Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00088 and BACOVA_00089 overlap by 1 nucleotides BACOVA_00089 and BACOVA_00090 overlap by 4 nucleotides BACOVA_00090 and BACOVA_00091 are separated by 78 nucleotides BACOVA_00091 and BACOVA_00092 overlap by 24 nucleotides
BACOVA_00088: BACOVA_00088 - HipA-like C-terminal domain protein, at 2,399 to 3,337
_00088
BACOVA_00089: BACOVA_00089 - HipA domain protein, at 3,337 to 3,663
_00089
BACOVA_00090: BACOVA_00090 - transcriptional regulator, y4mF family, at 3,660 to 3,878
_00090
BACOVA_00091: BACOVA_00091 - hypothetical protein, at 3,957 to 4,064
_00091
BACOVA_00092: BACOVA_00092 - catalase, at 4,041 to 5,501
_00092
Position (kb)
3
4
5 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3.076 kb on + strand, within BACOVA_00088 at 3.078 kb on + strand, within BACOVA_00088 at 3.078 kb on + strand, within BACOVA_00088 at 3.079 kb on - strand, within BACOVA_00088 at 3.079 kb on - strand, within BACOVA_00088 at 3.100 kb on + strand, within BACOVA_00088 at 3.134 kb on + strand, within BACOVA_00088 at 3.135 kb on - strand, within BACOVA_00088 at 3.135 kb on - strand, within BACOVA_00088 at 3.166 kb on + strand, within BACOVA_00088 at 3.209 kb on - strand, within BACOVA_00088 at 3.223 kb on + strand, within BACOVA_00088 at 3.224 kb on - strand, within BACOVA_00088 at 3.230 kb on + strand, within BACOVA_00088 at 3.231 kb on - strand, within BACOVA_00088 at 3.258 kb on - strand at 3.318 kb on + strand at 3.320 kb on + strand at 3.320 kb on + strand at 3.339 kb on - strand at 3.349 kb on + strand at 3.366 kb on + strand at 3.412 kb on - strand, within BACOVA_00089 at 3.451 kb on - strand, within BACOVA_00089 at 3.474 kb on + strand, within BACOVA_00089 at 3.474 kb on + strand, within BACOVA_00089 at 3.474 kb on + strand, within BACOVA_00089 at 3.475 kb on - strand, within BACOVA_00089 at 3.499 kb on + strand, within BACOVA_00089 at 3.500 kb on - strand, within BACOVA_00089 at 3.502 kb on + strand, within BACOVA_00089 at 3.510 kb on + strand, within BACOVA_00089 at 3.510 kb on + strand, within BACOVA_00089 at 3.510 kb on + strand, within BACOVA_00089 at 3.511 kb on - strand, within BACOVA_00089 at 3.511 kb on - strand, within BACOVA_00089 at 3.512 kb on + strand, within BACOVA_00089 at 3.513 kb on - strand, within BACOVA_00089 at 3.546 kb on + strand, within BACOVA_00089 at 3.547 kb on - strand, within BACOVA_00089 at 3.572 kb on + strand, within BACOVA_00089 at 3.597 kb on - strand, within BACOVA_00089 at 3.644 kb on + strand at 3.644 kb on + strand at 3.647 kb on - strand at 3.664 kb on - strand at 3.664 kb on - strand at 3.687 kb on + strand, within BACOVA_00090 at 3.978 kb on - strand, within BACOVA_00091 at 4.015 kb on + strand, within BACOVA_00091 at 4.015 kb on + strand, within BACOVA_00091 at 4.016 kb on - strand, within BACOVA_00091 at 4.062 kb on + strand at 4.063 kb on - strand at 4.063 kb on - strand at 4.100 kb on - strand at 4.117 kb on + strand at 4.191 kb on + strand, within BACOVA_00092 at 4.192 kb on - strand, within BACOVA_00092 at 4.192 kb on - strand, within BACOVA_00092 at 4.224 kb on + strand, within BACOVA_00092 at 4.225 kb on - strand, within BACOVA_00092 at 4.242 kb on - strand, within BACOVA_00092 at 4.244 kb on - strand, within BACOVA_00092 at 4.246 kb on + strand, within BACOVA_00092 at 4.247 kb on - strand, within BACOVA_00092 at 4.247 kb on - strand, within BACOVA_00092 at 4.274 kb on - strand, within BACOVA_00092 at 4.274 kb on - strand, within BACOVA_00092 at 4.280 kb on - strand, within BACOVA_00092 at 4.280 kb on - strand, within BACOVA_00092 at 4.280 kb on - strand, within BACOVA_00092 at 4.280 kb on - strand, within BACOVA_00092 at 4.376 kb on - strand, within BACOVA_00092 at 4.493 kb on - strand, within BACOVA_00092 at 4.500 kb on + strand, within BACOVA_00092 at 4.500 kb on + strand, within BACOVA_00092 at 4.546 kb on - strand, within BACOVA_00092 at 4.546 kb on - strand, within BACOVA_00092 at 4.664 kb on + strand, within BACOVA_00092 at 4.664 kb on + strand, within BACOVA_00092 at 4.853 kb on + strand, within BACOVA_00092 at 4.854 kb on - strand, within BACOVA_00092 at 4.877 kb on + strand, within BACOVA_00092 at 4.878 kb on - strand, within BACOVA_00092 at 4.878 kb on - strand, within BACOVA_00092 at 4.878 kb on - strand, within BACOVA_00092 at 4.898 kb on + strand, within BACOVA_00092 at 4.905 kb on - strand, within BACOVA_00092 at 4.906 kb on + strand, within BACOVA_00092 at 4.906 kb on + strand, within BACOVA_00092 at 4.940 kb on - strand, within BACOVA_00092 at 4.953 kb on - strand, within BACOVA_00092 at 4.974 kb on - strand, within BACOVA_00092 at 4.976 kb on + strand, within BACOVA_00092 at 4.986 kb on + strand, within BACOVA_00092 at 4.986 kb on + strand, within BACOVA_00092 at 4.986 kb on + strand, within BACOVA_00092 at 4.987 kb on - strand, within BACOVA_00092 at 5.022 kb on - strand, within BACOVA_00092
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 3,076 + BACOVA_00088 0.72 -0.8 3,078 + BACOVA_00088 0.72 +0.2 3,078 + BACOVA_00088 0.72 -0.2 3,079 - BACOVA_00088 0.72 -1.1 3,079 - BACOVA_00088 0.72 +0.3 3,100 + BACOVA_00088 0.75 +0.0 3,134 + BACOVA_00088 0.78 +1.7 3,135 - BACOVA_00088 0.78 -0.7 3,135 - BACOVA_00088 0.78 -0.2 3,166 + BACOVA_00088 0.82 +1.5 3,209 - BACOVA_00088 0.86 +0.8 3,223 + BACOVA_00088 0.88 -0.9 3,224 - BACOVA_00088 0.88 +0.5 3,230 + BACOVA_00088 0.88 +0.7 3,231 - BACOVA_00088 0.89 -1.5 3,258 - -0.5 3,318 + -0.5 3,320 + +1.1 3,320 + +1.4 3,339 - -0.7 3,349 + -1.0 3,366 + +0.3 3,412 - BACOVA_00089 0.23 +0.5 3,451 - BACOVA_00089 0.35 -0.0 3,474 + BACOVA_00089 0.42 +1.1 3,474 + BACOVA_00089 0.42 +0.1 3,474 + BACOVA_00089 0.42 -0.6 3,475 - BACOVA_00089 0.42 -0.4 3,499 + BACOVA_00089 0.50 -2.3 3,500 - BACOVA_00089 0.50 +1.3 3,502 + BACOVA_00089 0.50 +0.6 3,510 + BACOVA_00089 0.53 +0.4 3,510 + BACOVA_00089 0.53 +0.6 3,510 + BACOVA_00089 0.53 +0.4 3,511 - BACOVA_00089 0.53 -0.5 3,511 - BACOVA_00089 0.53 -0.3 3,512 + BACOVA_00089 0.54 -1.2 3,513 - BACOVA_00089 0.54 +0.8 3,546 + BACOVA_00089 0.64 +0.9 3,547 - BACOVA_00089 0.64 -1.4 3,572 + BACOVA_00089 0.72 -1.4 3,597 - BACOVA_00089 0.80 -0.9 3,644 + +0.5 3,644 + -0.7 3,647 - -0.1 3,664 - -1.7 3,664 - -0.1 3,687 + BACOVA_00090 0.12 -1.1 3,978 - BACOVA_00091 0.19 -1.2 4,015 + BACOVA_00091 0.54 -0.7 4,015 + BACOVA_00091 0.54 -3.0 4,016 - BACOVA_00091 0.55 -2.0 4,062 + +0.4 4,063 - +1.2 4,063 - +0.1 4,100 - -0.3 4,117 + -0.5 4,191 + BACOVA_00092 0.10 -0.1 4,192 - BACOVA_00092 0.10 +0.1 4,192 - BACOVA_00092 0.10 -0.6 4,224 + BACOVA_00092 0.13 -0.1 4,225 - BACOVA_00092 0.13 +1.1 4,242 - BACOVA_00092 0.14 +0.0 4,244 - BACOVA_00092 0.14 -0.4 4,246 + BACOVA_00092 0.14 -1.5 4,247 - BACOVA_00092 0.14 -0.1 4,247 - BACOVA_00092 0.14 +0.8 4,274 - BACOVA_00092 0.16 +1.7 4,274 - BACOVA_00092 0.16 -0.6 4,280 - BACOVA_00092 0.16 -0.4 4,280 - BACOVA_00092 0.16 -0.7 4,280 - BACOVA_00092 0.16 +2.0 4,280 - BACOVA_00092 0.16 +0.5 4,376 - BACOVA_00092 0.23 -0.5 4,493 - BACOVA_00092 0.31 -0.1 4,500 + BACOVA_00092 0.31 +0.7 4,500 + BACOVA_00092 0.31 +0.5 4,546 - BACOVA_00092 0.35 -0.1 4,546 - BACOVA_00092 0.35 -0.9 4,664 + BACOVA_00092 0.43 +0.4 4,664 + BACOVA_00092 0.43 +0.5 4,853 + BACOVA_00092 0.56 -1.0 4,854 - BACOVA_00092 0.56 -0.2 4,877 + BACOVA_00092 0.57 -0.5 4,878 - BACOVA_00092 0.57 +0.5 4,878 - BACOVA_00092 0.57 -0.2 4,878 - BACOVA_00092 0.57 +0.2 4,898 + BACOVA_00092 0.59 +1.3 4,905 - BACOVA_00092 0.59 +0.4 4,906 + BACOVA_00092 0.59 -1.0 4,906 + BACOVA_00092 0.59 +1.5 4,940 - BACOVA_00092 0.62 +0.7 4,953 - BACOVA_00092 0.62 +0.1 4,974 - BACOVA_00092 0.64 -1.3 4,976 + BACOVA_00092 0.64 -0.6 4,986 + BACOVA_00092 0.65 +0.0 4,986 + BACOVA_00092 0.65 -0.3 4,986 + BACOVA_00092 0.65 -0.2 4,987 - BACOVA_00092 0.65 +0.8 5,022 - BACOVA_00092 0.67 +0.6
Or see this region's nucleotide sequence