Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14790

Experiment: R2A_PIPES pH 4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4.5
3,221,916	-		OKGIIK_14780	0.43	-2.4
3,222,092	+		OKGIIK_14780	0.73	-1.9
3,222,092	+		OKGIIK_14780	0.73	+0.3
3,222,092	+		OKGIIK_14780	0.73	-0.3
3,222,093	-		OKGIIK_14780	0.74	-1.1
3,222,093	-		OKGIIK_14780	0.74	+0.9
3,222,107	-		OKGIIK_14780	0.76	+1.1
3,222,148	+		OKGIIK_14780	0.83	+0.6
3,222,149	-		OKGIIK_14780	0.83	+0.4
3,222,784	+		OKGIIK_14785	0.83	+0.2
3,222,784	+		OKGIIK_14785	0.83	+1.1
3,222,784	+		OKGIIK_14785	0.83	+0.0
3,222,784	+		OKGIIK_14785	0.83	-0.5
3,222,784	+		OKGIIK_14785	0.83	-0.1
3,222,784	+		OKGIIK_14785	0.83	+0.1
3,222,784	+		OKGIIK_14785	0.83	-1.4
3,222,785	-		OKGIIK_14785	0.83	-0.4
3,222,785	-		OKGIIK_14785	0.83	-0.9
3,222,785	-		OKGIIK_14785	0.83	-0.9
3,222,785	-		OKGIIK_14785	0.83	+0.6
3,223,102	-		OKGIIK_14790	0.16	-0.0
3,223,116	+		OKGIIK_14790	0.17	-2.3
3,223,119	+		OKGIIK_14790	0.18	+0.6
3,223,119	+		OKGIIK_14790	0.18	-0.2
3,223,119	+		OKGIIK_14790	0.18	-0.9
3,223,119	+		OKGIIK_14790	0.18	-1.9
3,223,119	+		OKGIIK_14790	0.18	+1.3
3,223,120	-		OKGIIK_14790	0.18	-0.1
3,223,120	-		OKGIIK_14790	0.18	-0.4
3,223,170	+		OKGIIK_14790	0.22	-0.2
3,223,218	+		OKGIIK_14790	0.25	-0.4
3,223,218	+		OKGIIK_14790	0.25	+1.3
3,223,218	+		OKGIIK_14790	0.25	-1.6
3,223,219	-		OKGIIK_14790	0.25	+0.1
3,223,219	-		OKGIIK_14790	0.25	-0.6
3,223,220	+		OKGIIK_14790	0.25	-0.4
3,223,223	+		OKGIIK_14790	0.26	-1.2
3,223,223	+		OKGIIK_14790	0.26	+0.5
3,223,223	+		OKGIIK_14790	0.26	+0.1
3,223,223	+		OKGIIK_14790	0.26	+0.1
3,223,223	+		OKGIIK_14790	0.26	-0.4
3,223,223	+		OKGIIK_14790	0.26	+0.9
3,223,223	+		OKGIIK_14790	0.26	+0.1
3,223,223	+		OKGIIK_14790	0.26	-0.2
3,223,223	+		OKGIIK_14790	0.26	+0.6
3,223,223	+		OKGIIK_14790	0.26	+1.1
3,223,223	+		OKGIIK_14790	0.26	+0.5
3,223,223	+		OKGIIK_14790	0.26	-1.4
3,223,223	+		OKGIIK_14790	0.26	-0.9
3,223,223	+		OKGIIK_14790	0.26	-0.7
3,223,224	-		OKGIIK_14790	0.26	-0.1
3,223,224	-		OKGIIK_14790	0.26	+0.3
3,223,224	-		OKGIIK_14790	0.26	-1.1
3,223,224	-		OKGIIK_14790	0.26	+1.4
3,223,224	-		OKGIIK_14790	0.26	+0.1
3,223,224	-		OKGIIK_14790	0.26	+0.4
3,223,224	-		OKGIIK_14790	0.26	-1.4
3,223,224	-		OKGIIK_14790	0.26	+0.4
3,223,320	+		OKGIIK_14790	0.33	+0.6
3,223,320	+		OKGIIK_14790	0.33	+0.3
3,223,320	+		OKGIIK_14790	0.33	+0.9
3,223,320	+		OKGIIK_14790	0.33	+0.7
3,223,320	+		OKGIIK_14790	0.33	-2.9
3,223,321	-		OKGIIK_14790	0.33	+0.3
3,223,321	-		OKGIIK_14790	0.33	+0.2
3,223,321	-		OKGIIK_14790	0.33	+1.7
3,223,321	-		OKGIIK_14790	0.33	+0.2
3,223,329	+		OKGIIK_14790	0.34	-0.4
3,223,330	-		OKGIIK_14790	0.34	-1.6
3,223,330	-		OKGIIK_14790	0.34	-1.0
3,223,330	-		OKGIIK_14790	0.34	+0.1
3,223,330	-		OKGIIK_14790	0.34	+0.0
3,223,359	+		OKGIIK_14790	0.36	-1.0
3,223,359	+		OKGIIK_14790	0.36	-1.1
3,223,359	+		OKGIIK_14790	0.36	-1.7
3,223,359	+		OKGIIK_14790	0.36	+0.6
3,223,360	-		OKGIIK_14790	0.36	+0.9
3,223,360	-		OKGIIK_14790	0.36	-0.9
3,223,360	-		OKGIIK_14790	0.36	-2.4
3,223,360	-		OKGIIK_14790	0.36	+0.8
3,223,371	+		OKGIIK_14790	0.37	-0.9
3,223,371	+		OKGIIK_14790	0.37	+0.6
3,223,371	+		OKGIIK_14790	0.37	-0.3
3,223,371	+		OKGIIK_14790	0.37	+0.6
3,223,371	+		OKGIIK_14790	0.37	-0.9
3,223,371	+		OKGIIK_14790	0.37	-0.1
3,223,371	+		OKGIIK_14790	0.37	+0.6
3,223,372	-		OKGIIK_14790	0.37	+0.6
3,223,372	-		OKGIIK_14790	0.37	+0.9
3,223,372	-		OKGIIK_14790	0.37	+1.7
3,223,372	-		OKGIIK_14790	0.37	-0.5
3,223,372	-		OKGIIK_14790	0.37	-1.9
3,223,372	-		OKGIIK_14790	0.37	-0.1
3,223,651	-		OKGIIK_14790	0.58	-0.2
3,223,651	-		OKGIIK_14790	0.58	-0.6
3,223,943	+		OKGIIK_14790	0.81	+0.1
3,223,943	+		OKGIIK_14790	0.81	-3.0
3,223,989	+		OKGIIK_14790	0.84	+0.8
3,223,989	+		OKGIIK_14790	0.84	+0.0
3,223,989	+		OKGIIK_14790	0.84	-0.4
3,223,989	+		OKGIIK_14790	0.84	-1.6
3,223,989	+		OKGIIK_14790	0.84	+0.3
3,223,989	+		OKGIIK_14790	0.84	+1.4
3,223,989	+		OKGIIK_14790	0.84	+1.1
3,223,989	+		OKGIIK_14790	0.84	-0.4
3,223,989	+		OKGIIK_14790	0.84	-1.4
3,223,989	+		OKGIIK_14790	0.84	-2.0
3,223,989	+		OKGIIK_14790	0.84	-0.8
3,223,990	-		OKGIIK_14790	0.84	+1.7
3,223,990	-		OKGIIK_14790	0.84	-0.1
3,223,990	-		OKGIIK_14790	0.84	-1.4
3,223,990	-		OKGIIK_14790	0.84	-0.7
3,223,990	-		OKGIIK_14790	0.84	-0.4
3,223,990	-		OKGIIK_14790	0.84	-0.4
3,223,990	-		OKGIIK_14790	0.84	-0.9
3,224,101	+				-0.1
3,224,101	+				+0.2
3,224,101	+				-1.7
3,224,101	+				-0.5
3,224,102	-				+1.1
3,224,236	+				-0.9
3,224,266	+				-0.6
3,224,266	+				-0.3
3,224,267	-				-0.3
3,224,581	+		OKGIIK_14795	0.71	-0.2
3,224,582	-		OKGIIK_14795	0.71	-0.4
3,224,582	-		OKGIIK_14795	0.71	-0.4
3,224,582	-		OKGIIK_14795	0.71	-1.3
3,224,582	-		OKGIIK_14795	0.71	+1.4
3,224,582	-		OKGIIK_14795	0.71	+0.1
3,224,838	-		OKGIIK_14800	0.22	-1.2
3,224,882	+		OKGIIK_14800	0.30	-1.4
3,224,882	+		OKGIIK_14800	0.30	-0.1
3,224,882	+		OKGIIK_14800	0.30	-1.6
3,224,882	+		OKGIIK_14800	0.30	-2.7
3,224,882	+		OKGIIK_14800	0.30	+0.0
3,224,883	-		OKGIIK_14800	0.31	-0.1
3,224,883	-		OKGIIK_14800	0.31	-1.4
3,224,883	-		OKGIIK_14800	0.31	-2.9
3,224,883	-		OKGIIK_14800	0.31	+1.1
3,224,883	-		OKGIIK_14800	0.31	+0.3
3,224,883	-		OKGIIK_14800	0.31	-0.7
3,224,984	+		OKGIIK_14800	0.50	-2.9
3,224,984	+		OKGIIK_14800	0.50	-2.4
3,224,984	+		OKGIIK_14800	0.50	+1.0
3,224,984	+		OKGIIK_14800	0.50	-2.3
3,224,984	+		OKGIIK_14800	0.50	-0.2
3,224,984	+		OKGIIK_14800	0.50	-0.9
3,224,984	+		OKGIIK_14800	0.50	+0.3
3,224,985	-		OKGIIK_14800	0.50	+0.4
3,224,985	-		OKGIIK_14800	0.50	-0.4
3,224,985	-		OKGIIK_14800	0.50	-0.1
3,224,985	-		OKGIIK_14800	0.50	-1.0
3,225,039	-		OKGIIK_14800	0.61	-0.3
3,225,047	+		OKGIIK_14800	0.63	+0.5
3,225,047	+		OKGIIK_14800	0.63	+0.1
3,225,047	+		OKGIIK_14800	0.63	+0.7
3,225,047	-		OKGIIK_14800	0.63	-1.2
3,225,048	-		OKGIIK_14800	0.63	+0.9
3,225,048	-		OKGIIK_14800	0.63	-0.5
3,225,048	-		OKGIIK_14800	0.63	-0.7
3,225,119	+		OKGIIK_14800	0.77	+1.0
3,225,119	+		OKGIIK_14800	0.77	-1.2
3,225,119	+		OKGIIK_14800	0.77	-2.3
3,225,120	-		OKGIIK_14800	0.77	-0.9
3,225,120	-		OKGIIK_14800	0.77	+0.1
3,225,120	-		OKGIIK_14800	0.77	+0.1
3,225,120	-		OKGIIK_14800	0.77	+1.1
3,225,120	-		OKGIIK_14800	0.77	+1.7
3,225,120	-		OKGIIK_14800	0.77	-1.4
3,225,120	-		OKGIIK_14800	0.77	-0.1
3,225,120	-		OKGIIK_14800	0.77	+0.6