Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_09405

Experiment: R2A_PIPES pH 4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4.5
2,040,114	+		OKGIIK_09400	0.23	+1.1
2,040,114	+		OKGIIK_09400	0.23	-0.6
2,040,115	-		OKGIIK_09400	0.23	+2.1
2,040,132	+		OKGIIK_09400	0.25	+0.4
2,040,132	+		OKGIIK_09400	0.25	+0.1
2,040,132	+		OKGIIK_09400	0.25	-0.8
2,040,132	+		OKGIIK_09400	0.25	-0.5
2,040,132	+		OKGIIK_09400	0.25	-0.5
2,040,132	+		OKGIIK_09400	0.25	-0.6
2,040,132	+		OKGIIK_09400	0.25	+0.3
2,040,132	+		OKGIIK_09400	0.25	-1.9
2,040,132	+		OKGIIK_09400	0.25	-0.9
2,040,132	+		OKGIIK_09400	0.25	-0.5
2,040,133	-		OKGIIK_09400	0.25	-0.3
2,040,133	-		OKGIIK_09400	0.25	+0.4
2,040,133	-		OKGIIK_09400	0.25	-1.3
2,040,133	-		OKGIIK_09400	0.25	+0.1
2,040,133	-		OKGIIK_09400	0.25	+0.8
2,040,133	-		OKGIIK_09400	0.25	-0.2
2,040,133	-		OKGIIK_09400	0.25	+1.0
2,040,133	-		OKGIIK_09400	0.25	-2.5
2,040,133	-		OKGIIK_09400	0.25	-0.3
2,040,133	-		OKGIIK_09400	0.25	-0.6
2,040,136	+		OKGIIK_09400	0.25	+0.6
2,040,136	+		OKGIIK_09400	0.25	+0.2
2,040,136	+		OKGIIK_09400	0.25	+0.8
2,040,136	+		OKGIIK_09400	0.25	-0.2
2,040,136	+		OKGIIK_09400	0.25	-1.6
2,040,136	+		OKGIIK_09400	0.25	-0.8
2,040,136	+		OKGIIK_09400	0.25	+0.4
2,040,136	+		OKGIIK_09400	0.25	-0.3
2,040,137	-		OKGIIK_09400	0.25	+0.2
2,040,137	-		OKGIIK_09400	0.25	+1.0
2,040,137	-		OKGIIK_09400	0.25	-0.9
2,040,137	-		OKGIIK_09400	0.25	-1.0
2,040,137	-		OKGIIK_09400	0.25	+0.1
2,040,137	-		OKGIIK_09400	0.25	+0.2
2,040,137	-		OKGIIK_09400	0.25	+0.1
2,040,137	-		OKGIIK_09400	0.25	-0.3
2,040,137	-		OKGIIK_09400	0.25	-0.4
2,040,137	-		OKGIIK_09400	0.25	+1.7
2,040,144	+		OKGIIK_09400	0.26	-0.2
2,040,144	+		OKGIIK_09400	0.26	-0.5
2,040,144	+		OKGIIK_09400	0.26	+0.2
2,040,144	+		OKGIIK_09400	0.26	-0.9
2,040,144	+		OKGIIK_09400	0.26	-0.3
2,040,144	+		OKGIIK_09400	0.26	-0.8
2,040,144	+		OKGIIK_09400	0.26	+0.4
2,040,144	+		OKGIIK_09400	0.26	-1.4
2,040,144	+		OKGIIK_09400	0.26	+0.3
2,040,144	+		OKGIIK_09400	0.26	+0.8
2,040,144	+		OKGIIK_09400	0.26	+0.8
2,040,144	+		OKGIIK_09400	0.26	+0.7
2,040,144	+		OKGIIK_09400	0.26	-0.2
2,040,144	+		OKGIIK_09400	0.26	+0.2
2,040,144	+		OKGIIK_09400	0.26	-0.6
2,040,144	+		OKGIIK_09400	0.26	-1.9
2,040,144	+		OKGIIK_09400	0.26	-0.2
2,040,144	+		OKGIIK_09400	0.26	+0.4
2,040,144	+		OKGIIK_09400	0.26	-1.4
2,040,144	+		OKGIIK_09400	0.26	-0.8
2,040,144	+		OKGIIK_09400	0.26	-0.8
2,040,145	-		OKGIIK_09400	0.26	-2.3
2,040,145	-		OKGIIK_09400	0.26	+1.0
2,040,145	-		OKGIIK_09400	0.26	-1.1
2,040,145	-		OKGIIK_09400	0.26	-0.7
2,040,145	-		OKGIIK_09400	0.26	-1.1
2,040,145	-		OKGIIK_09400	0.26	+1.6
2,040,145	-		OKGIIK_09400	0.26	-0.6
2,040,145	-		OKGIIK_09400	0.26	+0.5
2,040,145	-		OKGIIK_09400	0.26	-0.9
2,040,145	-		OKGIIK_09400	0.26	+1.2
2,040,145	-		OKGIIK_09400	0.26	+0.1
2,040,145	-		OKGIIK_09400	0.26	-0.6
2,040,145	-		OKGIIK_09400	0.26	-0.0
2,040,145	-		OKGIIK_09400	0.26	-1.6
2,040,145	-		OKGIIK_09400	0.26	-1.8
2,040,145	-		OKGIIK_09400	0.26	+0.9
2,040,145	-		OKGIIK_09400	0.26	+0.1
2,040,145	-		OKGIIK_09400	0.26	-0.8
2,040,145	-		OKGIIK_09400	0.26	-1.2
2,040,364	+		OKGIIK_09400	0.44	+0.0
2,040,364	+		OKGIIK_09400	0.44	-0.8
2,040,364	+		OKGIIK_09400	0.44	-1.2
2,040,365	-		OKGIIK_09400	0.44	-0.8
2,040,365	-		OKGIIK_09400	0.44	-0.3
2,040,365	-		OKGIIK_09400	0.44	-2.2
2,040,365	-		OKGIIK_09400	0.44	+0.6
2,040,365	-		OKGIIK_09400	0.44	+0.1
2,040,365	-		OKGIIK_09400	0.44	-0.6
2,040,365	-		OKGIIK_09400	0.44	-0.5
2,040,409	+		OKGIIK_09400	0.48	-1.4
2,040,409	+		OKGIIK_09400	0.48	+0.9
2,040,409	+		OKGIIK_09400	0.48	-2.9
2,040,409	+		OKGIIK_09400	0.48	+0.5
2,040,409	+		OKGIIK_09400	0.48	-1.0
2,040,409	+		OKGIIK_09400	0.48	-0.5
2,040,410	-		OKGIIK_09400	0.48	+0.9
2,040,410	-		OKGIIK_09400	0.48	+2.0
2,040,410	-		OKGIIK_09400	0.48	-0.9
2,040,410	-		OKGIIK_09400	0.48	-0.9
2,040,410	-		OKGIIK_09400	0.48	-0.5
2,040,410	-		OKGIIK_09400	0.48	-0.6
2,040,411	+		OKGIIK_09400	0.48	+0.1
2,040,411	+		OKGIIK_09400	0.48	-0.4
2,040,411	+		OKGIIK_09400	0.48	-0.4
2,040,411	+		OKGIIK_09400	0.48	-2.5
2,040,411	+		OKGIIK_09400	0.48	-1.2
2,040,411	+		OKGIIK_09400	0.48	-1.2
2,040,411	+		OKGIIK_09400	0.48	+0.9
2,040,411	+		OKGIIK_09400	0.48	+0.7
2,040,411	+		OKGIIK_09400	0.48	+0.3
2,040,412	-		OKGIIK_09400	0.48	+0.6
2,040,592	+		OKGIIK_09400	0.63	-0.3
2,040,921	+				+1.4
2,040,921	+				+0.1
2,040,922	-				+0.9
2,040,922	-				+0.2
2,041,100	+				-1.5
2,041,100	+				+0.6
2,041,100	+				-1.4
2,041,101	-				-0.7
2,041,101	-				-0.4
2,041,101	-				-0.3
2,041,130	+		OKGIIK_09405	0.11	-0.5
2,041,130	+		OKGIIK_09405	0.11	-0.0
2,041,130	+		OKGIIK_09405	0.11	+0.4
2,041,130	+		OKGIIK_09405	0.11	-0.4
2,041,131	-		OKGIIK_09405	0.11	-0.7
2,041,131	-		OKGIIK_09405	0.11	+0.6
2,041,131	-		OKGIIK_09405	0.11	+0.5
2,041,202	+		OKGIIK_09405	0.19	+0.0
2,041,202	+		OKGIIK_09405	0.19	-2.2
2,041,202	+		OKGIIK_09405	0.19	+0.3
2,041,202	+		OKGIIK_09405	0.19	-0.9
2,041,202	+		OKGIIK_09405	0.19	-0.4
2,041,202	+		OKGIIK_09405	0.19	-2.3
2,041,202	+		OKGIIK_09405	0.19	-0.1
2,041,202	+		OKGIIK_09405	0.19	+0.4
2,041,202	+		OKGIIK_09405	0.19	+0.7
2,041,202	+		OKGIIK_09405	0.19	+0.4
2,041,203	-		OKGIIK_09405	0.19	-0.2
2,041,203	-		OKGIIK_09405	0.19	-1.8
2,041,203	-		OKGIIK_09405	0.19	-1.9
2,041,203	-		OKGIIK_09405	0.19	+0.0
2,041,203	-		OKGIIK_09405	0.19	-0.3
2,041,203	-		OKGIIK_09405	0.19	-0.2
2,041,203	-		OKGIIK_09405	0.19	-1.1
2,041,203	-		OKGIIK_09405	0.19	+0.7
2,041,203	-		OKGIIK_09405	0.19	-0.6
2,041,214	+		OKGIIK_09405	0.20	-1.6
2,041,214	+		OKGIIK_09405	0.20	-1.2
2,041,214	+		OKGIIK_09405	0.20	+1.0
2,041,214	+		OKGIIK_09405	0.20	+0.8
2,041,215	-		OKGIIK_09405	0.20	+0.0
2,041,215	-		OKGIIK_09405	0.20	-0.4
2,041,215	-		OKGIIK_09405	0.20	-1.4
2,041,325	+		OKGIIK_09405	0.32	-0.5
2,041,325	+		OKGIIK_09405	0.32	-1.8
2,041,325	+		OKGIIK_09405	0.32	+0.2
2,041,325	+		OKGIIK_09405	0.32	+0.5
2,041,325	+		OKGIIK_09405	0.32	+0.4
2,041,325	+		OKGIIK_09405	0.32	+1.1
2,041,325	+		OKGIIK_09405	0.32	+0.9
2,041,325	+		OKGIIK_09405	0.32	-0.0
2,041,325	+		OKGIIK_09405	0.32	+0.2
2,041,325	+		OKGIIK_09405	0.32	+0.1
2,041,325	+		OKGIIK_09405	0.32	-0.4
2,041,325	+		OKGIIK_09405	0.32	+0.2
2,041,325	+		OKGIIK_09405	0.32	-0.6
2,041,325	+		OKGIIK_09405	0.32	+1.1
2,041,325	+		OKGIIK_09405	0.32	+0.4
2,041,325	+		OKGIIK_09405	0.32	-0.5
2,041,325	+		OKGIIK_09405	0.32	+1.1
2,041,326	-		OKGIIK_09405	0.32	+0.2
2,041,326	-		OKGIIK_09405	0.32	+0.1
2,041,326	-		OKGIIK_09405	0.32	-0.8
2,041,326	-		OKGIIK_09405	0.32	+0.1
2,041,326	-		OKGIIK_09405	0.32	+0.9
2,041,326	-		OKGIIK_09405	0.32	-0.3
2,041,326	-		OKGIIK_09405	0.32	+0.1
2,041,326	-		OKGIIK_09405	0.32	+0.4
2,041,326	-		OKGIIK_09405	0.32	+0.4
2,041,326	-		OKGIIK_09405	0.32	-1.4
2,041,326	-		OKGIIK_09405	0.32	+2.2
2,041,326	-		OKGIIK_09405	0.32	-0.9
2,041,326	-		OKGIIK_09405	0.32	-0.9
2,041,326	-		OKGIIK_09405	0.32	-0.4
2,041,326	-		OKGIIK_09405	0.32	-0.9
2,041,326	-		OKGIIK_09405	0.32	-0.9
2,041,326	-		OKGIIK_09405	0.32	+1.9
2,041,326	-		OKGIIK_09405	0.32	-1.2
2,041,326	-		OKGIIK_09405	0.32	-1.9
2,041,326	-		OKGIIK_09405	0.32	+0.1
2,041,589	+		OKGIIK_09405	0.60	+0.4
2,041,589	+		OKGIIK_09405	0.60	-1.4
2,041,589	+		OKGIIK_09405	0.60	+0.4
2,041,589	+		OKGIIK_09405	0.60	-2.0
2,041,590	-		OKGIIK_09405	0.60	+0.9
2,041,590	-		OKGIIK_09405	0.60	-1.2
2,041,590	-		OKGIIK_09405	0.60	-0.4
2,041,590	-		OKGIIK_09405	0.60	-0.9
2,041,590	-		OKGIIK_09405	0.60	+1.4
2,041,590	-		OKGIIK_09405	0.60	+0.4
2,041,733	+		OKGIIK_09405	0.75	-0.9
2,041,733	+		OKGIIK_09405	0.75	-0.9
2,041,733	+		OKGIIK_09405	0.75	-0.6
2,041,733	+		OKGIIK_09405	0.75	-0.4
2,041,733	+		OKGIIK_09405	0.75	+0.4
2,041,734	-		OKGIIK_09405	0.75	-1.8
2,041,734	-		OKGIIK_09405	0.75	-1.4
2,041,734	-		OKGIIK_09405	0.75	-0.6
2,041,734	-		OKGIIK_09405	0.75	+0.0
2,041,817	+		OKGIIK_09405	0.84	-1.6
2,041,817	+		OKGIIK_09405	0.84	-0.1
2,041,817	+		OKGIIK_09405	0.84	-0.4
2,041,817	+		OKGIIK_09405	0.84	+1.2
2,041,817	+		OKGIIK_09405	0.84	+0.5
2,041,818	-		OKGIIK_09405	0.84	-2.2
2,041,818	-		OKGIIK_09405	0.84	-0.6
2,041,818	-		OKGIIK_09405	0.84	+1.0
2,041,818	-		OKGIIK_09405	0.84	-0.5
2,041,818	-		OKGIIK_09405	0.84	+0.9
2,041,818	-		OKGIIK_09405	0.84	-0.9
2,041,818	-		OKGIIK_09405	0.84	-1.4
2,041,818	-		OKGIIK_09405	0.84	+0.2
2,041,919	-				-1.9
2,041,940	+				-1.0
2,041,940	+				+0.7
2,041,940	+				+1.2
2,041,940	+				-1.0
2,041,940	+				+0.7
2,041,940	+				-2.0
2,041,940	+				-1.8
2,041,940	+				-2.0
2,041,940	+				-1.2
2,041,940	+				-0.2
2,041,940	+				-1.0
2,041,940	+				-0.9
2,041,941	-				+1.4
2,041,941	-				-0.9
2,041,941	-				+0.2
2,041,941	-				-2.0
2,041,941	-				-0.7
2,042,070	-	lolD	OKGIIK_09410	0.15	+0.6
2,042,632	+				+0.7
2,042,710	+				+0.6
2,042,710	+				+0.7
2,042,710	+				+0.1
2,042,710	+				-0.6
2,042,711	-				-0.9
2,042,711	-				+0.1
2,042,711	-				-1.0
2,042,726	+				+0.5
2,042,727	-				-2.9
2,042,727	-				+0.0
2,042,806	+				-0.9
2,042,807	-				-1.0
2,042,807	-				+1.1
2,042,807	-				-0.4
2,042,807	-				+0.4
2,042,855	+				-0.2
2,042,856	-				+0.8
2,042,856	-				-0.9
2,042,856	-				-0.5
2,042,856	-				-0.6