Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06812

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
75,841	+		MPMX19_06810	0.57	-0.2
75,842	-		MPMX19_06810	0.57	-0.2
75,842	-		MPMX19_06810	0.57	-1.2
75,842	-		MPMX19_06810	0.57	-0.3
75,842	-		MPMX19_06810	0.57	+2.1
75,842	-		MPMX19_06810	0.57	-1.0
75,842	-		MPMX19_06810	0.57	+0.7
75,997	+		MPMX19_06810	0.69	-0.0
75,998	-		MPMX19_06810	0.69	-0.2
75,998	-		MPMX19_06810	0.69	+0.3
76,000	+		MPMX19_06810	0.69	+0.1
76,000	+		MPMX19_06810	0.69	-0.2
76,000	+		MPMX19_06810	0.69	+0.9
76,001	-		MPMX19_06810	0.69	-0.9
76,030	+		MPMX19_06810	0.71	-0.1
76,078	+		MPMX19_06810	0.75	-0.4
76,079	-		MPMX19_06810	0.75	-0.6
76,114	+		MPMX19_06810	0.78	+0.3
76,141	+		MPMX19_06810	0.80	-1.3
76,291	+				-1.2
76,292	-				-0.4
76,369	+				-1.5
76,369	+				+0.8
76,381	+				-0.7
76,381	+				-1.2
76,468	+		MPMX19_06811	0.14	+0.8
76,468	+		MPMX19_06811	0.14	+1.1
76,468	+		MPMX19_06811	0.14	-0.5
76,468	+		MPMX19_06811	0.14	-0.7
76,469	-		MPMX19_06811	0.14	-1.2
76,469	-		MPMX19_06811	0.14	-0.0
76,469	-		MPMX19_06811	0.14	-1.2
76,600	+		MPMX19_06811	0.55	-1.4
76,600	+		MPMX19_06811	0.55	-1.5
76,600	+		MPMX19_06811	0.55	-0.9
76,601	-		MPMX19_06811	0.55	-1.2
76,601	-		MPMX19_06811	0.55	-2.0
76,625	-		MPMX19_06811	0.62	+0.4
76,708	+		MPMX19_06811	0.88	-0.1
76,708	+		MPMX19_06811	0.88	+0.1
76,708	+		MPMX19_06811	0.88	-0.9
76,708	+		MPMX19_06811	0.88	-0.9
76,708	+		MPMX19_06811	0.88	+0.5
76,708	+		MPMX19_06811	0.88	-2.8
76,709	-		MPMX19_06811	0.88	-0.9
76,709	-		MPMX19_06811	0.88	-0.2
76,709	-		MPMX19_06811	0.88	-0.9
76,709	-		MPMX19_06811	0.88	-1.4
76,745	-				-0.2
76,970	+		MPMX19_06812	0.10	-0.1
76,971	-		MPMX19_06812	0.10	-1.4
76,971	-		MPMX19_06812	0.10	+0.4
76,992	-		MPMX19_06812	0.11	-0.5
76,992	-		MPMX19_06812	0.11	+0.4
77,015	+		MPMX19_06812	0.12	-2.2
77,015	+		MPMX19_06812	0.12	-1.1
77,048	+		MPMX19_06812	0.14	-0.9
77,049	-		MPMX19_06812	0.14	+0.4
77,049	-		MPMX19_06812	0.14	-1.4
77,187	-		MPMX19_06812	0.22	-0.9
77,963	+		MPMX19_06812	0.65	-1.5
77,964	-		MPMX19_06812	0.65	-1.2
77,964	-		MPMX19_06812	0.65	-2.0
78,257	+		MPMX19_06812	0.81	+0.5
78,257	+		MPMX19_06812	0.81	+0.8
78,258	-		MPMX19_06812	0.81	-1.1
78,258	-		MPMX19_06812	0.81	+1.3
78,258	-		MPMX19_06812	0.81	-1.5
78,644	+				-1.7
78,644	+				+0.1
78,895	+		MPMX19_06813	0.17	-1.1
79,054	+		MPMX19_06813	0.29	-1.5
79,054	+		MPMX19_06813	0.29	-1.5
79,054	+		MPMX19_06813	0.29	+0.8
79,054	+		MPMX19_06813	0.29	+0.5
79,054	+		MPMX19_06813	0.29	-0.3
79,054	+		MPMX19_06813	0.29	-1.4
79,054	+		MPMX19_06813	0.29	+0.9
79,054	+		MPMX19_06813	0.29	+0.8
79,054	+		MPMX19_06813	0.29	-0.9
79,054	+		MPMX19_06813	0.29	-2.6
79,054	+		MPMX19_06813	0.29	+0.7
79,055	-		MPMX19_06813	0.29	-1.4
79,055	-		MPMX19_06813	0.29	-0.8
79,055	-		MPMX19_06813	0.29	-1.1
79,055	-		MPMX19_06813	0.29	-0.2
79,055	-		MPMX19_06813	0.29	-1.2
79,055	-		MPMX19_06813	0.29	-0.2
79,303	+		MPMX19_06813	0.49	-0.5
79,303	+		MPMX19_06813	0.49	-1.1
79,303	+		MPMX19_06813	0.49	-0.5
79,304	-		MPMX19_06813	0.49	-1.1
79,304	-		MPMX19_06813	0.49	+0.5
79,304	-		MPMX19_06813	0.49	+0.8
79,304	-		MPMX19_06813	0.49	-1.9
79,561	+		MPMX19_06813	0.69	-0.1
79,561	+		MPMX19_06813	0.69	+1.4
79,561	+		MPMX19_06813	0.69	-2.8
79,561	+		MPMX19_06813	0.69	+0.1
79,561	+		MPMX19_06813	0.69	-2.0
79,561	+		MPMX19_06813	0.69	+0.6
79,561	+		MPMX19_06813	0.69	-2.6
79,561	+		MPMX19_06813	0.69	+0.2
79,562	-		MPMX19_06813	0.69	-0.1
79,562	-		MPMX19_06813	0.69	-0.9
79,562	-		MPMX19_06813	0.69	-1.6
79,562	-		MPMX19_06813	0.69	-2.2