Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_01537 and BACOVA_01538 are separated by 302 nucleotides BACOVA_01538 and BACOVA_01539 are separated by 144 nucleotides BACOVA_01539 and BACOVA_01540 are separated by 60 nucleotides
BACOVA_01537: BACOVA_01537 - hypothetical protein, at 34,951 to 35,820
_01537
BACOVA_01538: BACOVA_01538 - MIP family channel protein, at 36,123 to 36,782
_01538
BACOVA_01539: BACOVA_01539 - hypothetical protein, at 36,927 to 37,430
_01539
BACOVA_01540: BACOVA_01540 - OmpA family protein, at 37,491 to 38,660
_01540
Position (kb) 36
37 Strain fitness (log2 ratio) -2
-1
0
1
2 at 35.128 kb on + strand, within BACOVA_01537 at 35.128 kb on + strand, within BACOVA_01537 at 35.129 kb on - strand, within BACOVA_01537 at 35.134 kb on + strand, within BACOVA_01537 at 35.135 kb on - strand, within BACOVA_01537 at 35.135 kb on - strand, within BACOVA_01537 at 35.135 kb on - strand, within BACOVA_01537 at 35.167 kb on - strand, within BACOVA_01537 at 35.188 kb on - strand, within BACOVA_01537 at 35.241 kb on - strand, within BACOVA_01537 at 35.241 kb on - strand, within BACOVA_01537 at 35.314 kb on + strand, within BACOVA_01537 at 35.330 kb on + strand, within BACOVA_01537 at 35.331 kb on - strand, within BACOVA_01537 at 35.421 kb on - strand, within BACOVA_01537 at 35.438 kb on + strand, within BACOVA_01537 at 35.514 kb on - strand, within BACOVA_01537 at 35.519 kb on + strand, within BACOVA_01537 at 35.519 kb on + strand, within BACOVA_01537 at 35.520 kb on - strand, within BACOVA_01537 at 35.520 kb on - strand, within BACOVA_01537 at 35.548 kb on + strand, within BACOVA_01537 at 35.549 kb on - strand, within BACOVA_01537 at 35.549 kb on - strand, within BACOVA_01537 at 35.551 kb on + strand, within BACOVA_01537 at 35.552 kb on - strand, within BACOVA_01537 at 35.560 kb on + strand, within BACOVA_01537 at 35.560 kb on + strand, within BACOVA_01537 at 35.561 kb on - strand, within BACOVA_01537 at 35.592 kb on + strand, within BACOVA_01537 at 35.637 kb on + strand, within BACOVA_01537 at 35.638 kb on - strand, within BACOVA_01537 at 35.644 kb on + strand, within BACOVA_01537 at 35.646 kb on + strand, within BACOVA_01537 at 35.647 kb on - strand, within BACOVA_01537 at 35.647 kb on - strand, within BACOVA_01537 at 35.655 kb on + strand, within BACOVA_01537 at 35.656 kb on - strand, within BACOVA_01537 at 35.656 kb on - strand, within BACOVA_01537 at 35.703 kb on - strand, within BACOVA_01537 at 35.734 kb on - strand at 35.743 kb on - strand at 35.786 kb on + strand at 35.786 kb on + strand at 35.806 kb on + strand at 35.806 kb on + strand at 35.806 kb on + strand at 35.818 kb on + strand at 35.818 kb on + strand at 35.835 kb on - strand at 35.838 kb on - strand at 35.838 kb on - strand at 35.838 kb on - strand at 35.838 kb on - strand at 35.908 kb on + strand at 35.908 kb on + strand at 35.913 kb on + strand at 35.960 kb on - strand at 35.962 kb on + strand at 36.036 kb on - strand at 36.037 kb on + strand at 36.037 kb on + strand at 36.037 kb on + strand at 36.037 kb on + strand at 36.037 kb on + strand at 36.038 kb on - strand at 36.038 kb on - strand at 36.038 kb on - strand at 36.058 kb on + strand at 36.059 kb on - strand at 36.065 kb on - strand at 36.065 kb on - strand at 36.065 kb on - strand at 36.067 kb on + strand at 36.067 kb on + strand at 36.082 kb on + strand at 36.082 kb on + strand at 36.136 kb on - strand at 36.160 kb on - strand at 36.209 kb on + strand, within BACOVA_01538 at 36.209 kb on + strand, within BACOVA_01538 at 36.210 kb on - strand, within BACOVA_01538 at 36.282 kb on - strand, within BACOVA_01538 at 36.285 kb on + strand, within BACOVA_01538 at 36.285 kb on + strand, within BACOVA_01538 at 36.285 kb on + strand, within BACOVA_01538 at 36.286 kb on - strand, within BACOVA_01538 at 36.290 kb on + strand, within BACOVA_01538 at 36.290 kb on + strand, within BACOVA_01538 at 36.290 kb on + strand, within BACOVA_01538 at 36.291 kb on - strand, within BACOVA_01538 at 36.291 kb on - strand, within BACOVA_01538 at 36.291 kb on - strand, within BACOVA_01538 at 36.291 kb on - strand, within BACOVA_01538 at 36.291 kb on - strand, within BACOVA_01538 at 36.291 kb on - strand, within BACOVA_01538 at 36.344 kb on + strand, within BACOVA_01538 at 36.345 kb on - strand, within BACOVA_01538 at 36.345 kb on - strand, within BACOVA_01538 at 36.370 kb on - strand, within BACOVA_01538 at 36.370 kb on - strand, within BACOVA_01538 at 36.392 kb on + strand, within BACOVA_01538 at 36.392 kb on + strand, within BACOVA_01538 at 36.392 kb on + strand, within BACOVA_01538 at 36.393 kb on - strand, within BACOVA_01538 at 36.507 kb on + strand, within BACOVA_01538 at 36.528 kb on + strand, within BACOVA_01538 at 36.533 kb on + strand, within BACOVA_01538 at 36.535 kb on + strand, within BACOVA_01538 at 36.536 kb on - strand, within BACOVA_01538 at 36.536 kb on - strand, within BACOVA_01538 at 36.632 kb on - strand, within BACOVA_01538 at 36.798 kb on - strand at 36.805 kb on + strand at 36.835 kb on + strand at 36.843 kb on - strand at 36.850 kb on + strand at 36.850 kb on + strand at 36.928 kb on + strand at 36.928 kb on + strand at 36.988 kb on + strand, within BACOVA_01539 at 36.989 kb on - strand, within BACOVA_01539 at 36.989 kb on - strand, within BACOVA_01539 at 37.016 kb on + strand, within BACOVA_01539 at 37.017 kb on - strand, within BACOVA_01539 at 37.096 kb on + strand, within BACOVA_01539 at 37.186 kb on + strand, within BACOVA_01539 at 37.187 kb on - strand, within BACOVA_01539 at 37.273 kb on + strand, within BACOVA_01539 at 37.274 kb on - strand, within BACOVA_01539 at 37.274 kb on - strand, within BACOVA_01539 at 37.316 kb on + strand, within BACOVA_01539 at 37.316 kb on + strand, within BACOVA_01539 at 37.317 kb on - strand, within BACOVA_01539 at 37.319 kb on + strand, within BACOVA_01539 at 37.319 kb on + strand, within BACOVA_01539 at 37.319 kb on + strand, within BACOVA_01539 at 37.319 kb on + strand, within BACOVA_01539 at 37.319 kb on + strand, within BACOVA_01539 at 37.320 kb on - strand, within BACOVA_01539 at 37.321 kb on + strand, within BACOVA_01539 at 37.321 kb on + strand, within BACOVA_01539 at 37.321 kb on + strand, within BACOVA_01539 at 37.322 kb on - strand, within BACOVA_01539 at 37.322 kb on - strand, within BACOVA_01539 at 37.322 kb on - strand, within BACOVA_01539 at 37.323 kb on + strand, within BACOVA_01539 at 37.324 kb on - strand, within BACOVA_01539 at 37.326 kb on + strand, within BACOVA_01539 at 37.327 kb on - strand, within BACOVA_01539 at 37.430 kb on + strand at 37.490 kb on - strand at 37.504 kb on - strand at 37.586 kb on + strand at 37.603 kb on - strand at 37.609 kb on + strand, within BACOVA_01540 at 37.615 kb on + strand, within BACOVA_01540 at 37.616 kb on - strand, within BACOVA_01540 at 37.616 kb on - strand, within BACOVA_01540 at 37.616 kb on - strand, within BACOVA_01540 at 37.748 kb on + strand, within BACOVA_01540 at 37.749 kb on - strand, within BACOVA_01540 at 37.769 kb on + strand, within BACOVA_01540 at 37.770 kb on - strand, within BACOVA_01540
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 35,128 + BACOVA_01537 0.20 +1.0 35,128 + BACOVA_01537 0.20 +0.7 35,129 - BACOVA_01537 0.20 -0.2 35,134 + BACOVA_01537 0.21 -1.5 35,135 - BACOVA_01537 0.21 -0.5 35,135 - BACOVA_01537 0.21 -0.6 35,135 - BACOVA_01537 0.21 +0.1 35,167 - BACOVA_01537 0.25 +0.6 35,188 - BACOVA_01537 0.27 +2.2 35,241 - BACOVA_01537 0.33 -0.6 35,241 - BACOVA_01537 0.33 +0.1 35,314 + BACOVA_01537 0.42 +1.6 35,330 + BACOVA_01537 0.44 +0.6 35,331 - BACOVA_01537 0.44 +0.4 35,421 - BACOVA_01537 0.54 +0.5 35,438 + BACOVA_01537 0.56 -0.1 35,514 - BACOVA_01537 0.65 -0.8 35,519 + BACOVA_01537 0.65 -0.8 35,519 + BACOVA_01537 0.65 +0.2 35,520 - BACOVA_01537 0.65 -0.5 35,520 - BACOVA_01537 0.65 +0.5 35,548 + BACOVA_01537 0.69 +0.6 35,549 - BACOVA_01537 0.69 -1.4 35,549 - BACOVA_01537 0.69 -1.0 35,551 + BACOVA_01537 0.69 -1.0 35,552 - BACOVA_01537 0.69 -0.3 35,560 + BACOVA_01537 0.70 -1.7 35,560 + BACOVA_01537 0.70 +1.3 35,561 - BACOVA_01537 0.70 -0.6 35,592 + BACOVA_01537 0.74 +0.3 35,637 + BACOVA_01537 0.79 -0.0 35,638 - BACOVA_01537 0.79 -1.4 35,644 + BACOVA_01537 0.80 +0.3 35,646 + BACOVA_01537 0.80 +2.5 35,647 - BACOVA_01537 0.80 -0.6 35,647 - BACOVA_01537 0.80 -1.4 35,655 + BACOVA_01537 0.81 -0.6 35,656 - BACOVA_01537 0.81 -0.5 35,656 - BACOVA_01537 0.81 +1.0 35,703 - BACOVA_01537 0.86 -0.6 35,734 - -0.0 35,743 - +0.3 35,786 + +2.2 35,786 + -0.1 35,806 + +0.9 35,806 + +0.4 35,806 + +1.6 35,818 + -0.9 35,818 + -1.0 35,835 - -0.5 35,838 - -0.2 35,838 - +1.2 35,838 - -0.4 35,838 - -0.7 35,908 + -0.2 35,908 + -0.0 35,913 + -0.2 35,960 - +0.6 35,962 + -0.9 36,036 - +2.6 36,037 + -0.2 36,037 + -1.8 36,037 + +1.0 36,037 + -0.6 36,037 + +0.0 36,038 - +2.3 36,038 - +1.3 36,038 - +0.2 36,058 + +0.6 36,059 - +0.8 36,065 - -0.2 36,065 - -0.1 36,065 - +0.4 36,067 + -1.2 36,067 + -0.4 36,082 + -0.9 36,082 + +0.7 36,136 - -0.6 36,160 - +1.7 36,209 + BACOVA_01538 0.13 -0.6 36,209 + BACOVA_01538 0.13 +0.3 36,210 - BACOVA_01538 0.13 +1.3 36,282 - BACOVA_01538 0.24 +0.4 36,285 + BACOVA_01538 0.25 -1.1 36,285 + BACOVA_01538 0.25 -0.6 36,285 + BACOVA_01538 0.25 -0.2 36,286 - BACOVA_01538 0.25 +0.8 36,290 + BACOVA_01538 0.25 -0.9 36,290 + BACOVA_01538 0.25 -1.0 36,290 + BACOVA_01538 0.25 +0.8 36,291 - BACOVA_01538 0.25 +0.8 36,291 - BACOVA_01538 0.25 +1.0 36,291 - BACOVA_01538 0.25 +0.0 36,291 - BACOVA_01538 0.25 +0.4 36,291 - BACOVA_01538 0.25 +1.0 36,291 - BACOVA_01538 0.25 +0.1 36,344 + BACOVA_01538 0.33 +1.0 36,345 - BACOVA_01538 0.34 +0.1 36,345 - BACOVA_01538 0.34 +1.3 36,370 - BACOVA_01538 0.37 +0.6 36,370 - BACOVA_01538 0.37 -1.6 36,392 + BACOVA_01538 0.41 -0.2 36,392 + BACOVA_01538 0.41 -1.1 36,392 + BACOVA_01538 0.41 +1.5 36,393 - BACOVA_01538 0.41 -0.2 36,507 + BACOVA_01538 0.58 -0.2 36,528 + BACOVA_01538 0.61 +0.6 36,533 + BACOVA_01538 0.62 -0.1 36,535 + BACOVA_01538 0.62 -0.3 36,536 - BACOVA_01538 0.63 +0.4 36,536 - BACOVA_01538 0.63 +0.8 36,632 - BACOVA_01538 0.77 -0.0 36,798 - +1.5 36,805 + -1.6 36,835 + -0.4 36,843 - +0.6 36,850 + -0.8 36,850 + -0.3 36,928 + -1.3 36,928 + -0.2 36,988 + BACOVA_01539 0.12 -1.4 36,989 - BACOVA_01539 0.12 +1.3 36,989 - BACOVA_01539 0.12 +2.0 37,016 + BACOVA_01539 0.18 +0.4 37,017 - BACOVA_01539 0.18 +1.9 37,096 + BACOVA_01539 0.34 -1.0 37,186 + BACOVA_01539 0.51 -0.2 37,187 - BACOVA_01539 0.52 -0.1 37,273 + BACOVA_01539 0.69 +0.4 37,274 - BACOVA_01539 0.69 +1.5 37,274 - BACOVA_01539 0.69 +2.1 37,316 + BACOVA_01539 0.77 -0.5 37,316 + BACOVA_01539 0.77 -1.2 37,317 - BACOVA_01539 0.77 +1.3 37,319 + BACOVA_01539 0.78 -0.3 37,319 + BACOVA_01539 0.78 -1.1 37,319 + BACOVA_01539 0.78 -0.4 37,319 + BACOVA_01539 0.78 +0.6 37,319 + BACOVA_01539 0.78 -2.7 37,320 - BACOVA_01539 0.78 +1.8 37,321 + BACOVA_01539 0.78 -0.3 37,321 + BACOVA_01539 0.78 -0.0 37,321 + BACOVA_01539 0.78 -1.6 37,322 - BACOVA_01539 0.78 +1.7 37,322 - BACOVA_01539 0.78 +2.2 37,322 - BACOVA_01539 0.78 +0.7 37,323 + BACOVA_01539 0.79 +0.8 37,324 - BACOVA_01539 0.79 +1.3 37,326 + BACOVA_01539 0.79 -1.3 37,327 - BACOVA_01539 0.79 +1.0 37,430 + -0.7 37,490 - +1.8 37,504 - +1.1 37,586 + +0.9 37,603 - +0.4 37,609 + BACOVA_01540 0.10 +0.2 37,615 + BACOVA_01540 0.11 -2.0 37,616 - BACOVA_01540 0.11 +1.8 37,616 - BACOVA_01540 0.11 -0.4 37,616 - BACOVA_01540 0.11 +0.8 37,748 + BACOVA_01540 0.22 +0.1 37,749 - BACOVA_01540 0.22 +0.3 37,769 + BACOVA_01540 0.24 -0.8 37,770 - BACOVA_01540 0.24 +1.4
Or see this region's nucleotide sequence