Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00253 and BACOVA_00254 are separated by 9 nucleotides BACOVA_00254 and BACOVA_00255 are separated by 394 nucleotides BACOVA_00255 and BACOVA_00256 are separated by 145 nucleotides
BACOVA_00253: BACOVA_00253 - hypothetical protein, at 36,222 to 36,485
_00253
BACOVA_00254: BACOVA_00254 - hypothetical protein, at 36,495 to 36,836
_00254
BACOVA_00255: BACOVA_00255 - transposase, IS4 family, at 37,231 to 38,133
_00255
BACOVA_00256: BACOVA_00256 - hypothetical protein, at 38,279 to 40,264
_00256
Position (kb) 37
38
39 Strain fitness (log2 ratio) -2
-1
0
1
2 at 36.241 kb on - strand at 36.245 kb on + strand at 36.246 kb on - strand at 36.249 kb on - strand, within BACOVA_00253 at 36.251 kb on + strand, within BACOVA_00253 at 36.251 kb on + strand, within BACOVA_00253 at 36.251 kb on + strand, within BACOVA_00253 at 36.251 kb on + strand, within BACOVA_00253 at 36.252 kb on - strand, within BACOVA_00253 at 36.252 kb on - strand, within BACOVA_00253 at 36.252 kb on - strand, within BACOVA_00253 at 36.280 kb on - strand, within BACOVA_00253 at 36.281 kb on + strand, within BACOVA_00253 at 36.352 kb on + strand, within BACOVA_00253 at 36.352 kb on + strand, within BACOVA_00253 at 36.452 kb on + strand, within BACOVA_00253 at 36.453 kb on - strand, within BACOVA_00253 at 36.466 kb on + strand at 36.466 kb on + strand at 36.467 kb on - strand at 36.483 kb on + strand at 36.494 kb on - strand at 36.564 kb on - strand, within BACOVA_00254 at 36.571 kb on + strand, within BACOVA_00254 at 36.575 kb on + strand, within BACOVA_00254 at 36.576 kb on - strand, within BACOVA_00254 at 36.576 kb on - strand, within BACOVA_00254 at 36.576 kb on - strand, within BACOVA_00254 at 36.589 kb on + strand, within BACOVA_00254 at 36.590 kb on - strand, within BACOVA_00254 at 36.605 kb on + strand, within BACOVA_00254 at 36.606 kb on - strand, within BACOVA_00254 at 36.606 kb on - strand, within BACOVA_00254 at 36.608 kb on + strand, within BACOVA_00254 at 36.628 kb on + strand, within BACOVA_00254 at 36.629 kb on - strand, within BACOVA_00254 at 36.629 kb on - strand, within BACOVA_00254 at 36.657 kb on - strand, within BACOVA_00254 at 36.671 kb on + strand, within BACOVA_00254 at 36.689 kb on + strand, within BACOVA_00254 at 36.689 kb on + strand, within BACOVA_00254 at 36.690 kb on - strand, within BACOVA_00254 at 36.692 kb on + strand, within BACOVA_00254 at 36.693 kb on - strand, within BACOVA_00254 at 36.698 kb on - strand, within BACOVA_00254 at 36.698 kb on - strand, within BACOVA_00254 at 36.725 kb on + strand, within BACOVA_00254 at 36.726 kb on - strand, within BACOVA_00254 at 36.726 kb on - strand, within BACOVA_00254 at 36.790 kb on + strand, within BACOVA_00254 at 36.802 kb on - strand at 36.805 kb on + strand at 36.806 kb on - strand at 36.815 kb on - strand at 36.820 kb on - strand at 36.820 kb on - strand at 36.855 kb on - strand at 36.858 kb on + strand at 36.865 kb on + strand at 36.880 kb on + strand at 36.893 kb on + strand at 36.904 kb on - strand at 36.915 kb on + strand at 36.915 kb on + strand at 36.918 kb on - strand at 36.918 kb on - strand at 36.925 kb on + strand at 37.057 kb on - strand at 37.078 kb on + strand at 37.098 kb on + strand at 37.098 kb on + strand at 37.098 kb on + strand at 37.099 kb on - strand at 37.104 kb on + strand at 37.145 kb on + strand at 37.146 kb on - strand at 37.153 kb on + strand at 37.154 kb on - strand at 37.165 kb on + strand at 37.166 kb on - strand at 37.166 kb on - strand at 37.232 kb on + strand at 37.249 kb on + strand at 37.249 kb on + strand at 37.250 kb on - strand at 37.294 kb on + strand at 37.294 kb on + strand at 37.295 kb on - strand at 37.295 kb on - strand at 37.295 kb on - strand at 37.297 kb on - strand at 37.297 kb on - strand at 37.363 kb on - strand, within BACOVA_00255 at 37.379 kb on + strand, within BACOVA_00255 at 37.380 kb on - strand, within BACOVA_00255 at 37.434 kb on + strand, within BACOVA_00255 at 37.435 kb on - strand, within BACOVA_00255 at 37.443 kb on + strand, within BACOVA_00255 at 37.443 kb on + strand, within BACOVA_00255 at 37.499 kb on + strand, within BACOVA_00255 at 37.500 kb on - strand, within BACOVA_00255 at 37.522 kb on - strand, within BACOVA_00255 at 37.523 kb on + strand, within BACOVA_00255 at 37.523 kb on + strand, within BACOVA_00255 at 37.524 kb on - strand, within BACOVA_00255 at 37.524 kb on - strand, within BACOVA_00255 at 37.542 kb on + strand, within BACOVA_00255 at 37.543 kb on - strand, within BACOVA_00255 at 37.543 kb on - strand, within BACOVA_00255 at 37.543 kb on - strand, within BACOVA_00255 at 37.543 kb on - strand, within BACOVA_00255 at 37.544 kb on + strand, within BACOVA_00255 at 37.613 kb on - strand, within BACOVA_00255 at 37.664 kb on + strand, within BACOVA_00255 at 37.664 kb on + strand, within BACOVA_00255 at 37.664 kb on + strand, within BACOVA_00255 at 37.665 kb on - strand, within BACOVA_00255 at 37.665 kb on - strand, within BACOVA_00255 at 37.666 kb on + strand, within BACOVA_00255 at 37.667 kb on - strand, within BACOVA_00255 at 37.667 kb on - strand, within BACOVA_00255 at 37.667 kb on - strand, within BACOVA_00255 at 37.672 kb on - strand, within BACOVA_00255 at 37.672 kb on - strand, within BACOVA_00255 at 37.672 kb on - strand, within BACOVA_00255 at 37.767 kb on + strand, within BACOVA_00255 at 37.833 kb on - strand, within BACOVA_00255 at 37.846 kb on - strand, within BACOVA_00255 at 37.850 kb on + strand, within BACOVA_00255 at 37.850 kb on + strand, within BACOVA_00255 at 37.857 kb on + strand, within BACOVA_00255 at 37.857 kb on + strand, within BACOVA_00255 at 38.033 kb on + strand, within BACOVA_00255 at 38.057 kb on - strand at 38.057 kb on - strand at 38.063 kb on + strand at 38.080 kb on - strand at 38.096 kb on - strand at 38.096 kb on - strand at 38.111 kb on + strand at 38.115 kb on + strand at 38.192 kb on + strand at 38.197 kb on - strand at 38.254 kb on - strand at 38.254 kb on - strand at 38.261 kb on + strand at 38.261 kb on + strand at 38.270 kb on + strand at 38.271 kb on - strand at 38.271 kb on - strand at 38.278 kb on - strand at 38.305 kb on - strand at 38.348 kb on - strand at 38.404 kb on + strand at 38.405 kb on - strand at 38.405 kb on - strand at 38.405 kb on - strand at 38.406 kb on + strand at 38.408 kb on + strand at 38.408 kb on + strand at 38.408 kb on + strand at 38.409 kb on - strand at 38.409 kb on - strand at 38.410 kb on + strand at 38.410 kb on + strand at 38.410 kb on + strand at 38.410 kb on + strand at 38.410 kb on + strand at 38.410 kb on + strand at 38.411 kb on - strand at 38.415 kb on + strand at 38.416 kb on - strand at 38.418 kb on - strand at 38.465 kb on - strand at 38.527 kb on - strand, within BACOVA_00256 at 38.537 kb on + strand, within BACOVA_00256 at 38.603 kb on + strand, within BACOVA_00256 at 38.674 kb on + strand, within BACOVA_00256 at 38.706 kb on - strand, within BACOVA_00256 at 38.838 kb on - strand, within BACOVA_00256 at 38.852 kb on - strand, within BACOVA_00256 at 38.894 kb on + strand, within BACOVA_00256 at 38.970 kb on - strand, within BACOVA_00256 at 39.008 kb on + strand, within BACOVA_00256
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 36,241 - -0.7 36,245 + -0.7 36,246 - +0.3 36,249 - BACOVA_00253 0.10 -0.1 36,251 + BACOVA_00253 0.11 -0.2 36,251 + BACOVA_00253 0.11 +0.5 36,251 + BACOVA_00253 0.11 +0.1 36,251 + BACOVA_00253 0.11 -1.0 36,252 - BACOVA_00253 0.11 +0.1 36,252 - BACOVA_00253 0.11 -1.1 36,252 - BACOVA_00253 0.11 +0.4 36,280 - BACOVA_00253 0.22 +0.2 36,281 + BACOVA_00253 0.22 -0.1 36,352 + BACOVA_00253 0.49 -1.7 36,352 + BACOVA_00253 0.49 +1.2 36,452 + BACOVA_00253 0.87 -0.7 36,453 - BACOVA_00253 0.88 -1.9 36,466 + +1.2 36,466 + +0.1 36,467 - -0.2 36,483 + -1.2 36,494 - -0.8 36,564 - BACOVA_00254 0.20 +0.5 36,571 + BACOVA_00254 0.22 -0.1 36,575 + BACOVA_00254 0.23 -2.6 36,576 - BACOVA_00254 0.24 +0.4 36,576 - BACOVA_00254 0.24 +1.0 36,576 - BACOVA_00254 0.24 -0.2 36,589 + BACOVA_00254 0.27 -1.2 36,590 - BACOVA_00254 0.28 +0.2 36,605 + BACOVA_00254 0.32 -2.4 36,606 - BACOVA_00254 0.32 -1.7 36,606 - BACOVA_00254 0.32 +0.7 36,608 + BACOVA_00254 0.33 -1.6 36,628 + BACOVA_00254 0.39 -0.5 36,629 - BACOVA_00254 0.39 -1.0 36,629 - BACOVA_00254 0.39 -0.9 36,657 - BACOVA_00254 0.47 +0.1 36,671 + BACOVA_00254 0.51 -0.0 36,689 + BACOVA_00254 0.57 -0.4 36,689 + BACOVA_00254 0.57 -0.4 36,690 - BACOVA_00254 0.57 -1.1 36,692 + BACOVA_00254 0.58 +0.5 36,693 - BACOVA_00254 0.58 +0.3 36,698 - BACOVA_00254 0.59 -0.5 36,698 - BACOVA_00254 0.59 -1.3 36,725 + BACOVA_00254 0.67 +1.4 36,726 - BACOVA_00254 0.68 -0.9 36,726 - BACOVA_00254 0.68 -1.2 36,790 + BACOVA_00254 0.86 +0.7 36,802 - +0.1 36,805 + +0.3 36,806 - -0.4 36,815 - +0.8 36,820 - +0.1 36,820 - -1.0 36,855 - +0.7 36,858 + +0.7 36,865 + +0.7 36,880 + -0.9 36,893 + -0.5 36,904 - -1.6 36,915 + -0.8 36,915 + -1.8 36,918 - -0.5 36,918 - +0.5 36,925 + -1.2 37,057 - +0.6 37,078 + +0.2 37,098 + +0.1 37,098 + -1.5 37,098 + +1.4 37,099 - -1.3 37,104 + +0.4 37,145 + -0.8 37,146 - -0.4 37,153 + -0.5 37,154 - -1.4 37,165 + -1.1 37,166 - -0.5 37,166 - -0.4 37,232 + -0.4 37,249 + +0.2 37,249 + -1.4 37,250 - -2.1 37,294 + +0.9 37,294 + -0.7 37,295 - -0.9 37,295 - -1.4 37,295 - +1.6 37,297 - -0.6 37,297 - -0.5 37,363 - BACOVA_00255 0.15 -0.0 37,379 + BACOVA_00255 0.16 +1.4 37,380 - BACOVA_00255 0.17 -0.7 37,434 + BACOVA_00255 0.22 -0.6 37,435 - BACOVA_00255 0.23 -1.6 37,443 + BACOVA_00255 0.23 -1.5 37,443 + BACOVA_00255 0.23 -1.6 37,499 + BACOVA_00255 0.30 +1.6 37,500 - BACOVA_00255 0.30 +0.8 37,522 - BACOVA_00255 0.32 +0.1 37,523 + BACOVA_00255 0.32 -1.2 37,523 + BACOVA_00255 0.32 +0.6 37,524 - BACOVA_00255 0.32 +0.3 37,524 - BACOVA_00255 0.32 -0.7 37,542 + BACOVA_00255 0.34 -0.3 37,543 - BACOVA_00255 0.35 -1.3 37,543 - BACOVA_00255 0.35 +0.1 37,543 - BACOVA_00255 0.35 -0.8 37,543 - BACOVA_00255 0.35 +0.1 37,544 + BACOVA_00255 0.35 +0.5 37,613 - BACOVA_00255 0.42 -0.3 37,664 + BACOVA_00255 0.48 +0.1 37,664 + BACOVA_00255 0.48 +0.0 37,664 + BACOVA_00255 0.48 -0.2 37,665 - BACOVA_00255 0.48 -1.1 37,665 - BACOVA_00255 0.48 +0.3 37,666 + BACOVA_00255 0.48 +0.4 37,667 - BACOVA_00255 0.48 +0.6 37,667 - BACOVA_00255 0.48 -1.5 37,667 - BACOVA_00255 0.48 -0.4 37,672 - BACOVA_00255 0.49 +0.3 37,672 - BACOVA_00255 0.49 -0.7 37,672 - BACOVA_00255 0.49 +0.1 37,767 + BACOVA_00255 0.59 -0.7 37,833 - BACOVA_00255 0.67 -0.9 37,846 - BACOVA_00255 0.68 +0.6 37,850 + BACOVA_00255 0.69 -0.1 37,850 + BACOVA_00255 0.69 -0.2 37,857 + BACOVA_00255 0.69 -1.5 37,857 + BACOVA_00255 0.69 -0.1 38,033 + BACOVA_00255 0.89 -0.6 38,057 - -0.6 38,057 - -1.1 38,063 + -0.4 38,080 - -1.8 38,096 - -1.5 38,096 - -1.0 38,111 + +0.1 38,115 + -0.4 38,192 + +0.4 38,197 - -0.8 38,254 - +0.6 38,254 - +0.8 38,261 + -0.4 38,261 + -0.5 38,270 + -1.5 38,271 - -0.1 38,271 - -0.9 38,278 - +1.3 38,305 - +0.5 38,348 - -1.4 38,404 + -0.1 38,405 - -1.0 38,405 - -1.2 38,405 - -0.8 38,406 + +1.8 38,408 + +0.3 38,408 + +0.8 38,408 + +0.7 38,409 - +2.0 38,409 - -1.9 38,410 + -1.1 38,410 + -0.3 38,410 + -1.6 38,410 + -0.1 38,410 + +0.3 38,410 + -0.5 38,411 - +0.1 38,415 + +0.3 38,416 - +1.6 38,418 - -0.8 38,465 - -0.7 38,527 - BACOVA_00256 0.12 +0.1 38,537 + BACOVA_00256 0.13 +1.3 38,603 + BACOVA_00256 0.16 -0.4 38,674 + BACOVA_00256 0.20 +1.1 38,706 - BACOVA_00256 0.22 +0.7 38,838 - BACOVA_00256 0.28 +0.6 38,852 - BACOVA_00256 0.29 -0.4 38,894 + BACOVA_00256 0.31 +1.5 38,970 - BACOVA_00256 0.35 -2.7 39,008 + BACOVA_00256 0.37 -0.0
Or see this region's nucleotide sequence