Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06968 and MPMX19_06969 overlap by 4 nucleotides MPMX19_06969 and MPMX19_06970 are separated by 8 nucleotides MPMX19_06970 and MPMX19_06971 are separated by 23 nucleotides
MPMX19_06968: MPMX19_06968 - hypothetical protein, at 245,250 to 246,743
_06968
MPMX19_06969: MPMX19_06969 - hypothetical protein, at 246,740 to 246,994
_06969
MPMX19_06970: MPMX19_06970 - putative ABC transporter ATP-binding protein YknY, at 247,003 to 247,695
_06970
MPMX19_06971: MPMX19_06971 - Macrolide export ATP-binding/permease protein MacB, at 247,719 to 248,921
_06971
Position (kb) 246
247 Strain fitness (log2 ratio) -1
0
1
2 at 245.775 kb on + strand, within MPMX19_06968 at 245.776 kb on - strand, within MPMX19_06968 at 245.776 kb on - strand, within MPMX19_06968 at 245.776 kb on - strand, within MPMX19_06968 at 245.835 kb on + strand, within MPMX19_06968 at 245.835 kb on + strand, within MPMX19_06968 at 245.835 kb on + strand, within MPMX19_06968 at 245.836 kb on - strand, within MPMX19_06968 at 245.836 kb on - strand, within MPMX19_06968 at 245.836 kb on - strand, within MPMX19_06968 at 245.836 kb on - strand, within MPMX19_06968 at 246.165 kb on + strand, within MPMX19_06968 at 246.166 kb on - strand, within MPMX19_06968 at 246.501 kb on + strand, within MPMX19_06968 at 246.501 kb on + strand, within MPMX19_06968 at 246.502 kb on - strand, within MPMX19_06968 at 246.502 kb on - strand, within MPMX19_06968 at 246.502 kb on - strand, within MPMX19_06968 at 246.502 kb on - strand, within MPMX19_06968 at 246.657 kb on + strand at 246.657 kb on + strand at 246.657 kb on + strand at 246.658 kb on - strand at 246.658 kb on - strand at 246.917 kb on + strand, within MPMX19_06969 at 246.917 kb on + strand, within MPMX19_06969 at 246.917 kb on + strand, within MPMX19_06969 at 246.918 kb on - strand, within MPMX19_06969 at 247.032 kb on + strand at 247.032 kb on + strand at 247.032 kb on + strand at 247.032 kb on + strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.284 kb on - strand, within MPMX19_06970
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 245,775 + MPMX19_06968 0.35 -0.9 245,776 - MPMX19_06968 0.35 -1.1 245,776 - MPMX19_06968 0.35 -0.6 245,776 - MPMX19_06968 0.35 +0.1 245,835 + MPMX19_06968 0.39 -0.1 245,835 + MPMX19_06968 0.39 -0.5 245,835 + MPMX19_06968 0.39 -1.2 245,836 - MPMX19_06968 0.39 -1.2 245,836 - MPMX19_06968 0.39 -0.0 245,836 - MPMX19_06968 0.39 -0.9 245,836 - MPMX19_06968 0.39 +1.3 246,165 + MPMX19_06968 0.61 -1.2 246,166 - MPMX19_06968 0.61 +0.3 246,501 + MPMX19_06968 0.84 +0.3 246,501 + MPMX19_06968 0.84 +0.1 246,502 - MPMX19_06968 0.84 +1.9 246,502 - MPMX19_06968 0.84 -1.5 246,502 - MPMX19_06968 0.84 -0.3 246,502 - MPMX19_06968 0.84 -1.2 246,657 + -1.2 246,657 + -0.4 246,657 + -1.6 246,658 - +0.5 246,658 - +1.4 246,917 + MPMX19_06969 0.69 -1.5 246,917 + MPMX19_06969 0.69 -1.1 246,917 + MPMX19_06969 0.69 -1.0 246,918 - MPMX19_06969 0.70 -1.3 247,032 + -0.3 247,032 + +0.3 247,032 + -1.6 247,032 + -1.5 247,033 - -1.0 247,033 - -0.6 247,033 - -0.6 247,033 - -0.5 247,033 - -0.2 247,033 - -0.2 247,033 - -0.7 247,284 - MPMX19_06970 0.41 +0.1
Or see this region's nucleotide sequence