Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06841

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
106,309	-		MPMX19_06840	0.18	-0.7
106,309	-		MPMX19_06840	0.18	-0.7
106,437	+		MPMX19_06840	0.32	-0.2
106,437	+		MPMX19_06840	0.32	-0.2
106,438	-		MPMX19_06840	0.33	+0.8
106,438	-		MPMX19_06840	0.33	-1.1
106,536	+		MPMX19_06840	0.44	+0.3
106,536	+		MPMX19_06840	0.44	-1.4
106,536	+		MPMX19_06840	0.44	-1.1
106,536	+		MPMX19_06840	0.44	-2.5
106,536	+		MPMX19_06840	0.44	-0.2
106,536	+		MPMX19_06840	0.44	-0.3
106,536	+		MPMX19_06840	0.44	+0.9
106,536	+		MPMX19_06840	0.44	-0.5
106,536	+		MPMX19_06840	0.44	+1.5
106,536	+		MPMX19_06840	0.44	-0.7
106,536	+		MPMX19_06840	0.44	-1.2
106,536	+		MPMX19_06840	0.44	-1.2
106,537	-		MPMX19_06840	0.44	+0.1
106,537	-		MPMX19_06840	0.44	-1.0
106,537	-		MPMX19_06840	0.44	+1.3
106,537	-		MPMX19_06840	0.44	-1.4
106,537	-		MPMX19_06840	0.44	-1.2
106,537	-		MPMX19_06840	0.44	+1.1
106,537	-		MPMX19_06840	0.44	-1.4
106,537	-		MPMX19_06840	0.44	-1.2
106,537	-		MPMX19_06840	0.44	-1.2
106,537	-		MPMX19_06840	0.44	-0.8
106,537	-		MPMX19_06840	0.44	+0.1
106,537	-		MPMX19_06840	0.44	-1.6
106,537	-		MPMX19_06840	0.44	-0.9
106,537	-		MPMX19_06840	0.44	+1.3
106,537	-		MPMX19_06840	0.44	+0.1
106,537	-		MPMX19_06840	0.44	-1.4
106,537	-		MPMX19_06840	0.44	+0.4
106,537	-		MPMX19_06840	0.44	+0.2
106,537	-		MPMX19_06840	0.44	+0.0
106,537	-		MPMX19_06840	0.44	-0.9
106,537	-		MPMX19_06840	0.44	-1.0
106,537	-		MPMX19_06840	0.44	-0.3
106,537	-		MPMX19_06840	0.44	+0.6
106,537	-		MPMX19_06840	0.44	-1.4
106,537	-		MPMX19_06840	0.44	-1.6
106,537	-		MPMX19_06840	0.44	-1.5
106,537	-		MPMX19_06840	0.44	-0.3
106,537	-		MPMX19_06840	0.44	-0.4
106,537	-		MPMX19_06840	0.44	-1.2
106,537	-		MPMX19_06840	0.44	+1.9
106,537	-		MPMX19_06840	0.44	-1.0
106,752	+		MPMX19_06840	0.68	-0.7
106,764	+		MPMX19_06840	0.69	+0.3
106,764	+		MPMX19_06840	0.69	-0.8
106,764	+		MPMX19_06840	0.69	+0.7
106,764	+		MPMX19_06840	0.69	+0.1
106,765	-		MPMX19_06840	0.69	-1.0
106,765	-		MPMX19_06840	0.69	+1.1
106,765	-		MPMX19_06840	0.69	-1.6
106,797	+		MPMX19_06840	0.73	+0.0
106,797	+		MPMX19_06840	0.73	-0.1
106,797	+		MPMX19_06840	0.73	-1.5
106,881	+		MPMX19_06840	0.82	-0.4
106,881	+		MPMX19_06840	0.82	-1.5
106,881	+		MPMX19_06840	0.82	-1.1
106,882	-		MPMX19_06840	0.82	-1.1
106,956	+				-1.6
107,096	+				-0.2
107,187	-		MPMX19_06841	0.16	-1.4
107,229	-		MPMX19_06841	0.20	-1.5
107,229	-		MPMX19_06841	0.20	-0.8
107,229	-		MPMX19_06841	0.20	+0.3
107,339	+		MPMX19_06841	0.32	-0.4
107,340	-		MPMX19_06841	0.32	+0.1
107,340	-		MPMX19_06841	0.32	+0.8
107,340	-		MPMX19_06841	0.32	-0.7
107,340	-		MPMX19_06841	0.32	-0.7
107,340	-		MPMX19_06841	0.32	+0.2
107,340	-		MPMX19_06841	0.32	-0.2
107,432	+		MPMX19_06841	0.42	-0.9
107,468	+		MPMX19_06841	0.46	-0.4
107,468	+		MPMX19_06841	0.46	+0.3
107,468	+		MPMX19_06841	0.46	+1.5
107,468	+		MPMX19_06841	0.46	-1.2
107,468	+		MPMX19_06841	0.46	-0.1
107,468	+		MPMX19_06841	0.46	+1.1
107,468	+		MPMX19_06841	0.46	-0.9
107,469	-		MPMX19_06841	0.46	-1.0
107,469	-		MPMX19_06841	0.46	-1.9
107,469	-		MPMX19_06841	0.46	-0.5
107,469	-		MPMX19_06841	0.46	+0.3
107,469	-		MPMX19_06841	0.46	-2.6
107,469	-		MPMX19_06841	0.46	-0.6
107,469	-		MPMX19_06841	0.46	+1.1
107,501	+		MPMX19_06841	0.49	-0.2
107,591	+		MPMX19_06841	0.58	+0.1
107,592	-		MPMX19_06841	0.59	+0.5
107,721	+		MPMX19_06841	0.72	-1.2
107,721	+		MPMX19_06841	0.72	-0.3
107,721	+		MPMX19_06841	0.72	-0.6
107,721	+		MPMX19_06841	0.72	+0.2
107,721	+		MPMX19_06841	0.72	+0.5
107,721	+		MPMX19_06841	0.72	-0.7
107,721	+		MPMX19_06841	0.72	+1.8
107,721	+		MPMX19_06841	0.72	-0.7
107,722	-		MPMX19_06841	0.72	+0.0
107,722	-		MPMX19_06841	0.72	-1.1
107,722	-		MPMX19_06841	0.72	-0.3
107,722	-		MPMX19_06841	0.72	-1.7
107,732	+		MPMX19_06841	0.73	-0.8
107,732	+		MPMX19_06841	0.73	-0.5
107,732	+		MPMX19_06841	0.73	+1.5
107,733	-		MPMX19_06841	0.73	+1.1
107,775	-		MPMX19_06841	0.78	-1.1
107,917	+				+1.3
107,917	+				+0.9
107,918	-				-0.6
108,090	+				-1.2
108,091	-				-1.4
108,111	+				-0.8
108,111	+				-1.4
108,111	+				+0.7
108,111	+				-1.8
108,111	+				-0.9
108,111	+				-2.2
108,111	+				-0.5
108,111	+				-0.9
108,111	+				-0.5
108,111	+				+0.3
108,112	-				-0.7
108,112	-				+0.1
108,112	-				-0.4
108,112	-				+2.1
108,112	-				-1.3
108,112	-				-0.4
108,112	-				+0.1
108,126	+				+0.5
108,126	+				-0.8
108,127	-				-1.6
108,127	-				-0.4
108,201	+				-0.9
108,201	+				-0.1
108,201	+				+1.7
108,201	+				-0.0
108,201	+				-0.6
108,201	+				-1.5
108,202	-				-0.6
108,202	-				-2.3
108,202	-				-1.5
108,202	-				-1.5
108,255	+		MPMX19_06842	0.10	-0.3
108,255	+		MPMX19_06842	0.10	-1.1
108,255	+		MPMX19_06842	0.10	+0.9
108,256	-		MPMX19_06842	0.10	+0.4
108,256	-		MPMX19_06842	0.10	-0.8
108,256	-		MPMX19_06842	0.10	-2.7
108,330	+		MPMX19_06842	0.15	-1.5
108,330	+		MPMX19_06842	0.15	-1.9
108,331	-		MPMX19_06842	0.15	-0.7
108,331	-		MPMX19_06842	0.15	-0.8
108,363	+		MPMX19_06842	0.17	-0.2
108,363	+		MPMX19_06842	0.17	-0.1
108,438	+		MPMX19_06842	0.22	+0.5
108,438	+		MPMX19_06842	0.22	-0.6
108,438	+		MPMX19_06842	0.22	+1.3
108,438	+		MPMX19_06842	0.22	+0.3
108,438	+		MPMX19_06842	0.22	-0.5
108,439	-		MPMX19_06842	0.22	-0.0
108,439	-		MPMX19_06842	0.22	+0.0
108,439	-		MPMX19_06842	0.22	+1.6
108,439	-		MPMX19_06842	0.22	-1.9
108,439	-		MPMX19_06842	0.22	-0.4
108,744	+		MPMX19_06842	0.41	+0.2
108,744	+		MPMX19_06842	0.41	-0.9
108,744	+		MPMX19_06842	0.41	-0.7
108,744	+		MPMX19_06842	0.41	+0.2
108,744	+		MPMX19_06842	0.41	-0.7
108,745	-		MPMX19_06842	0.41	+0.5
108,745	-		MPMX19_06842	0.41	+0.4
108,745	-		MPMX19_06842	0.41	-1.6
108,745	-		MPMX19_06842	0.41	-1.1
108,813	+		MPMX19_06842	0.45	-1.4
108,813	+		MPMX19_06842	0.45	-0.1
108,813	+		MPMX19_06842	0.45	+0.5
108,813	+		MPMX19_06842	0.45	+0.2
108,813	+		MPMX19_06842	0.45	-0.1
108,814	-		MPMX19_06842	0.45	+1.7
108,814	-		MPMX19_06842	0.45	-0.1
108,814	-		MPMX19_06842	0.45	+0.9