Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00867

Experiment: D-Galactose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00866 and BACOVA_00867 are separated by 157 nucleotidesBACOVA_00867 and BACOVA_00869 are separated by 11 nucleotidesBACOVA_00869 and BACOVA_00868 overlap by 31 nucleotides BACOVA_00866: BACOVA_00866 - TonB-linked outer membrane protein, SusC/RagA family, at 119,934 to 123,062 _00866 BACOVA_00867: BACOVA_00867 - hypothetical protein, at 123,220 to 124,329 _00867 BACOVA_00869: BACOVA_00869 - hypothetical protein, at 124,341 to 124,448 _00869 BACOVA_00868: BACOVA_00868 - adenosylmethionine-8-amino-7-oxononanoate transaminase, at 124,418 to 126,832 _00868 Position (kb) 123 124 125Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 122.273 kb on - strand, within BACOVA_00866at 122.273 kb on - strand, within BACOVA_00866at 122.326 kb on - strand, within BACOVA_00866at 122.387 kb on + strand, within BACOVA_00866at 122.387 kb on + strand, within BACOVA_00866at 122.387 kb on + strand, within BACOVA_00866at 122.388 kb on - strand, within BACOVA_00866at 122.446 kb on - strand, within BACOVA_00866at 122.460 kb on + strand, within BACOVA_00866at 122.460 kb on + strand, within BACOVA_00866at 122.460 kb on + strand, within BACOVA_00866at 122.514 kb on + strand, within BACOVA_00866at 122.515 kb on - strand, within BACOVA_00866at 122.518 kb on + strand, within BACOVA_00866at 122.519 kb on - strand, within BACOVA_00866at 122.544 kb on - strand, within BACOVA_00866at 122.544 kb on - strand, within BACOVA_00866at 122.579 kb on + strand, within BACOVA_00866at 122.580 kb on - strand, within BACOVA_00866at 122.709 kb on - strand, within BACOVA_00866at 122.728 kb on + strand, within BACOVA_00866at 122.728 kb on + strand, within BACOVA_00866at 122.733 kb on + strand, within BACOVA_00866at 122.734 kb on - strand, within BACOVA_00866at 122.734 kb on - strand, within BACOVA_00866at 122.742 kb on + strand, within BACOVA_00866at 122.743 kb on - strand, within BACOVA_00866at 122.759 kb on + strandat 122.760 kb on - strandat 122.783 kb on + strandat 122.783 kb on + strandat 122.784 kb on - strandat 122.784 kb on - strandat 122.784 kb on - strandat 122.830 kb on - strandat 122.844 kb on + strandat 122.844 kb on + strandat 122.845 kb on - strandat 122.845 kb on - strandat 122.925 kb on + strandat 122.926 kb on - strandat 123.001 kb on + strandat 123.002 kb on - strandat 123.003 kb on + strandat 123.004 kb on - strandat 123.007 kb on - strandat 123.007 kb on - strandat 123.008 kb on + strandat 123.009 kb on - strandat 123.042 kb on + strandat 123.096 kb on - strandat 123.096 kb on - strandat 123.096 kb on - strandat 123.154 kb on + strandat 123.159 kb on + strandat 123.160 kb on - strandat 123.177 kb on + strandat 123.178 kb on - strandat 123.198 kb on - strandat 123.201 kb on + strandat 123.202 kb on - strandat 123.203 kb on + strandat 123.240 kb on + strandat 123.240 kb on - strandat 123.240 kb on - strandat 123.312 kb on + strandat 123.313 kb on - strandat 123.403 kb on + strand, within BACOVA_00867at 123.403 kb on + strand, within BACOVA_00867at 123.403 kb on + strand, within BACOVA_00867at 123.404 kb on - strand, within BACOVA_00867at 123.423 kb on + strand, within BACOVA_00867at 123.424 kb on - strand, within BACOVA_00867at 123.442 kb on - strand, within BACOVA_00867at 123.471 kb on + strand, within BACOVA_00867at 123.534 kb on - strand, within BACOVA_00867at 123.578 kb on + strand, within BACOVA_00867at 123.578 kb on + strand, within BACOVA_00867at 123.628 kb on + strand, within BACOVA_00867at 123.644 kb on + strand, within BACOVA_00867at 123.645 kb on - strand, within BACOVA_00867at 123.645 kb on - strand, within BACOVA_00867at 123.647 kb on - strand, within BACOVA_00867at 123.698 kb on - strand, within BACOVA_00867at 123.709 kb on - strand, within BACOVA_00867at 123.741 kb on + strand, within BACOVA_00867at 123.742 kb on - strand, within BACOVA_00867at 123.745 kb on + strand, within BACOVA_00867at 123.746 kb on - strand, within BACOVA_00867at 123.774 kb on - strand, within BACOVA_00867at 123.778 kb on - strand, within BACOVA_00867at 123.795 kb on - strand, within BACOVA_00867at 123.797 kb on - strand, within BACOVA_00867at 123.799 kb on + strand, within BACOVA_00867at 123.799 kb on + strand, within BACOVA_00867at 123.800 kb on - strand, within BACOVA_00867at 123.800 kb on - strand, within BACOVA_00867at 123.800 kb on - strand, within BACOVA_00867at 123.800 kb on - strand, within BACOVA_00867at 123.873 kb on + strand, within BACOVA_00867at 123.874 kb on - strand, within BACOVA_00867at 123.879 kb on + strand, within BACOVA_00867at 123.879 kb on + strand, within BACOVA_00867at 123.924 kb on + strand, within BACOVA_00867at 123.924 kb on + strand, within BACOVA_00867at 123.925 kb on - strand, within BACOVA_00867at 124.004 kb on + strand, within BACOVA_00867at 124.082 kb on - strand, within BACOVA_00867at 124.175 kb on - strand, within BACOVA_00867at 124.192 kb on + strand, within BACOVA_00867at 124.196 kb on + strand, within BACOVA_00867at 124.196 kb on + strand, within BACOVA_00867at 124.197 kb on - strand, within BACOVA_00867at 124.222 kb on + strandat 124.229 kb on - strandat 124.250 kb on + strandat 124.280 kb on - strandat 124.280 kb on - strandat 124.313 kb on - strandat 124.378 kb on + strand, within BACOVA_00869at 124.438 kb on - strandat 124.491 kb on - strandat 124.491 kb on - strandat 124.491 kb on - strandat 124.491 kb on - strandat 124.508 kb on - strandat 124.548 kb on + strandat 124.549 kb on - strandat 124.552 kb on - strandat 124.588 kb on + strandat 124.589 kb on - strandat 124.595 kb on + strandat 124.606 kb on + strandat 124.654 kb on - strandat 124.727 kb on - strand, within BACOVA_00868at 124.830 kb on - strand, within BACOVA_00868at 124.964 kb on - strand, within BACOVA_00868at 124.988 kb on + strand, within BACOVA_00868at 124.990 kb on + strand, within BACOVA_00868at 124.990 kb on + strand, within BACOVA_00868at 125.093 kb on - strand, within BACOVA_00868at 125.093 kb on - strand, within BACOVA_00868at 125.134 kb on + strand, within BACOVA_00868at 125.184 kb on + strand, within BACOVA_00868at 125.210 kb on - strand, within BACOVA_00868at 125.290 kb on + strand, within BACOVA_00868at 125.290 kb on + strand, within BACOVA_00868at 125.290 kb on + strand, within BACOVA_00868at 125.291 kb on - strand, within BACOVA_00868at 125.302 kb on + strand, within BACOVA_00868

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C)
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122,273 - BACOVA_00866 0.75 -0.6
122,273 - BACOVA_00866 0.75 -1.7
122,326 - BACOVA_00866 0.76 -0.8
122,387 + BACOVA_00866 0.78 -0.1
122,387 + BACOVA_00866 0.78 -1.0
122,387 + BACOVA_00866 0.78 -0.3
122,388 - BACOVA_00866 0.78 +0.8
122,446 - BACOVA_00866 0.80 -0.4
122,460 + BACOVA_00866 0.81 +0.4
122,460 + BACOVA_00866 0.81 +1.6
122,460 + BACOVA_00866 0.81 -0.6
122,514 + BACOVA_00866 0.82 -0.8
122,515 - BACOVA_00866 0.82 +1.7
122,518 + BACOVA_00866 0.83 -2.5
122,519 - BACOVA_00866 0.83 -0.1
122,544 - BACOVA_00866 0.83 +1.7
122,544 - BACOVA_00866 0.83 +0.7
122,579 + BACOVA_00866 0.85 -2.0
122,580 - BACOVA_00866 0.85 -0.7
122,709 - BACOVA_00866 0.89 -0.3
122,728 + BACOVA_00866 0.89 +0.6
122,728 + BACOVA_00866 0.89 +2.9
122,733 + BACOVA_00866 0.89 +1.1
122,734 - BACOVA_00866 0.89 +2.2
122,734 - BACOVA_00866 0.89 -2.1
122,742 + BACOVA_00866 0.90 +1.4
122,743 - BACOVA_00866 0.90 -0.5
122,759 + +1.1
122,760 - -0.4
122,783 + +1.2
122,783 + +0.6
122,784 - +1.0
122,784 - +0.5
122,784 - -0.5
122,830 - +0.2
122,844 + -0.8
122,844 + -0.1
122,845 - -0.6
122,845 - +0.2
122,925 + +0.5
122,926 - +1.7
123,001 + -0.8
123,002 - -0.5
123,003 + -1.1
123,004 - -1.3
123,007 - -1.1
123,007 - +0.7
123,008 + -0.6
123,009 - +0.0
123,042 + +0.2
123,096 - +0.1
123,096 - -0.6
123,096 - -2.1
123,154 + +0.5
123,159 + -0.3
123,160 - +1.7
123,177 + +1.4
123,178 - +0.7
123,198 - -1.7
123,201 + -4.2
123,202 - -4.1
123,203 + +0.9
123,240 + +0.2
123,240 - -1.4
123,240 - -0.6
123,312 + -1.6
123,313 - -1.1
123,403 + BACOVA_00867 0.16 -1.2
123,403 + BACOVA_00867 0.16 -4.2
123,403 + BACOVA_00867 0.16 -2.2
123,404 - BACOVA_00867 0.17 -1.8
123,423 + BACOVA_00867 0.18 -1.1
123,424 - BACOVA_00867 0.18 -1.7
123,442 - BACOVA_00867 0.20 -0.5
123,471 + BACOVA_00867 0.23 -0.6
123,534 - BACOVA_00867 0.28 -1.0
123,578 + BACOVA_00867 0.32 +1.2
123,578 + BACOVA_00867 0.32 -1.9
123,628 + BACOVA_00867 0.37 +0.2
123,644 + BACOVA_00867 0.38 +0.9
123,645 - BACOVA_00867 0.38 -1.7
123,645 - BACOVA_00867 0.38 -1.3
123,647 - BACOVA_00867 0.38 -1.6
123,698 - BACOVA_00867 0.43 -1.6
123,709 - BACOVA_00867 0.44 +0.7
123,741 + BACOVA_00867 0.47 -0.8
123,742 - BACOVA_00867 0.47 -3.2
123,745 + BACOVA_00867 0.47 -1.5
123,746 - BACOVA_00867 0.47 -1.2
123,774 - BACOVA_00867 0.50 -2.6
123,778 - BACOVA_00867 0.50 +0.0
123,795 - BACOVA_00867 0.52 -3.4
123,797 - BACOVA_00867 0.52 -2.5
123,799 + BACOVA_00867 0.52 -2.2
123,799 + BACOVA_00867 0.52 -0.3
123,800 - BACOVA_00867 0.52 -1.0
123,800 - BACOVA_00867 0.52 +1.1
123,800 - BACOVA_00867 0.52 -0.9
123,800 - BACOVA_00867 0.52 -3.2
123,873 + BACOVA_00867 0.59 -1.3
123,874 - BACOVA_00867 0.59 -2.2
123,879 + BACOVA_00867 0.59 -0.3
123,879 + BACOVA_00867 0.59 -1.1
123,924 + BACOVA_00867 0.63 +1.9
123,924 + BACOVA_00867 0.63 -0.6
123,925 - BACOVA_00867 0.64 -0.2
124,004 + BACOVA_00867 0.71 +0.8
124,082 - BACOVA_00867 0.78 -0.5
124,175 - BACOVA_00867 0.86 -3.4
124,192 + BACOVA_00867 0.88 -1.9
124,196 + BACOVA_00867 0.88 -1.1
124,196 + BACOVA_00867 0.88 +0.1
124,197 - BACOVA_00867 0.88 -1.5
124,222 + -0.3
124,229 - -0.7
124,250 + -0.6
124,280 - -2.4
124,280 - +0.0
124,313 - -0.4
124,378 + BACOVA_00869 0.34 -0.9
124,438 - -1.9
124,491 - -0.3
124,491 - -1.9
124,491 - -0.5
124,491 - -2.6
124,508 - -1.0
124,548 + +0.4
124,549 - -2.1
124,552 - -1.5
124,588 + +0.8
124,589 - -0.9
124,595 + -0.1
124,606 + -0.2
124,654 - -1.9
124,727 - BACOVA_00868 0.13 -0.8
124,830 - BACOVA_00868 0.17 -1.9
124,964 - BACOVA_00868 0.23 -2.5
124,988 + BACOVA_00868 0.24 -2.3
124,990 + BACOVA_00868 0.24 -3.0
124,990 + BACOVA_00868 0.24 -0.6
125,093 - BACOVA_00868 0.28 -0.5
125,093 - BACOVA_00868 0.28 +1.1
125,134 + BACOVA_00868 0.30 -0.8
125,184 + BACOVA_00868 0.32 -1.4
125,210 - BACOVA_00868 0.33 -3.0
125,290 + BACOVA_00868 0.36 -0.6
125,290 + BACOVA_00868 0.36 -0.4
125,290 + BACOVA_00868 0.36 -1.2
125,291 - BACOVA_00868 0.36 -0.1
125,302 + BACOVA_00868 0.37 -1.8

Or see this region's nucleotide sequence