Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00385 and BACOVA_00386 are separated by 0 nucleotides BACOVA_00386 and BACOVA_00388 are separated by 32 nucleotides
BACOVA_00385: BACOVA_00385 - hypothetical protein, at 8,035 to 10,191
_00385
BACOVA_00386: BACOVA_00386 - hypothetical protein, at 10,192 to 12,351
_00386
BACOVA_00388: BACOVA_00388 - anaerobic sulfatase maturase, at 12,384 to 13,628
_00388
Position (kb)
10
11
12
13 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 9.264 kb on + strand, within BACOVA_00385 at 9.349 kb on - strand, within BACOVA_00385 at 9.349 kb on - strand, within BACOVA_00385 at 9.350 kb on + strand, within BACOVA_00385 at 9.459 kb on + strand, within BACOVA_00385 at 9.464 kb on + strand, within BACOVA_00385 at 9.465 kb on - strand, within BACOVA_00385 at 9.499 kb on - strand, within BACOVA_00385 at 9.565 kb on - strand, within BACOVA_00385 at 9.608 kb on + strand, within BACOVA_00385 at 9.608 kb on + strand, within BACOVA_00385 at 9.608 kb on + strand, within BACOVA_00385 at 9.683 kb on - strand, within BACOVA_00385 at 9.683 kb on - strand, within BACOVA_00385 at 9.691 kb on - strand, within BACOVA_00385 at 9.719 kb on - strand, within BACOVA_00385 at 9.747 kb on - strand, within BACOVA_00385 at 9.794 kb on + strand, within BACOVA_00385 at 9.847 kb on - strand, within BACOVA_00385 at 9.847 kb on - strand, within BACOVA_00385 at 9.904 kb on + strand, within BACOVA_00385 at 9.909 kb on + strand, within BACOVA_00385 at 9.910 kb on - strand, within BACOVA_00385 at 9.913 kb on - strand, within BACOVA_00385 at 9.975 kb on + strand, within BACOVA_00385 at 10.043 kb on + strand at 10.174 kb on + strand at 10.174 kb on + strand at 10.175 kb on - strand at 10.175 kb on - strand at 10.199 kb on - strand at 10.220 kb on - strand at 10.220 kb on - strand at 10.228 kb on + strand at 10.263 kb on - strand at 10.278 kb on + strand at 10.281 kb on + strand at 10.282 kb on - strand at 10.282 kb on - strand at 10.437 kb on + strand, within BACOVA_00386 at 10.437 kb on + strand, within BACOVA_00386 at 10.438 kb on - strand, within BACOVA_00386 at 10.438 kb on - strand, within BACOVA_00386 at 10.438 kb on - strand, within BACOVA_00386 at 10.545 kb on + strand, within BACOVA_00386 at 10.545 kb on + strand, within BACOVA_00386 at 10.561 kb on - strand, within BACOVA_00386 at 10.572 kb on - strand, within BACOVA_00386 at 10.572 kb on - strand, within BACOVA_00386 at 10.572 kb on - strand, within BACOVA_00386 at 10.595 kb on + strand, within BACOVA_00386 at 10.595 kb on + strand, within BACOVA_00386 at 10.595 kb on + strand, within BACOVA_00386 at 10.609 kb on - strand, within BACOVA_00386 at 10.613 kb on + strand, within BACOVA_00386 at 10.614 kb on - strand, within BACOVA_00386 at 10.687 kb on - strand, within BACOVA_00386 at 10.688 kb on + strand, within BACOVA_00386 at 10.688 kb on + strand, within BACOVA_00386 at 10.688 kb on + strand, within BACOVA_00386 at 10.709 kb on - strand, within BACOVA_00386 at 10.722 kb on + strand, within BACOVA_00386 at 10.765 kb on - strand, within BACOVA_00386 at 10.869 kb on - strand, within BACOVA_00386 at 10.869 kb on - strand, within BACOVA_00386 at 10.872 kb on + strand, within BACOVA_00386 at 10.873 kb on - strand, within BACOVA_00386 at 10.873 kb on - strand, within BACOVA_00386 at 10.873 kb on - strand, within BACOVA_00386 at 10.923 kb on + strand, within BACOVA_00386 at 10.929 kb on + strand, within BACOVA_00386 at 10.929 kb on + strand, within BACOVA_00386 at 10.964 kb on + strand, within BACOVA_00386 at 10.964 kb on + strand, within BACOVA_00386 at 10.964 kb on + strand, within BACOVA_00386 at 10.966 kb on + strand, within BACOVA_00386 at 10.966 kb on + strand, within BACOVA_00386 at 10.966 kb on + strand, within BACOVA_00386 at 10.966 kb on + strand, within BACOVA_00386 at 10.966 kb on + strand, within BACOVA_00386 at 11.013 kb on - strand, within BACOVA_00386 at 11.022 kb on + strand, within BACOVA_00386 at 11.036 kb on + strand, within BACOVA_00386 at 11.036 kb on + strand, within BACOVA_00386 at 11.037 kb on - strand, within BACOVA_00386 at 11.136 kb on + strand, within BACOVA_00386 at 11.169 kb on - strand, within BACOVA_00386 at 11.169 kb on - strand, within BACOVA_00386 at 11.194 kb on - strand, within BACOVA_00386 at 11.348 kb on + strand, within BACOVA_00386 at 11.367 kb on - strand, within BACOVA_00386 at 11.373 kb on + strand, within BACOVA_00386 at 11.374 kb on - strand, within BACOVA_00386 at 11.378 kb on + strand, within BACOVA_00386 at 11.386 kb on - strand, within BACOVA_00386 at 11.410 kb on + strand, within BACOVA_00386 at 11.410 kb on + strand, within BACOVA_00386 at 11.411 kb on - strand, within BACOVA_00386 at 11.475 kb on + strand, within BACOVA_00386 at 11.476 kb on - strand, within BACOVA_00386 at 11.495 kb on - strand, within BACOVA_00386 at 11.514 kb on + strand, within BACOVA_00386 at 11.515 kb on - strand, within BACOVA_00386 at 11.515 kb on - strand, within BACOVA_00386 at 11.533 kb on - strand, within BACOVA_00386 at 11.533 kb on - strand, within BACOVA_00386 at 11.543 kb on + strand, within BACOVA_00386 at 11.574 kb on + strand, within BACOVA_00386 at 11.608 kb on - strand, within BACOVA_00386 at 11.619 kb on - strand, within BACOVA_00386 at 11.619 kb on - strand, within BACOVA_00386 at 11.649 kb on - strand, within BACOVA_00386 at 11.653 kb on - strand, within BACOVA_00386 at 11.653 kb on - strand, within BACOVA_00386 at 11.744 kb on - strand, within BACOVA_00386 at 11.748 kb on + strand, within BACOVA_00386 at 11.749 kb on - strand, within BACOVA_00386 at 11.749 kb on - strand, within BACOVA_00386 at 11.752 kb on + strand, within BACOVA_00386 at 11.752 kb on + strand, within BACOVA_00386 at 11.753 kb on - strand, within BACOVA_00386 at 11.764 kb on + strand, within BACOVA_00386 at 11.765 kb on - strand, within BACOVA_00386 at 11.888 kb on - strand, within BACOVA_00386 at 11.888 kb on - strand, within BACOVA_00386 at 11.890 kb on - strand, within BACOVA_00386 at 11.964 kb on + strand, within BACOVA_00386 at 11.973 kb on + strand, within BACOVA_00386 at 12.044 kb on + strand, within BACOVA_00386 at 12.060 kb on + strand, within BACOVA_00386 at 12.063 kb on + strand, within BACOVA_00386 at 12.063 kb on + strand, within BACOVA_00386 at 12.063 kb on + strand, within BACOVA_00386 at 12.064 kb on - strand, within BACOVA_00386 at 12.138 kb on + strand at 12.154 kb on + strand at 12.160 kb on + strand at 12.171 kb on + strand at 12.194 kb on + strand at 12.194 kb on + strand at 12.195 kb on - strand at 12.197 kb on - strand at 12.241 kb on + strand at 12.242 kb on - strand at 12.279 kb on + strand at 12.328 kb on + strand at 12.329 kb on - strand at 12.332 kb on + strand at 12.333 kb on - strand at 12.333 kb on - strand at 12.352 kb on + strand at 12.352 kb on + strand at 12.376 kb on - strand at 12.385 kb on + strand at 12.385 kb on + strand at 12.426 kb on + strand at 12.429 kb on - strand at 12.429 kb on - strand at 12.431 kb on + strand at 12.478 kb on + strand at 12.478 kb on + strand at 12.479 kb on - strand at 12.486 kb on + strand at 12.486 kb on + strand at 12.487 kb on - strand at 12.487 kb on - strand at 12.506 kb on - strand at 12.506 kb on - strand at 12.508 kb on + strand at 12.708 kb on + strand, within BACOVA_00388 at 12.804 kb on + strand, within BACOVA_00388 at 12.805 kb on - strand, within BACOVA_00388 at 12.805 kb on - strand, within BACOVA_00388 at 12.805 kb on - strand, within BACOVA_00388 at 12.805 kb on - strand, within BACOVA_00388 at 12.806 kb on + strand, within BACOVA_00388 at 12.856 kb on - strand, within BACOVA_00388 at 12.856 kb on - strand, within BACOVA_00388 at 12.859 kb on + strand, within BACOVA_00388 at 12.859 kb on + strand, within BACOVA_00388 at 12.860 kb on - strand, within BACOVA_00388 at 12.863 kb on - strand, within BACOVA_00388 at 13.011 kb on - strand, within BACOVA_00388 at 13.039 kb on + strand, within BACOVA_00388 at 13.077 kb on + strand, within BACOVA_00388 at 13.103 kb on + strand, within BACOVA_00388 at 13.193 kb on + strand, within BACOVA_00388 at 13.204 kb on + strand, within BACOVA_00388 at 13.246 kb on - strand, within BACOVA_00388 at 13.342 kb on + strand, within BACOVA_00388
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 9,264 + BACOVA_00385 0.57 -2.9 9,349 - BACOVA_00385 0.61 -1.1 9,349 - BACOVA_00385 0.61 +0.2 9,350 + BACOVA_00385 0.61 -1.3 9,459 + BACOVA_00385 0.66 -0.6 9,464 + BACOVA_00385 0.66 -0.9 9,465 - BACOVA_00385 0.66 -0.8 9,499 - BACOVA_00385 0.68 -0.1 9,565 - BACOVA_00385 0.71 +0.1 9,608 + BACOVA_00385 0.73 +0.1 9,608 + BACOVA_00385 0.73 +0.6 9,608 + BACOVA_00385 0.73 -0.6 9,683 - BACOVA_00385 0.76 -0.2 9,683 - BACOVA_00385 0.76 -0.7 9,691 - BACOVA_00385 0.77 -0.1 9,719 - BACOVA_00385 0.78 +0.9 9,747 - BACOVA_00385 0.79 +2.8 9,794 + BACOVA_00385 0.82 +0.0 9,847 - BACOVA_00385 0.84 +0.5 9,847 - BACOVA_00385 0.84 -1.1 9,904 + BACOVA_00385 0.87 -0.6 9,909 + BACOVA_00385 0.87 -1.5 9,910 - BACOVA_00385 0.87 -0.8 9,913 - BACOVA_00385 0.87 +0.2 9,975 + BACOVA_00385 0.90 +1.4 10,043 + -0.7 10,174 + +0.2 10,174 + -1.0 10,175 - -1.0 10,175 - +0.3 10,199 - -0.3 10,220 - -2.7 10,220 - -1.3 10,228 + -1.1 10,263 - -1.9 10,278 + +0.1 10,281 + -0.0 10,282 - +0.8 10,282 - -0.2 10,437 + BACOVA_00386 0.11 -0.0 10,437 + BACOVA_00386 0.11 +0.1 10,438 - BACOVA_00386 0.11 -0.1 10,438 - BACOVA_00386 0.11 -1.0 10,438 - BACOVA_00386 0.11 +1.0 10,545 + BACOVA_00386 0.16 -1.0 10,545 + BACOVA_00386 0.16 -0.8 10,561 - BACOVA_00386 0.17 -0.3 10,572 - BACOVA_00386 0.18 -0.3 10,572 - BACOVA_00386 0.18 -0.9 10,572 - BACOVA_00386 0.18 +0.2 10,595 + BACOVA_00386 0.19 -1.6 10,595 + BACOVA_00386 0.19 +0.2 10,595 + BACOVA_00386 0.19 -0.2 10,609 - BACOVA_00386 0.19 +2.2 10,613 + BACOVA_00386 0.19 -0.0 10,614 - BACOVA_00386 0.20 -2.1 10,687 - BACOVA_00386 0.23 -0.9 10,688 + BACOVA_00386 0.23 -1.0 10,688 + BACOVA_00386 0.23 -0.8 10,688 + BACOVA_00386 0.23 -0.3 10,709 - BACOVA_00386 0.24 -0.6 10,722 + BACOVA_00386 0.25 -1.7 10,765 - BACOVA_00386 0.27 -1.3 10,869 - BACOVA_00386 0.31 -0.8 10,869 - BACOVA_00386 0.31 -1.2 10,872 + BACOVA_00386 0.31 +0.1 10,873 - BACOVA_00386 0.32 -0.6 10,873 - BACOVA_00386 0.32 +0.2 10,873 - BACOVA_00386 0.32 +1.9 10,923 + BACOVA_00386 0.34 -0.0 10,929 + BACOVA_00386 0.34 +0.8 10,929 + BACOVA_00386 0.34 +0.4 10,964 + BACOVA_00386 0.36 +0.2 10,964 + BACOVA_00386 0.36 -0.6 10,964 + BACOVA_00386 0.36 -0.4 10,966 + BACOVA_00386 0.36 -0.7 10,966 + BACOVA_00386 0.36 -0.8 10,966 + BACOVA_00386 0.36 -0.9 10,966 + BACOVA_00386 0.36 -0.4 10,966 + BACOVA_00386 0.36 -1.5 11,013 - BACOVA_00386 0.38 -0.7 11,022 + BACOVA_00386 0.38 -1.5 11,036 + BACOVA_00386 0.39 -0.1 11,036 + BACOVA_00386 0.39 -0.5 11,037 - BACOVA_00386 0.39 -1.3 11,136 + BACOVA_00386 0.44 -0.6 11,169 - BACOVA_00386 0.45 +0.7 11,169 - BACOVA_00386 0.45 -2.0 11,194 - BACOVA_00386 0.46 +0.9 11,348 + BACOVA_00386 0.54 -1.9 11,367 - BACOVA_00386 0.54 -1.5 11,373 + BACOVA_00386 0.55 +0.1 11,374 - BACOVA_00386 0.55 +0.7 11,378 + BACOVA_00386 0.55 +0.7 11,386 - BACOVA_00386 0.55 +0.8 11,410 + BACOVA_00386 0.56 +0.4 11,410 + BACOVA_00386 0.56 +0.0 11,411 - BACOVA_00386 0.56 -1.1 11,475 + BACOVA_00386 0.59 -1.1 11,476 - BACOVA_00386 0.59 -0.4 11,495 - BACOVA_00386 0.60 +1.2 11,514 + BACOVA_00386 0.61 +1.4 11,515 - BACOVA_00386 0.61 -1.3 11,515 - BACOVA_00386 0.61 +0.6 11,533 - BACOVA_00386 0.62 +0.6 11,533 - BACOVA_00386 0.62 -0.0 11,543 + BACOVA_00386 0.63 -1.3 11,574 + BACOVA_00386 0.64 -1.0 11,608 - BACOVA_00386 0.66 -1.1 11,619 - BACOVA_00386 0.66 +0.1 11,619 - BACOVA_00386 0.66 -2.7 11,649 - BACOVA_00386 0.67 -1.3 11,653 - BACOVA_00386 0.68 -0.2 11,653 - BACOVA_00386 0.68 -0.7 11,744 - BACOVA_00386 0.72 -1.1 11,748 + BACOVA_00386 0.72 +0.9 11,749 - BACOVA_00386 0.72 -0.0 11,749 - BACOVA_00386 0.72 -0.8 11,752 + BACOVA_00386 0.72 -1.4 11,752 + BACOVA_00386 0.72 +0.6 11,753 - BACOVA_00386 0.72 -0.3 11,764 + BACOVA_00386 0.73 +1.2 11,765 - BACOVA_00386 0.73 +0.7 11,888 - BACOVA_00386 0.79 -1.1 11,888 - BACOVA_00386 0.79 -1.2 11,890 - BACOVA_00386 0.79 +1.2 11,964 + BACOVA_00386 0.82 -1.2 11,973 + BACOVA_00386 0.82 -0.7 12,044 + BACOVA_00386 0.86 -0.8 12,060 + BACOVA_00386 0.86 -0.5 12,063 + BACOVA_00386 0.87 -1.7 12,063 + BACOVA_00386 0.87 +1.0 12,063 + BACOVA_00386 0.87 +0.2 12,064 - BACOVA_00386 0.87 -0.1 12,138 + -1.7 12,154 + -1.1 12,160 + -2.1 12,171 + -1.1 12,194 + +1.2 12,194 + -0.3 12,195 - -0.2 12,197 - -1.2 12,241 + +0.4 12,242 - -0.6 12,279 + -1.0 12,328 + +1.6 12,329 - -1.5 12,332 + -0.4 12,333 - -0.5 12,333 - +0.4 12,352 + +0.7 12,352 + -0.3 12,376 - +0.4 12,385 + -2.1 12,385 + +0.1 12,426 + -1.5 12,429 - -0.4 12,429 - +0.5 12,431 + -0.2 12,478 + +0.2 12,478 + +0.0 12,479 - -2.6 12,486 + -0.0 12,486 + -1.8 12,487 - +0.1 12,487 - -0.4 12,506 - -1.4 12,506 - -1.3 12,508 + -0.6 12,708 + BACOVA_00388 0.26 -0.8 12,804 + BACOVA_00388 0.34 -0.6 12,805 - BACOVA_00388 0.34 -1.8 12,805 - BACOVA_00388 0.34 -1.2 12,805 - BACOVA_00388 0.34 -0.4 12,805 - BACOVA_00388 0.34 -1.1 12,806 + BACOVA_00388 0.34 -0.1 12,856 - BACOVA_00388 0.38 -0.1 12,856 - BACOVA_00388 0.38 +0.2 12,859 + BACOVA_00388 0.38 -1.0 12,859 + BACOVA_00388 0.38 +2.6 12,860 - BACOVA_00388 0.38 +0.5 12,863 - BACOVA_00388 0.38 +0.3 13,011 - BACOVA_00388 0.50 +0.1 13,039 + BACOVA_00388 0.53 -0.4 13,077 + BACOVA_00388 0.56 +0.8 13,103 + BACOVA_00388 0.58 -1.4 13,193 + BACOVA_00388 0.65 -2.4 13,204 + BACOVA_00388 0.66 -2.7 13,246 - BACOVA_00388 0.69 +2.3 13,342 + BACOVA_00388 0.77 -1.0
Or see this region's nucleotide sequence