Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06932 and MPMX19_06933 are separated by 137 nucleotides MPMX19_06933 and MPMX19_06934 overlap by 4 nucleotides MPMX19_06934 and MPMX19_06935 are separated by 31 nucleotides
MPMX19_06932: MPMX19_06932 - hypothetical protein, at 205,218 to 205,895
_06932
MPMX19_06933: MPMX19_06933 - Manganese transport system ATP-binding protein MntB, at 206,033 to 206,803
_06933
MPMX19_06934: MPMX19_06934 - Manganese transport system membrane protein MntB, at 206,800 to 207,684
_06934
MPMX19_06935: MPMX19_06935 - putative periplasmic iron-binding protein, at 207,716 to 208,639
_06935
Position (kb) 206
207 Strain fitness (log2 ratio) -2
-1
0
1
2 at 205.319 kb on - strand, within MPMX19_06932 at 205.344 kb on - strand, within MPMX19_06932 at 205.344 kb on - strand, within MPMX19_06932 at 205.344 kb on - strand, within MPMX19_06932 at 205.536 kb on + strand, within MPMX19_06932 at 205.536 kb on + strand, within MPMX19_06932 at 205.536 kb on + strand, within MPMX19_06932 at 205.536 kb on + strand, within MPMX19_06932 at 205.536 kb on + strand, within MPMX19_06932 at 205.536 kb on + strand, within MPMX19_06932 at 205.537 kb on - strand, within MPMX19_06932 at 205.537 kb on - strand, within MPMX19_06932 at 205.537 kb on - strand, within MPMX19_06932 at 205.537 kb on - strand, within MPMX19_06932 at 205.647 kb on + strand, within MPMX19_06932 at 205.647 kb on + strand, within MPMX19_06932 at 205.647 kb on + strand, within MPMX19_06932 at 205.890 kb on + strand at 205.890 kb on + strand at 205.890 kb on + strand at 206.276 kb on + strand, within MPMX19_06933 at 206.276 kb on + strand, within MPMX19_06933 at 206.277 kb on - strand, within MPMX19_06933 at 206.277 kb on - strand, within MPMX19_06933 at 206.277 kb on - strand, within MPMX19_06933 at 206.809 kb on + strand at 206.809 kb on + strand at 206.810 kb on - strand at 206.810 kb on - strand at 206.810 kb on - strand at 206.810 kb on - strand at 207.115 kb on + strand, within MPMX19_06934 at 207.115 kb on + strand, within MPMX19_06934 at 207.115 kb on + strand, within MPMX19_06934 at 207.115 kb on + strand, within MPMX19_06934 at 207.116 kb on - strand, within MPMX19_06934 at 207.116 kb on - strand, within MPMX19_06934 at 207.116 kb on - strand, within MPMX19_06934
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 205,319 - MPMX19_06932 0.15 -0.5 205,344 - MPMX19_06932 0.19 +0.1 205,344 - MPMX19_06932 0.19 +0.1 205,344 - MPMX19_06932 0.19 -0.3 205,536 + MPMX19_06932 0.47 +1.9 205,536 + MPMX19_06932 0.47 +0.2 205,536 + MPMX19_06932 0.47 +0.6 205,536 + MPMX19_06932 0.47 +0.5 205,536 + MPMX19_06932 0.47 -2.0 205,536 + MPMX19_06932 0.47 -0.1 205,537 - MPMX19_06932 0.47 -0.8 205,537 - MPMX19_06932 0.47 -1.4 205,537 - MPMX19_06932 0.47 +2.1 205,537 - MPMX19_06932 0.47 +1.2 205,647 + MPMX19_06932 0.63 -0.9 205,647 + MPMX19_06932 0.63 -0.1 205,647 + MPMX19_06932 0.63 -1.9 205,890 + +0.1 205,890 + +0.5 205,890 + -1.5 206,276 + MPMX19_06933 0.32 +0.1 206,276 + MPMX19_06933 0.32 -1.6 206,277 - MPMX19_06933 0.32 -1.7 206,277 - MPMX19_06933 0.32 -1.5 206,277 - MPMX19_06933 0.32 -0.1 206,809 + +1.1 206,809 + -0.6 206,810 - +0.8 206,810 - +0.5 206,810 - -1.5 206,810 - -0.6 207,115 + MPMX19_06934 0.36 -0.0 207,115 + MPMX19_06934 0.36 -0.7 207,115 + MPMX19_06934 0.36 -0.8 207,115 + MPMX19_06934 0.36 +0.9 207,116 - MPMX19_06934 0.36 -0.3 207,116 - MPMX19_06934 0.36 -0.6 207,116 - MPMX19_06934 0.36 -1.8
Or see this region's nucleotide sequence