Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14305

Experiment: R2A_PIPES pH 4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4.5
3,118,015	-		OKGIIK_14300	0.38	-0.9
3,118,015	-		OKGIIK_14300	0.38	+1.3
3,118,015	-		OKGIIK_14300	0.38	+0.3
3,118,015	-		OKGIIK_14300	0.38	+0.7
3,118,015	-		OKGIIK_14300	0.38	+0.2
3,118,015	-		OKGIIK_14300	0.38	+0.7
3,118,015	-		OKGIIK_14300	0.38	+0.7
3,118,015	-		OKGIIK_14300	0.38	-0.2
3,118,015	-		OKGIIK_14300	0.38	+0.4
3,118,015	-		OKGIIK_14300	0.38	+0.8
3,118,015	-		OKGIIK_14300	0.38	+0.0
3,118,015	-		OKGIIK_14300	0.38	+0.3
3,118,015	-		OKGIIK_14300	0.38	-2.2
3,118,015	-		OKGIIK_14300	0.38	+0.1
3,118,017	+		OKGIIK_14300	0.38	-1.4
3,118,018	-		OKGIIK_14300	0.38	+1.0
3,118,018	-		OKGIIK_14300	0.38	-0.5
3,118,018	-		OKGIIK_14300	0.38	+0.7
3,118,018	-		OKGIIK_14300	0.38	-0.8
3,118,251	+		OKGIIK_14300	0.54	-0.9
3,118,332	+		OKGIIK_14300	0.60	+0.7
3,118,333	-		OKGIIK_14300	0.60	-0.3
3,118,333	-		OKGIIK_14300	0.60	+0.5
3,118,880	-				-1.0
3,118,964	+				+0.7
3,118,964	+				-0.4
3,118,965	-				-1.0
3,118,997	+				-0.4
3,118,997	+				-0.7
3,118,997	+				-2.3
3,118,997	+				+1.1
3,118,997	+				+1.5
3,118,997	+				-0.3
3,118,997	+				-2.7
3,118,997	+				+0.4
3,118,997	+				-0.6
3,118,997	+				-1.0
3,118,997	+				-0.3
3,118,997	+				+0.0
3,118,998	-				-0.6
3,118,998	-				-1.2
3,118,998	-				-0.7
3,118,998	-				+0.1
3,118,999	-				-0.3
3,119,083	+		OKGIIK_14305	0.11	-0.4
3,119,083	+		OKGIIK_14305	0.11	-1.3
3,119,084	-		OKGIIK_14305	0.11	+1.3
3,119,084	-		OKGIIK_14305	0.11	+0.7
3,119,084	-		OKGIIK_14305	0.11	-0.9
3,119,167	-		OKGIIK_14305	0.17	-3.2
3,119,276	+		OKGIIK_14305	0.25	-0.7
3,119,276	+		OKGIIK_14305	0.25	-0.4
3,119,348	+		OKGIIK_14305	0.31	-0.4
3,119,348	+		OKGIIK_14305	0.31	+0.4
3,119,348	+		OKGIIK_14305	0.31	-1.3
3,119,348	+		OKGIIK_14305	0.31	+0.1
3,119,349	-		OKGIIK_14305	0.31	-0.9
3,119,349	-		OKGIIK_14305	0.31	+0.1
3,119,363	+		OKGIIK_14305	0.32	+0.1
3,119,363	+		OKGIIK_14305	0.32	-1.2
3,119,363	+		OKGIIK_14305	0.32	+0.8
3,119,363	+		OKGIIK_14305	0.32	-1.0
3,119,363	+		OKGIIK_14305	0.32	-1.4
3,119,364	-		OKGIIK_14305	0.32	-1.8
3,119,364	-		OKGIIK_14305	0.32	-0.7
3,119,364	-		OKGIIK_14305	0.32	+1.6
3,119,364	-		OKGIIK_14305	0.32	+0.9
3,119,364	-		OKGIIK_14305	0.32	-1.4
3,119,582	+		OKGIIK_14305	0.48	-0.4
3,119,582	+		OKGIIK_14305	0.48	+0.1
3,119,582	+		OKGIIK_14305	0.48	-0.9
3,119,583	-		OKGIIK_14305	0.48	-1.2
3,119,583	-		OKGIIK_14305	0.48	+1.1
3,119,583	-		OKGIIK_14305	0.48	-0.8
3,119,657	+		OKGIIK_14305	0.53	-1.0
3,119,657	+		OKGIIK_14305	0.53	+0.8
3,119,657	+		OKGIIK_14305	0.53	-0.9
3,119,657	+		OKGIIK_14305	0.53	-0.2
3,119,658	-		OKGIIK_14305	0.53	+0.1
3,119,658	-		OKGIIK_14305	0.53	+0.3
3,119,658	-		OKGIIK_14305	0.53	-0.9
3,119,738	+		OKGIIK_14305	0.59	-1.4
3,119,738	+		OKGIIK_14305	0.59	-2.0
3,119,738	+		OKGIIK_14305	0.59	-2.3
3,119,738	+		OKGIIK_14305	0.59	+1.5
3,119,738	+		OKGIIK_14305	0.59	+0.3
3,119,738	+		OKGIIK_14305	0.59	+0.1
3,119,738	+		OKGIIK_14305	0.59	-1.4
3,119,738	+		OKGIIK_14305	0.59	-1.4
3,119,738	+		OKGIIK_14305	0.59	-0.8
3,119,738	+		OKGIIK_14305	0.59	-0.4
3,119,739	-		OKGIIK_14305	0.59	+0.3
3,119,739	-		OKGIIK_14305	0.59	+0.4
3,119,739	-		OKGIIK_14305	0.59	-1.9
3,119,739	-		OKGIIK_14305	0.59	-2.0
3,119,739	-		OKGIIK_14305	0.59	-0.1
3,119,739	-		OKGIIK_14305	0.59	-0.0
3,119,739	-		OKGIIK_14305	0.59	-0.3
3,119,753	+		OKGIIK_14305	0.60	+1.6
3,119,753	+		OKGIIK_14305	0.60	+0.6
3,119,753	+		OKGIIK_14305	0.60	+0.1
3,119,753	+		OKGIIK_14305	0.60	-0.9
3,119,754	-		OKGIIK_14305	0.60	-0.4
3,119,754	-		OKGIIK_14305	0.60	-0.4
3,119,754	-		OKGIIK_14305	0.60	+0.4
3,119,754	-		OKGIIK_14305	0.60	-0.3
3,119,754	-		OKGIIK_14305	0.60	+0.3
3,119,754	-		OKGIIK_14305	0.60	-0.8
3,119,754	-		OKGIIK_14305	0.60	-1.4
3,119,754	-		OKGIIK_14305	0.60	-0.2
3,119,754	-		OKGIIK_14305	0.60	-2.4
3,119,816	+		OKGIIK_14305	0.65	+0.4
3,119,817	-		OKGIIK_14305	0.65	-1.9
3,119,939	+		OKGIIK_14305	0.74	-0.1
3,119,940	-		OKGIIK_14305	0.74	-0.2
3,119,940	-		OKGIIK_14305	0.74	-1.0
3,119,940	-		OKGIIK_14305	0.74	-1.3
3,119,940	-		OKGIIK_14305	0.74	+0.6
3,119,940	-		OKGIIK_14305	0.74	-1.1
3,119,940	-		OKGIIK_14305	0.74	-1.2
3,119,940	-		OKGIIK_14305	0.74	-0.0
3,119,940	-		OKGIIK_14305	0.74	-0.3
3,119,940	-		OKGIIK_14305	0.74	-0.3
3,119,940	-		OKGIIK_14305	0.74	-0.1
3,119,940	-		OKGIIK_14305	0.74	+0.7
3,119,940	-		OKGIIK_14305	0.74	+0.3
3,120,107	+		OKGIIK_14305	0.86	-1.3
3,120,107	+		OKGIIK_14305	0.86	-0.4
3,120,107	+		OKGIIK_14305	0.86	+1.1
3,120,107	+		OKGIIK_14305	0.86	-2.4
3,120,108	-		OKGIIK_14305	0.86	-2.5
3,120,108	-		OKGIIK_14305	0.86	-0.8
3,120,108	-		OKGIIK_14305	0.86	+0.3
3,120,191	+				+0.8
3,120,331	+				+0.5
3,120,331	+				-0.0
3,120,331	+				+0.3
3,120,331	+				+0.3
3,120,331	+				-0.4
3,120,331	+				+0.6
3,120,331	+				-1.2
3,120,331	+				-0.1
3,120,331	+				+0.2
3,120,331	+				+0.3
3,120,331	+				-1.2
3,120,331	+				+1.6
3,120,332	-				-1.7
3,120,332	-				-0.4
3,120,332	-				-0.1
3,120,394	+				-1.0
3,120,422	-				-0.2
3,120,446	+				-1.4
3,120,447	-				+0.5
3,120,528	+		OKGIIK_14310	0.13	+0.5
3,120,528	+		OKGIIK_14310	0.13	+2.3
3,120,529	-		OKGIIK_14310	0.13	-0.2
3,120,529	-		OKGIIK_14310	0.13	-0.1
3,120,529	-		OKGIIK_14310	0.13	+0.4
3,120,902	+		OKGIIK_14310	0.76	-2.6
3,120,903	-		OKGIIK_14310	0.76	+0.6
3,120,903	-		OKGIIK_14310	0.76	+0.3
3,120,903	-		OKGIIK_14310	0.76	-2.3
3,120,903	-		OKGIIK_14310	0.76	-0.1
3,120,981	+		OKGIIK_14310	0.90	-2.0
3,120,981	+		OKGIIK_14310	0.90	+0.7
3,120,981	+		OKGIIK_14310	0.90	-1.4
3,120,981	+		OKGIIK_14310	0.90	-1.4
3,120,981	+		OKGIIK_14310	0.90	+1.1
3,120,981	+		OKGIIK_14310	0.90	+0.4
3,120,981	+		OKGIIK_14310	0.90	+0.3
3,120,981	+		OKGIIK_14310	0.90	+0.6
3,120,981	+		OKGIIK_14310	0.90	-0.7
3,120,982	-		OKGIIK_14310	0.90	-0.1
3,120,982	-		OKGIIK_14310	0.90	-1.2
3,120,982	-		OKGIIK_14310	0.90	-1.7
3,120,982	-		OKGIIK_14310	0.90	-1.2
3,120,982	-		OKGIIK_14310	0.90	+0.7
3,120,982	-		OKGIIK_14310	0.90	+0.2
3,120,982	-		OKGIIK_14310	0.90	-0.4
3,120,982	-		OKGIIK_14310	0.90	+0.1
3,120,982	-		OKGIIK_14310	0.90	-0.1
3,120,982	-		OKGIIK_14310	0.90	-0.1