Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_01248 and BACOVA_01249 are separated by 46 nucleotides BACOVA_01249 and BACOVA_01250 are separated by 27 nucleotides
BACOVA_01248: BACOVA_01248 - TonB-linked outer membrane protein, SusC/RagA family, at 31,945 to 35,388
_01248
BACOVA_01249: BACOVA_01249 - hypothetical protein, at 35,435 to 35,569
_01249
BACOVA_01250: BACOVA_01250 - sigma factor regulatory protein, FecR/PupR family, at 35,597 to 36,586
_01250
Position (kb)
35
36 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 34.442 kb on + strand, within BACOVA_01248 at 34.443 kb on - strand, within BACOVA_01248 at 34.447 kb on - strand, within BACOVA_01248 at 34.494 kb on + strand, within BACOVA_01248 at 34.494 kb on + strand, within BACOVA_01248 at 34.573 kb on - strand, within BACOVA_01248 at 34.594 kb on - strand, within BACOVA_01248 at 34.597 kb on + strand, within BACOVA_01248 at 34.598 kb on - strand, within BACOVA_01248 at 34.650 kb on + strand, within BACOVA_01248 at 34.719 kb on + strand, within BACOVA_01248 at 34.720 kb on - strand, within BACOVA_01248 at 34.769 kb on - strand, within BACOVA_01248 at 34.785 kb on + strand, within BACOVA_01248 at 34.785 kb on + strand, within BACOVA_01248 at 34.786 kb on - strand, within BACOVA_01248 at 34.786 kb on - strand, within BACOVA_01248 at 34.786 kb on - strand, within BACOVA_01248 at 34.788 kb on + strand, within BACOVA_01248 at 34.795 kb on + strand, within BACOVA_01248 at 34.848 kb on + strand, within BACOVA_01248 at 34.848 kb on + strand, within BACOVA_01248 at 34.858 kb on - strand, within BACOVA_01248 at 34.858 kb on - strand, within BACOVA_01248 at 34.859 kb on + strand, within BACOVA_01248 at 34.859 kb on + strand, within BACOVA_01248 at 34.898 kb on - strand, within BACOVA_01248 at 34.904 kb on + strand, within BACOVA_01248 at 34.929 kb on + strand, within BACOVA_01248 at 34.947 kb on + strand, within BACOVA_01248 at 34.947 kb on + strand, within BACOVA_01248 at 34.997 kb on - strand, within BACOVA_01248 at 35.067 kb on + strand at 35.068 kb on - strand at 35.142 kb on + strand at 35.189 kb on + strand at 35.266 kb on - strand at 35.306 kb on - strand at 35.383 kb on - strand at 35.415 kb on - strand at 35.423 kb on + strand at 35.519 kb on - strand, within BACOVA_01249 at 35.519 kb on - strand, within BACOVA_01249 at 35.582 kb on + strand at 35.583 kb on - strand at 35.586 kb on + strand at 35.586 kb on + strand at 35.589 kb on + strand at 35.589 kb on + strand at 35.605 kb on + strand at 35.608 kb on - strand at 35.671 kb on + strand at 35.671 kb on + strand at 35.758 kb on + strand, within BACOVA_01250 at 35.759 kb on - strand, within BACOVA_01250 at 35.759 kb on - strand, within BACOVA_01250 at 35.794 kb on + strand, within BACOVA_01250 at 35.800 kb on + strand, within BACOVA_01250 at 35.806 kb on - strand, within BACOVA_01250 at 35.863 kb on + strand, within BACOVA_01250 at 35.866 kb on - strand, within BACOVA_01250 at 35.881 kb on + strand, within BACOVA_01250 at 35.887 kb on + strand, within BACOVA_01250 at 35.887 kb on + strand, within BACOVA_01250 at 35.887 kb on + strand, within BACOVA_01250 at 35.888 kb on - strand, within BACOVA_01250 at 35.948 kb on - strand, within BACOVA_01250 at 35.972 kb on + strand, within BACOVA_01250 at 35.973 kb on - strand, within BACOVA_01250 at 35.988 kb on + strand, within BACOVA_01250 at 35.989 kb on - strand, within BACOVA_01250 at 36.014 kb on + strand, within BACOVA_01250 at 36.015 kb on - strand, within BACOVA_01250 at 36.015 kb on - strand, within BACOVA_01250 at 36.253 kb on + strand, within BACOVA_01250 at 36.283 kb on + strand, within BACOVA_01250 at 36.291 kb on - strand, within BACOVA_01250 at 36.294 kb on - strand, within BACOVA_01250 at 36.359 kb on - strand, within BACOVA_01250 at 36.467 kb on + strand, within BACOVA_01250 at 36.467 kb on + strand, within BACOVA_01250 at 36.469 kb on + strand, within BACOVA_01250 at 36.490 kb on + strand at 36.490 kb on + strand at 36.491 kb on - strand at 36.529 kb on - strand at 36.529 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 34,442 + BACOVA_01248 0.73 +0.1 34,443 - BACOVA_01248 0.73 +0.8 34,447 - BACOVA_01248 0.73 -0.0 34,494 + BACOVA_01248 0.74 -0.6 34,494 + BACOVA_01248 0.74 -1.2 34,573 - BACOVA_01248 0.76 +0.3 34,594 - BACOVA_01248 0.77 +1.3 34,597 + BACOVA_01248 0.77 -0.1 34,598 - BACOVA_01248 0.77 +1.9 34,650 + BACOVA_01248 0.79 +0.3 34,719 + BACOVA_01248 0.81 -1.1 34,720 - BACOVA_01248 0.81 +0.9 34,769 - BACOVA_01248 0.82 +0.6 34,785 + BACOVA_01248 0.82 +0.1 34,785 + BACOVA_01248 0.82 +0.2 34,786 - BACOVA_01248 0.82 +1.0 34,786 - BACOVA_01248 0.82 +0.4 34,786 - BACOVA_01248 0.82 -0.7 34,788 + BACOVA_01248 0.83 -1.4 34,795 + BACOVA_01248 0.83 -0.2 34,848 + BACOVA_01248 0.84 +1.4 34,848 + BACOVA_01248 0.84 -0.8 34,858 - BACOVA_01248 0.85 +1.0 34,858 - BACOVA_01248 0.85 +0.7 34,859 + BACOVA_01248 0.85 -0.2 34,859 + BACOVA_01248 0.85 -0.1 34,898 - BACOVA_01248 0.86 -1.4 34,904 + BACOVA_01248 0.86 -2.7 34,929 + BACOVA_01248 0.87 -1.1 34,947 + BACOVA_01248 0.87 -0.1 34,947 + BACOVA_01248 0.87 +0.3 34,997 - BACOVA_01248 0.89 -0.3 35,067 + +2.2 35,068 - -1.8 35,142 + -1.2 35,189 + +0.4 35,266 - +1.4 35,306 - +0.2 35,383 - -0.3 35,415 - +1.6 35,423 + +0.0 35,519 - BACOVA_01249 0.62 +2.5 35,519 - BACOVA_01249 0.62 +2.3 35,582 + +0.7 35,583 - +2.0 35,586 + +1.5 35,586 + +1.1 35,589 + -0.4 35,589 + -0.9 35,605 + +2.0 35,608 - +2.2 35,671 + -1.8 35,671 + -0.0 35,758 + BACOVA_01250 0.16 -1.1 35,759 - BACOVA_01250 0.16 +1.9 35,759 - BACOVA_01250 0.16 +0.9 35,794 + BACOVA_01250 0.20 +1.4 35,800 + BACOVA_01250 0.21 -0.3 35,806 - BACOVA_01250 0.21 +1.9 35,863 + BACOVA_01250 0.27 +0.6 35,866 - BACOVA_01250 0.27 +1.0 35,881 + BACOVA_01250 0.29 +0.4 35,887 + BACOVA_01250 0.29 -0.0 35,887 + BACOVA_01250 0.29 -0.3 35,887 + BACOVA_01250 0.29 -0.2 35,888 - BACOVA_01250 0.29 +2.8 35,948 - BACOVA_01250 0.35 +2.0 35,972 + BACOVA_01250 0.38 -0.7 35,973 - BACOVA_01250 0.38 +3.1 35,988 + BACOVA_01250 0.39 -0.0 35,989 - BACOVA_01250 0.40 +2.2 36,014 + BACOVA_01250 0.42 -0.2 36,015 - BACOVA_01250 0.42 +3.0 36,015 - BACOVA_01250 0.42 +2.3 36,253 + BACOVA_01250 0.66 -0.3 36,283 + BACOVA_01250 0.69 +0.3 36,291 - BACOVA_01250 0.70 +3.9 36,294 - BACOVA_01250 0.70 +1.7 36,359 - BACOVA_01250 0.77 +1.9 36,467 + BACOVA_01250 0.88 +0.4 36,467 + BACOVA_01250 0.88 +0.4 36,469 + BACOVA_01250 0.88 +0.5 36,490 + -0.6 36,490 + +0.5 36,491 - +1.7 36,529 - +2.4 36,529 - +2.6
Or see this region's nucleotide sequence