVA_02030 - comF family protein, at 333,718 to 334,422
_02030
BACOVA_02031: BACOVA_02031 - inositol monophosphatase family protein, at 334,453 to 335,256
_02031
BACOVA_02032: BACOVA_02032 - hypothetical protein, at 335,264 to 335,404
_02032
Position (kb) 333
334
335 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 332.729 kb on - strand at 332.754 kb on - strand at 332.766 kb on - strand at 332.783 kb on - strand at 332.786 kb on - strand at 332.824 kb on - strand at 332.824 kb on - strand at 332.903 kb on - strand at 332.954 kb on - strand at 332.954 kb on - strand at 332.954 kb on - strand at 332.957 kb on + strand at 332.963 kb on + strand at 332.963 kb on + strand at 332.964 kb on - strand at 332.964 kb on - strand at 332.986 kb on + strand at 333.025 kb on + strand at 333.036 kb on + strand at 333.042 kb on + strand at 333.109 kb on - strand at 333.152 kb on + strand at 333.190 kb on - strand at 333.198 kb on - strand, within BACOVA_02029 at 333.222 kb on + strand, within BACOVA_02029 at 333.223 kb on - strand, within BACOVA_02029 at 333.223 kb on - strand, within BACOVA_02029 at 333.224 kb on + strand, within BACOVA_02029 at 333.226 kb on + strand, within BACOVA_02029 at 333.246 kb on + strand, within BACOVA_02029 at 333.251 kb on + strand, within BACOVA_02029 at 333.252 kb on - strand, within BACOVA_02029 at 333.284 kb on - strand, within BACOVA_02029 at 333.400 kb on + strand at 333.400 kb on + strand at 333.400 kb on + strand at 333.400 kb on + strand at 333.400 kb on + strand at 333.401 kb on - strand at 333.409 kb on + strand at 333.409 kb on + strand at 333.410 kb on - strand at 333.410 kb on - strand at 333.411 kb on + strand at 333.413 kb on + strand at 333.414 kb on - strand at 333.414 kb on - strand at 333.443 kb on - strand at 333.469 kb on + strand at 333.470 kb on - strand at 333.517 kb on - strand at 333.572 kb on - strand at 333.626 kb on + strand at 333.627 kb on - strand at 333.627 kb on - strand at 333.636 kb on + strand at 333.673 kb on - strand at 333.698 kb on + strand at 333.699 kb on - strand at 333.701 kb on - strand at 333.739 kb on + strand at 333.741 kb on + strand at 333.741 kb on + strand at 333.742 kb on - strand at 333.745 kb on - strand at 333.745 kb on - strand at 333.795 kb on + strand, within BACOVA_02030 at 333.824 kb on - strand, within BACOVA_02030 at 333.824 kb on - strand, within BACOVA_02030 at 333.829 kb on + strand, within BACOVA_02030 at 333.830 kb on - strand, within BACOVA_02030 at 333.830 kb on - strand, within BACOVA_02030 at 333.830 kb on - strand, within BACOVA_02030 at 333.830 kb on - strand, within BACOVA_02030 at 333.874 kb on - strand, within BACOVA_02030 at 333.874 kb on - strand, within BACOVA_02030 at 333.886 kb on - strand, within BACOVA_02030 at 333.940 kb on + strand, within BACOVA_02030 at 333.954 kb on + strand, within BACOVA_02030 at 333.973 kb on + strand, within BACOVA_02030 at 334.011 kb on + strand, within BACOVA_02030 at 334.012 kb on - strand, within BACOVA_02030 at 334.012 kb on - strand, within BACOVA_02030 at 334.107 kb on + strand, within BACOVA_02030 at 334.110 kb on - strand, within BACOVA_02030 at 334.129 kb on + strand, within BACOVA_02030 at 334.129 kb on + strand, within BACOVA_02030 at 334.130 kb on - strand, within BACOVA_02030 at 334.130 kb on - strand, within BACOVA_02030 at 334.148 kb on + strand, within BACOVA_02030 at 334.257 kb on + strand, within BACOVA_02030 at 334.275 kb on - strand, within BACOVA_02030 at 334.297 kb on - strand, within BACOVA_02030 at 334.297 kb on - strand, within BACOVA_02030 at 334.299 kb on + strand, within BACOVA_02030 at 334.300 kb on - strand, within BACOVA_02030 at 334.300 kb on - strand, within BACOVA_02030 at 334.300 kb on - strand, within BACOVA_02030 at 334.300 kb on - strand, within BACOVA_02030 at 334.300 kb on - strand, within BACOVA_02030 at 334.308 kb on + strand, within BACOVA_02030 at 334.314 kb on + strand, within BACOVA_02030 at 334.315 kb on - strand, within BACOVA_02030 at 334.315 kb on - strand, within BACOVA_02030 at 334.334 kb on - strand, within BACOVA_02030 at 334.378 kb on + strand at 334.379 kb on - strand at 334.379 kb on - strand at 334.389 kb on + strand at 334.389 kb on + strand at 334.390 kb on - strand at 334.390 kb on - strand at 334.422 kb on + strand at 334.425 kb on + strand at 334.426 kb on - strand at 334.428 kb on + strand at 334.429 kb on - strand at 334.443 kb on - strand at 334.448 kb on - strand at 334.454 kb on + strand at 334.454 kb on + strand at 334.458 kb on + strand at 334.527 kb on + strand at 334.528 kb on - strand at 334.528 kb on - strand at 334.528 kb on - strand at 334.670 kb on + strand, within BACOVA_02031 at 334.671 kb on - strand, within BACOVA_02031 at 334.708 kb on - strand, within BACOVA_02031 at 334.725 kb on - strand, within BACOVA_02031 at 334.760 kb on + strand, within BACOVA_02031 at 334.775 kb on + strand, within BACOVA_02031 at 334.882 kb on + strand, within BACOVA_02031 at 334.901 kb on + strand, within BACOVA_02031 at 334.901 kb on + strand, within BACOVA_02031 at 334.936 kb on + strand, within BACOVA_02031 at 334.937 kb on - strand, within BACOVA_02031 at 334.975 kb on - strand, within BACOVA_02031 at 334.975 kb on - strand, within BACOVA_02031 at 334.976 kb on + strand, within BACOVA_02031 at 334.976 kb on + strand, within BACOVA_02031 at 334.977 kb on - strand, within BACOVA_02031 at 335.015 kb on + strand, within BACOVA_02031 at 335.030 kb on + strand, within BACOVA_02031 at 335.083 kb on - strand, within BACOVA_02031 at 335.083 kb on - strand, within BACOVA_02031 at 335.124 kb on - strand, within BACOVA_02031 at 335.124 kb on - strand, within BACOVA_02031 at 335.132 kb on + strand, within BACOVA_02031 at 335.132 kb on + strand, within BACOVA_02031 at 335.133 kb on - strand, within BACOVA_02031 at 335.133 kb on - strand, within BACOVA_02031 at 335.224 kb on + strand at 335.235 kb on + strand at 335.235 kb on + strand at 335.236 kb on - strand at 335.259 kb on - strand at 335.356 kb on + strand, within BACOVA_02032 at 335.380 kb on + strand, within BACOVA_02032 at 335.380 kb on + strand, within BACOVA_02032 at 335.381 kb on - strand, within BACOVA_02032 at 335.381 kb on - strand, within BACOVA_02032 at 335.384 kb on + strand, within BACOVA_02032 at 335.385 kb on + strand, within BACOVA_02032 at 335.396 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 332,729 - -0.9 332,754 - -0.4 332,766 - -1.8 332,783 - -0.8 332,786 - -1.5 332,824 - -0.6 332,824 - -2.6 332,903 - -0.2 332,954 - -1.1 332,954 - +1.2 332,954 - -1.2 332,957 + +2.0 332,963 + +0.3 332,963 + +2.0 332,964 - -0.1 332,964 - -0.3 332,986 + -0.6 333,025 + +0.9 333,036 + -0.8 333,042 + -1.0 333,109 - -0.6 333,152 + -2.2 333,190 - -1.1 333,198 - BACOVA_02029 0.12 -1.1 333,222 + BACOVA_02029 0.24 -0.3 333,223 - BACOVA_02029 0.25 -4.1 333,223 - BACOVA_02029 0.25 -0.2 333,224 + BACOVA_02029 0.25 -0.3 333,226 + BACOVA_02029 0.26 +0.6 333,246 + BACOVA_02029 0.36 -0.9 333,251 + BACOVA_02029 0.39 -0.5 333,252 - BACOVA_02029 0.39 -1.5 333,284 - BACOVA_02029 0.56 -0.9 333,400 + -3.3 333,400 + -1.1 333,400 + +0.3 333,400 + -1.9 333,400 + -0.5 333,401 - -0.2 333,409 + -0.6 333,409 + -1.8 333,410 - -1.0 333,410 - -3.0 333,411 + +0.8 333,413 + -1.2 333,414 - -0.4 333,414 - -3.0 333,443 - -1.8 333,469 + +1.2 333,470 - +0.2 333,517 - +1.6 333,572 - +2.0 333,626 + +0.4 333,627 - -1.8 333,627 - -1.6 333,636 + +0.2 333,673 - -0.0 333,698 + -1.9 333,699 - -1.7 333,701 - -0.3 333,739 + +1.6 333,741 + -0.3 333,741 + -0.1 333,742 - -0.7 333,745 - -0.9 333,745 - -1.2 333,795 + BACOVA_02030 0.11 +0.1 333,824 - BACOVA_02030 0.15 -1.0 333,824 - BACOVA_02030 0.15 +0.2 333,829 + BACOVA_02030 0.16 +0.3 333,830 - BACOVA_02030 0.16 +0.2 333,830 - BACOVA_02030 0.16 +0.2 333,830 - BACOVA_02030 0.16 -0.5 333,830 - BACOVA_02030 0.16 -0.8 333,874 - BACOVA_02030 0.22 -1.0 333,874 - BACOVA_02030 0.22 -1.0 333,886 - BACOVA_02030 0.24 -0.4 333,940 + BACOVA_02030 0.31 -0.5 333,954 + BACOVA_02030 0.33 +1.8 333,973 + BACOVA_02030 0.36 -0.7 334,011 + BACOVA_02030 0.42 -2.6 334,012 - BACOVA_02030 0.42 -0.8 334,012 - BACOVA_02030 0.42 -0.5 334,107 + BACOVA_02030 0.55 -1.7 334,110 - BACOVA_02030 0.56 -0.4 334,129 + BACOVA_02030 0.58 -0.5 334,129 + BACOVA_02030 0.58 -1.3 334,130 - BACOVA_02030 0.58 -0.2 334,130 - BACOVA_02030 0.58 -0.1 334,148 + BACOVA_02030 0.61 -0.9 334,257 + BACOVA_02030 0.76 -0.1 334,275 - BACOVA_02030 0.79 -0.7 334,297 - BACOVA_02030 0.82 +0.3 334,297 - BACOVA_02030 0.82 +0.1 334,299 + BACOVA_02030 0.82 -0.6 334,300 - BACOVA_02030 0.83 -0.8 334,300 - BACOVA_02030 0.83 -1.2 334,300 - BACOVA_02030 0.83 +0.4 334,300 - BACOVA_02030 0.83 -0.4 334,300 - BACOVA_02030 0.83 -0.1 334,308 + BACOVA_02030 0.84 +0.4 334,314 + BACOVA_02030 0.85 -1.4 334,315 - BACOVA_02030 0.85 +0.3 334,315 - BACOVA_02030 0.85 -1.2 334,334 - BACOVA_02030 0.87 -0.5 334,378 + +0.4 334,379 - +0.0 334,379 - -0.9 334,389 + -2.1 334,389 + +0.4 334,390 - -0.8 334,390 - -0.1 334,422 + +0.7 334,425 + +1.0 334,426 - -2.4 334,428 + +0.4 334,429 - -0.2 334,443 - +1.2 334,448 - +0.4 334,454 + -3.1 334,454 + -1.2 334,458 + -2.2 334,527 + -1.1 334,528 - -1.3 334,528 - -2.3 334,528 - -1.4 334,670 + BACOVA_02031 0.27 -1.0 334,671 - BACOVA_02031 0.27 -0.1 334,708 - BACOVA_02031 0.32 +0.4 334,725 - BACOVA_02031 0.34 -0.7 334,760 + BACOVA_02031 0.38 -0.2 334,775 + BACOVA_02031 0.40 +0.4 334,882 + BACOVA_02031 0.53 -1.9 334,901 + BACOVA_02031 0.56 -1.3 334,901 + BACOVA_02031 0.56 -1.7 334,936 + BACOVA_02031 0.60 -2.2 334,937 - BACOVA_02031 0.60 -0.4 334,975 - BACOVA_02031 0.65 -1.2 334,975 - BACOVA_02031 0.65 +0.5 334,976 + BACOVA_02031 0.65 -1.8 334,976 + BACOVA_02031 0.65 +0.7 334,977 - BACOVA_02031 0.65 -1.2 335,015 + BACOVA_02031 0.70 -0.5 335,030 + BACOVA_02031 0.72 -0.4 335,083 - BACOVA_02031 0.78 -0.0 335,083 - BACOVA_02031 0.78 -1.3 335,124 - BACOVA_02031 0.83 -1.4 335,124 - BACOVA_02031 0.83 -1.6 335,132 + BACOVA_02031 0.84 +1.0 335,132 + BACOVA_02031 0.84 +0.3 335,133 - BACOVA_02031 0.85 -0.5 335,133 - BACOVA_02031 0.85 -0.3 335,224 + -1.4 335,235 + -1.7 335,235 + -1.7 335,236 - -1.8 335,259 - +0.4 335,356 + BACOVA_02032 0.65 -0.4 335,380 + BACOVA_02032 0.82 +0.6 335,380 + BACOVA_02032 0.82 -1.0 335,381 - BACOVA_02032 0.83 +1.4 335,381 - BACOVA_02032 0.83 +0.6 335,384 + BACOVA_02032 0.85 +0.0 335,385 + BACOVA_02032 0.86 -1.7 335,396 + -0.8
Or see this region's nucleotide sequence