Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00859

Experiment: D-Galactose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00858 and BACOVA_00859 are separated by 63 nucleotidesBACOVA_00859 and BACOVA_00860 are separated by 21 nucleotides BACOVA_00858: BACOVA_00858 - mannonate dehydratase, at 112,784 to 113,953 _00858 BACOVA_00859: BACOVA_00859 - oxidoreductase, short chain dehydrogenase/reductase family protein, at 114,017 to 114,829 _00859 BACOVA_00860: BACOVA_00860 - transcriptional regulator, LacI family, at 114,851 to 115,924 _00860 Position (kb) 114 115Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 113.041 kb on + strand, within BACOVA_00858at 113.131 kb on + strand, within BACOVA_00858at 113.150 kb on - strand, within BACOVA_00858at 113.150 kb on - strand, within BACOVA_00858at 113.158 kb on + strand, within BACOVA_00858at 113.159 kb on - strand, within BACOVA_00858at 113.162 kb on + strand, within BACOVA_00858at 113.163 kb on - strand, within BACOVA_00858at 113.220 kb on - strand, within BACOVA_00858at 113.227 kb on + strand, within BACOVA_00858at 113.227 kb on + strand, within BACOVA_00858at 113.228 kb on - strand, within BACOVA_00858at 113.229 kb on + strand, within BACOVA_00858at 113.230 kb on - strand, within BACOVA_00858at 113.230 kb on - strand, within BACOVA_00858at 113.338 kb on + strand, within BACOVA_00858at 113.339 kb on - strand, within BACOVA_00858at 113.354 kb on + strand, within BACOVA_00858at 113.416 kb on + strand, within BACOVA_00858at 113.416 kb on + strand, within BACOVA_00858at 113.417 kb on - strand, within BACOVA_00858at 113.417 kb on - strand, within BACOVA_00858at 113.420 kb on - strand, within BACOVA_00858at 113.477 kb on - strand, within BACOVA_00858at 113.480 kb on + strand, within BACOVA_00858at 113.481 kb on - strand, within BACOVA_00858at 113.481 kb on - strand, within BACOVA_00858at 113.494 kb on + strand, within BACOVA_00858at 113.496 kb on + strand, within BACOVA_00858at 113.497 kb on - strand, within BACOVA_00858at 113.576 kb on - strand, within BACOVA_00858at 113.593 kb on + strand, within BACOVA_00858at 113.593 kb on + strand, within BACOVA_00858at 113.594 kb on - strand, within BACOVA_00858at 113.625 kb on - strand, within BACOVA_00858at 113.625 kb on - strand, within BACOVA_00858at 113.638 kb on + strand, within BACOVA_00858at 113.640 kb on + strand, within BACOVA_00858at 113.641 kb on - strand, within BACOVA_00858at 113.641 kb on - strand, within BACOVA_00858at 113.644 kb on + strand, within BACOVA_00858at 113.649 kb on - strand, within BACOVA_00858at 113.681 kb on - strand, within BACOVA_00858at 113.735 kb on - strand, within BACOVA_00858at 113.750 kb on + strand, within BACOVA_00858at 113.759 kb on + strand, within BACOVA_00858at 113.800 kb on + strand, within BACOVA_00858at 113.820 kb on - strand, within BACOVA_00858at 113.820 kb on - strand, within BACOVA_00858at 113.862 kb on - strandat 113.862 kb on - strandat 113.862 kb on - strandat 113.866 kb on + strandat 113.887 kb on + strandat 113.888 kb on - strandat 113.888 kb on - strandat 113.891 kb on - strandat 113.915 kb on - strandat 113.922 kb on + strandat 113.945 kb on + strandat 113.946 kb on - strandat 113.946 kb on - strandat 113.949 kb on + strandat 113.950 kb on - strandat 113.954 kb on - strandat 113.954 kb on - strandat 113.956 kb on + strandat 113.956 kb on + strandat 113.957 kb on - strandat 113.970 kb on + strandat 113.970 kb on + strandat 113.980 kb on + strandat 113.981 kb on - strandat 114.005 kb on - strandat 114.015 kb on + strandat 114.015 kb on + strandat 114.019 kb on - strandat 114.019 kb on - strandat 114.023 kb on - strandat 114.056 kb on + strandat 114.056 kb on + strandat 114.056 kb on + strandat 114.057 kb on - strandat 114.057 kb on - strandat 114.062 kb on - strandat 114.111 kb on + strand, within BACOVA_00859at 114.139 kb on - strand, within BACOVA_00859at 114.149 kb on - strand, within BACOVA_00859at 114.196 kb on + strand, within BACOVA_00859at 114.295 kb on + strand, within BACOVA_00859at 114.296 kb on - strand, within BACOVA_00859at 114.297 kb on + strand, within BACOVA_00859at 114.297 kb on + strand, within BACOVA_00859at 114.297 kb on + strand, within BACOVA_00859at 114.298 kb on - strand, within BACOVA_00859at 114.298 kb on - strand, within BACOVA_00859at 114.301 kb on + strand, within BACOVA_00859at 114.316 kb on + strand, within BACOVA_00859at 114.316 kb on + strand, within BACOVA_00859at 114.342 kb on - strand, within BACOVA_00859at 114.386 kb on + strand, within BACOVA_00859at 114.428 kb on + strand, within BACOVA_00859at 114.437 kb on - strand, within BACOVA_00859at 114.444 kb on - strand, within BACOVA_00859at 114.444 kb on - strand, within BACOVA_00859at 114.448 kb on + strand, within BACOVA_00859at 114.524 kb on - strand, within BACOVA_00859at 114.541 kb on + strand, within BACOVA_00859at 114.564 kb on - strand, within BACOVA_00859at 114.572 kb on - strand, within BACOVA_00859at 114.580 kb on - strand, within BACOVA_00859at 114.622 kb on + strand, within BACOVA_00859at 114.622 kb on + strand, within BACOVA_00859at 114.639 kb on + strand, within BACOVA_00859at 114.675 kb on - strand, within BACOVA_00859at 114.680 kb on + strand, within BACOVA_00859at 114.757 kb on + strandat 114.758 kb on - strandat 114.764 kb on - strandat 114.790 kb on + strandat 114.797 kb on + strandat 114.818 kb on + strandat 114.846 kb on + strandat 114.852 kb on + strandat 114.852 kb on + strandat 114.874 kb on - strandat 114.904 kb on + strandat 114.967 kb on + strand, within BACOVA_00860at 115.040 kb on - strand, within BACOVA_00860at 115.101 kb on + strand, within BACOVA_00860at 115.136 kb on - strand, within BACOVA_00860at 115.148 kb on + strand, within BACOVA_00860at 115.148 kb on + strand, within BACOVA_00860at 115.148 kb on + strand, within BACOVA_00860at 115.193 kb on - strand, within BACOVA_00860at 115.195 kb on - strand, within BACOVA_00860at 115.297 kb on + strand, within BACOVA_00860at 115.337 kb on + strand, within BACOVA_00860at 115.338 kb on - strand, within BACOVA_00860at 115.399 kb on - strand, within BACOVA_00860at 115.416 kb on + strand, within BACOVA_00860at 115.455 kb on + strand, within BACOVA_00860at 115.456 kb on - strand, within BACOVA_00860at 115.456 kb on - strand, within BACOVA_00860at 115.456 kb on - strand, within BACOVA_00860at 115.461 kb on + strand, within BACOVA_00860at 115.462 kb on - strand, within BACOVA_00860at 115.462 kb on - strand, within BACOVA_00860at 115.462 kb on - strand, within BACOVA_00860at 115.462 kb on - strand, within BACOVA_00860at 115.466 kb on + strand, within BACOVA_00860at 115.467 kb on - strand, within BACOVA_00860at 115.467 kb on - strand, within BACOVA_00860at 115.532 kb on + strand, within BACOVA_00860at 115.570 kb on + strand, within BACOVA_00860at 115.591 kb on + strand, within BACOVA_00860at 115.591 kb on + strand, within BACOVA_00860at 115.592 kb on - strand, within BACOVA_00860at 115.594 kb on - strand, within BACOVA_00860at 115.594 kb on - strand, within BACOVA_00860at 115.659 kb on - strand, within BACOVA_00860at 115.659 kb on - strand, within BACOVA_00860at 115.659 kb on - strand, within BACOVA_00860at 115.661 kb on - strand, within BACOVA_00860at 115.684 kb on - strand, within BACOVA_00860at 115.708 kb on + strand, within BACOVA_00860at 115.725 kb on + strand, within BACOVA_00860at 115.726 kb on - strand, within BACOVA_00860at 115.726 kb on - strand, within BACOVA_00860at 115.778 kb on + strand, within BACOVA_00860at 115.778 kb on + strand, within BACOVA_00860at 115.778 kb on + strand, within BACOVA_00860at 115.779 kb on - strand, within BACOVA_00860at 115.779 kb on - strand, within BACOVA_00860at 115.823 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C)
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113,041 + BACOVA_00858 0.22 +0.2
113,131 + BACOVA_00858 0.30 -0.3
113,150 - BACOVA_00858 0.31 +0.4
113,150 - BACOVA_00858 0.31 +1.0
113,158 + BACOVA_00858 0.32 -1.0
113,159 - BACOVA_00858 0.32 -0.1
113,162 + BACOVA_00858 0.32 -1.2
113,163 - BACOVA_00858 0.32 +0.4
113,220 - BACOVA_00858 0.37 +0.4
113,227 + BACOVA_00858 0.38 -0.5
113,227 + BACOVA_00858 0.38 -0.1
113,228 - BACOVA_00858 0.38 -0.5
113,229 + BACOVA_00858 0.38 +0.0
113,230 - BACOVA_00858 0.38 -2.4
113,230 - BACOVA_00858 0.38 +0.5
113,338 + BACOVA_00858 0.47 -0.7
113,339 - BACOVA_00858 0.47 -1.9
113,354 + BACOVA_00858 0.49 +0.9
113,416 + BACOVA_00858 0.54 +0.4
113,416 + BACOVA_00858 0.54 -1.6
113,417 - BACOVA_00858 0.54 -1.0
113,417 - BACOVA_00858 0.54 +2.1
113,420 - BACOVA_00858 0.54 -0.2
113,477 - BACOVA_00858 0.59 +0.1
113,480 + BACOVA_00858 0.59 +0.7
113,481 - BACOVA_00858 0.60 -1.8
113,481 - BACOVA_00858 0.60 +0.5
113,494 + BACOVA_00858 0.61 +0.2
113,496 + BACOVA_00858 0.61 -3.0
113,497 - BACOVA_00858 0.61 +0.1
113,576 - BACOVA_00858 0.68 -0.6
113,593 + BACOVA_00858 0.69 -1.0
113,593 + BACOVA_00858 0.69 -0.8
113,594 - BACOVA_00858 0.69 +1.2
113,625 - BACOVA_00858 0.72 +0.3
113,625 - BACOVA_00858 0.72 +1.2
113,638 + BACOVA_00858 0.73 +0.9
113,640 + BACOVA_00858 0.73 +0.1
113,641 - BACOVA_00858 0.73 +1.1
113,641 - BACOVA_00858 0.73 +0.8
113,644 + BACOVA_00858 0.74 -0.1
113,649 - BACOVA_00858 0.74 -2.2
113,681 - BACOVA_00858 0.77 +2.7
113,735 - BACOVA_00858 0.81 +1.6
113,750 + BACOVA_00858 0.83 -1.7
113,759 + BACOVA_00858 0.83 -1.3
113,800 + BACOVA_00858 0.87 +0.1
113,820 - BACOVA_00858 0.89 -0.2
113,820 - BACOVA_00858 0.89 +0.1
113,862 - +0.5
113,862 - -1.0
113,862 - +0.9
113,866 + +1.7
113,887 + -1.6
113,888 - -0.2
113,888 - +0.7
113,891 - -1.3
113,915 - -0.3
113,922 + +0.8
113,945 + -1.1
113,946 - -0.6
113,946 - -0.6
113,949 + +0.3
113,950 - -1.0
113,954 - -0.3
113,954 - -2.2
113,956 + -1.3
113,956 + -1.4
113,957 - +0.0
113,970 + +0.5
113,970 + -0.9
113,980 + -0.4
113,981 - -2.2
114,005 - +0.3
114,015 + -3.0
114,015 + +1.7
114,019 - -0.3
114,019 - -0.5
114,023 - +0.7
114,056 + -1.3
114,056 + -0.4
114,056 + +0.2
114,057 - +2.2
114,057 - -1.0
114,062 - -0.2
114,111 + BACOVA_00859 0.12 -0.1
114,139 - BACOVA_00859 0.15 -0.9
114,149 - BACOVA_00859 0.16 +1.2
114,196 + BACOVA_00859 0.22 -0.0
114,295 + BACOVA_00859 0.34 -0.2
114,296 - BACOVA_00859 0.34 +0.2
114,297 + BACOVA_00859 0.34 -3.4
114,297 + BACOVA_00859 0.34 +0.5
114,297 + BACOVA_00859 0.34 +1.3
114,298 - BACOVA_00859 0.35 +0.0
114,298 - BACOVA_00859 0.35 +1.2
114,301 + BACOVA_00859 0.35 -0.6
114,316 + BACOVA_00859 0.37 -3.3
114,316 + BACOVA_00859 0.37 -1.7
114,342 - BACOVA_00859 0.40 +0.5
114,386 + BACOVA_00859 0.45 -0.3
114,428 + BACOVA_00859 0.51 +0.8
114,437 - BACOVA_00859 0.52 -1.6
114,444 - BACOVA_00859 0.53 -1.1
114,444 - BACOVA_00859 0.53 -0.6
114,448 + BACOVA_00859 0.53 +1.0
114,524 - BACOVA_00859 0.62 -0.1
114,541 + BACOVA_00859 0.64 +0.7
114,564 - BACOVA_00859 0.67 +0.3
114,572 - BACOVA_00859 0.68 +0.9
114,580 - BACOVA_00859 0.69 -0.7
114,622 + BACOVA_00859 0.74 -0.4
114,622 + BACOVA_00859 0.74 -1.9
114,639 + BACOVA_00859 0.77 -0.2
114,675 - BACOVA_00859 0.81 +1.1
114,680 + BACOVA_00859 0.82 -0.9
114,757 + +1.1
114,758 - +0.4
114,764 - +1.0
114,790 + -1.2
114,797 + +2.6
114,818 + +0.4
114,846 + -1.5
114,852 + -0.9
114,852 + -1.1
114,874 - -0.3
114,904 + -1.2
114,967 + BACOVA_00860 0.11 -1.5
115,040 - BACOVA_00860 0.18 +0.9
115,101 + BACOVA_00860 0.23 -0.4
115,136 - BACOVA_00860 0.27 +0.6
115,148 + BACOVA_00860 0.28 -2.2
115,148 + BACOVA_00860 0.28 -0.5
115,148 + BACOVA_00860 0.28 -0.7
115,193 - BACOVA_00860 0.32 -0.7
115,195 - BACOVA_00860 0.32 +0.2
115,297 + BACOVA_00860 0.42 -1.2
115,337 + BACOVA_00860 0.45 -1.9
115,338 - BACOVA_00860 0.45 +0.1
115,399 - BACOVA_00860 0.51 -0.9
115,416 + BACOVA_00860 0.53 -0.2
115,455 + BACOVA_00860 0.56 +1.2
115,456 - BACOVA_00860 0.56 -0.3
115,456 - BACOVA_00860 0.56 -0.0
115,456 - BACOVA_00860 0.56 -0.8
115,461 + BACOVA_00860 0.57 +0.2
115,462 - BACOVA_00860 0.57 -1.1
115,462 - BACOVA_00860 0.57 +0.0
115,462 - BACOVA_00860 0.57 -1.8
115,462 - BACOVA_00860 0.57 -0.4
115,466 + BACOVA_00860 0.57 -0.2
115,467 - BACOVA_00860 0.57 +0.4
115,467 - BACOVA_00860 0.57 -2.6
115,532 + BACOVA_00860 0.63 +0.8
115,570 + BACOVA_00860 0.67 +2.5
115,591 + BACOVA_00860 0.69 +0.1
115,591 + BACOVA_00860 0.69 -0.8
115,592 - BACOVA_00860 0.69 +0.2
115,594 - BACOVA_00860 0.69 -1.3
115,594 - BACOVA_00860 0.69 +1.0
115,659 - BACOVA_00860 0.75 -1.5
115,659 - BACOVA_00860 0.75 +0.0
115,659 - BACOVA_00860 0.75 -2.0
115,661 - BACOVA_00860 0.75 -0.1
115,684 - BACOVA_00860 0.78 -0.4
115,708 + BACOVA_00860 0.80 -0.1
115,725 + BACOVA_00860 0.81 +0.9
115,726 - BACOVA_00860 0.81 +0.5
115,726 - BACOVA_00860 0.81 +0.5
115,778 + BACOVA_00860 0.86 +0.4
115,778 + BACOVA_00860 0.86 +0.0
115,778 + BACOVA_00860 0.86 -0.4
115,779 - BACOVA_00860 0.86 +1.3
115,779 - BACOVA_00860 0.86 +0.6
115,823 + +0.1

Or see this region's nucleotide sequence