Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06577

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NL-CCM, start OD=0.3
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49,970	+			-0.2
49,970	+			-1.3
49,970	+			-0.9
49,970	+			-1.8
49,970	+			-1.5
49,970	+			-0.4
49,970	+			-0.4
49,970	+			-1.1
49,971	-			-0.7
49,971	-			-1.5
49,971	-			-0.9
49,971	-			-0.3
49,971	-			-0.5
49,971	-			+0.5
49,971	-			-0.2
49,971	-			-0.1
50,032	-			+0.3
50,164	+			-1.5
50,164	+			-1.8
50,164	+			-1.7
50,165	-			+1.1
50,165	-			+0.6
50,165	-			+0.1
50,165	-			-0.6
50,165	-			-0.6
50,362	+			-1.1
50,362	+			-1.1
50,362	+			-0.1
50,362	+			+0.1
50,362	+			-0.6
50,362	+			-1.3
50,362	+			-0.9
50,362	+			-1.4
50,362	+			-2.1
50,363	-			-0.6
50,363	-			-0.7
50,363	-			-0.1
50,363	-			-0.9
50,363	-			-1.3
50,389	+			-2.3
50,389	+			-1.0
50,389	+			-0.6
50,389	+			-0.0
50,389	+			-0.1
50,389	+			-1.1
50,389	+			-0.3
50,390	-			+1.3
50,390	-			-0.6
50,390	-			-0.7
50,390	-			-1.7
50,465	+			-1.4
50,465	+			-0.5
50,477	-			+0.7
50,769	+			-0.0
50,769	+			-3.0
50,769	+			+1.3
50,769	+			-1.6
50,769	+			-0.0
50,769	+			-0.4
50,769	+			+0.2
50,769	+			+0.1
50,769	+			+1.1
50,769	+			-0.5
50,769	+			-1.6
50,769	+			-0.7
50,769	+			+0.2
50,770	-			+0.5
50,770	-			+0.7
50,770	-			-0.3
50,770	-			-1.6
50,770	-			+0.1
50,770	-			+0.7
50,770	-			-2.3
50,770	-			-1.4
50,770	-			-1.1
50,770	-			-1.9
50,770	-			+0.5
50,770	-			-0.2
50,770	-			-0.1
50,770	-			+0.1
50,770	-			-0.3
50,770	-			-1.6
50,852	+			-0.4
50,852	+			-1.5
50,852	+			-1.6
50,852	+			+1.1
50,852	+			-1.7
50,852	+			-1.2
50,852	+			-1.1
50,852	+			-1.5
50,852	+			-0.4
50,852	+			-0.9
50,853	-			+0.5
50,853	-			-1.6
50,853	-			-2.5
50,853	-			-1.4
50,853	-			+0.2
50,853	-			-0.7
50,853	-			-0.9
50,853	-			-0.4
50,853	-			-0.6
50,853	-			-1.3
50,853	-			-0.7
50,853	-			-1.3
50,853	-			-0.6
50,853	-			-1.5
50,853	-			-3.5
50,853	-			+0.5
50,882	+			-1.9
50,882	+			-0.4
50,882	+			-0.5
50,882	+			-1.6
50,883	-			-1.5
50,883	-			-0.3
50,883	-			-0.9
50,883	-			-0.3
50,883	-			+0.2
50,883	-			+0.2
50,883	-			-0.5
51,104	+	MPMX19_06577	0.45	-0.7
51,104	+	MPMX19_06577	0.45	-0.9
51,104	+	MPMX19_06577	0.45	-0.9
51,104	+	MPMX19_06577	0.45	-0.7
51,104	+	MPMX19_06577	0.45	-1.2
51,104	+	MPMX19_06577	0.45	-0.6
51,104	+	MPMX19_06577	0.45	+0.9
51,104	+	MPMX19_06577	0.45	-1.6
51,104	+	MPMX19_06577	0.45	-1.1
51,104	+	MPMX19_06577	0.45	-0.9
51,104	+	MPMX19_06577	0.45	+0.6
51,104	+	MPMX19_06577	0.45	-0.4
51,104	+	MPMX19_06577	0.45	-0.5
51,104	+	MPMX19_06577	0.45	+0.8
51,104	+	MPMX19_06577	0.45	+0.1
51,104	+	MPMX19_06577	0.45	-0.6
51,104	+	MPMX19_06577	0.45	-0.2
51,104	+	MPMX19_06577	0.45	-0.3
51,104	+	MPMX19_06577	0.45	-0.1
51,104	+	MPMX19_06577	0.45	-1.6
51,104	+	MPMX19_06577	0.45	-0.5
51,104	+	MPMX19_06577	0.45	-2.6
51,104	+	MPMX19_06577	0.45	-0.1
51,104	+	MPMX19_06577	0.45	+1.1
51,105	-	MPMX19_06577	0.45	-0.9
51,105	-	MPMX19_06577	0.45	+0.5
51,105	-	MPMX19_06577	0.45	+0.2
51,105	-	MPMX19_06577	0.45	-0.5
51,105	-	MPMX19_06577	0.45	+0.2
51,105	-	MPMX19_06577	0.45	+1.4
51,105	-	MPMX19_06577	0.45	-0.9
51,105	-	MPMX19_06577	0.45	-1.5
51,105	-	MPMX19_06577	0.45	-2.3
51,105	-	MPMX19_06577	0.45	-2.4
51,105	-	MPMX19_06577	0.45	-1.7
51,105	-	MPMX19_06577	0.45	-1.3
51,105	-	MPMX19_06577	0.45	-1.3
51,105	-	MPMX19_06577	0.45	+1.5
51,105	-	MPMX19_06577	0.45	+0.4
51,105	-	MPMX19_06577	0.45	-2.0
51,105	-	MPMX19_06577	0.45	-1.3
51,105	-	MPMX19_06577	0.45	+0.1
51,105	-	MPMX19_06577	0.45	-0.8
51,105	-	MPMX19_06577	0.45	-1.5
51,251	+	MPMX19_06577	0.71	-1.6
51,251	+	MPMX19_06577	0.71	+0.1
51,251	+	MPMX19_06577	0.71	-1.3
51,251	+	MPMX19_06577	0.71	-1.3
51,251	+	MPMX19_06577	0.71	-0.6
51,251	+	MPMX19_06577	0.71	-2.5
51,251	+	MPMX19_06577	0.71	-1.6
51,251	+	MPMX19_06577	0.71	-0.7
51,251	+	MPMX19_06577	0.71	-0.6
51,251	+	MPMX19_06577	0.71	-1.0
51,251	+	MPMX19_06577	0.71	-1.4
51,251	+	MPMX19_06577	0.71	+0.2
51,251	+	MPMX19_06577	0.71	-0.8
51,251	+	MPMX19_06577	0.71	-0.1
51,251	+	MPMX19_06577	0.71	+1.1
51,251	+	MPMX19_06577	0.71	-0.5
51,251	+	MPMX19_06577	0.71	-2.0
51,251	+	MPMX19_06577	0.71	+0.7
51,251	+	MPMX19_06577	0.71	+0.9
51,251	+	MPMX19_06577	0.71	-0.7
51,251	+	MPMX19_06577	0.71	-1.1
51,251	+	MPMX19_06577	0.71	-0.0
51,251	+	MPMX19_06577	0.71	-1.9
51,251	+	MPMX19_06577	0.71	-0.6
51,252	-	MPMX19_06577	0.71	-1.9
51,252	-	MPMX19_06577	0.71	-1.3
51,252	-	MPMX19_06577	0.71	-1.6
51,252	-	MPMX19_06577	0.71	-1.4
51,252	-	MPMX19_06577	0.71	-0.3
51,252	-	MPMX19_06577	0.71	-3.4
51,252	-	MPMX19_06577	0.71	-2.1
51,252	-	MPMX19_06577	0.71	-0.1
51,252	-	MPMX19_06577	0.71	+0.4
51,252	-	MPMX19_06577	0.71	-1.4
51,252	-	MPMX19_06577	0.71	-1.9
51,252	-	MPMX19_06577	0.71	-2.8
51,252	-	MPMX19_06577	0.71	-0.1
51,252	-	MPMX19_06577	0.71	+0.5
51,252	-	MPMX19_06577	0.71	-0.4
51,252	-	MPMX19_06577	0.71	-0.5
51,252	-	MPMX19_06577	0.71	-1.4
51,252	-	MPMX19_06577	0.71	+0.3
51,252	-	MPMX19_06577	0.71	-2.0
51,252	-	MPMX19_06577	0.71	-0.9
51,252	-	MPMX19_06577	0.71	-0.9
51,252	-	MPMX19_06577	0.71	-1.0
51,305	+	MPMX19_06577	0.80	-2.8
51,305	+	MPMX19_06577	0.80	-0.7
51,306	-	MPMX19_06577	0.81	-0.5
51,496	+			-0.4
51,496	+			-1.5
51,496	+			+1.5
51,496	+			-1.5
51,496	+			+0.3
51,496	+			-1.9
51,496	+			-0.3
51,496	+			-0.0
51,496	+			+0.7
51,497	-			-0.5
51,497	-			-2.1
51,497	-			+0.3
51,497	-			-0.5
51,497	-			-0.9
51,604	+	MPMX19_06578	0.19	-0.3
51,604	+	MPMX19_06578	0.19	+0.1
51,604	+	MPMX19_06578	0.19	+0.7
51,605	-	MPMX19_06578	0.19	-1.3
51,605	-	MPMX19_06578	0.19	-1.6
51,605	-	MPMX19_06578	0.19	-1.0
51,605	-	MPMX19_06578	0.19	-1.0
51,605	-	MPMX19_06578	0.19	-1.2
51,739	+	MPMX19_06578	0.32	-1.6
51,739	+	MPMX19_06578	0.32	+0.3
51,739	+	MPMX19_06578	0.32	-1.4
51,739	+	MPMX19_06578	0.32	-0.0
51,740	-	MPMX19_06578	0.32	-1.4
51,740	-	MPMX19_06578	0.32	-1.8
51,740	-	MPMX19_06578	0.32	-3.0
51,740	-	MPMX19_06578	0.32	-0.1
51,740	-	MPMX19_06578	0.32	-0.8
51,740	-	MPMX19_06578	0.32	-0.8
51,740	-	MPMX19_06578	0.32	-1.6
51,740	-	MPMX19_06578	0.32	-2.0
51,754	+	MPMX19_06578	0.34	-0.8
51,754	+	MPMX19_06578	0.34	+0.5
51,754	+	MPMX19_06578	0.34	+1.0
51,754	+	MPMX19_06578	0.34	-0.8
51,754	+	MPMX19_06578	0.34	-1.4
51,754	+	MPMX19_06578	0.34	-0.1
51,754	+	MPMX19_06578	0.34	-1.2
51,754	+	MPMX19_06578	0.34	-0.7
51,754	+	MPMX19_06578	0.34	+1.1
51,754	+	MPMX19_06578	0.34	-0.0
51,755	-	MPMX19_06578	0.34	+0.1
51,755	-	MPMX19_06578	0.34	-1.1
51,755	-	MPMX19_06578	0.34	-0.7
51,755	-	MPMX19_06578	0.34	-2.6
51,784	+	MPMX19_06578	0.37	-2.3
51,784	+	MPMX19_06578	0.37	-1.1
51,784	+	MPMX19_06578	0.37	-2.3
51,784	+	MPMX19_06578	0.37	-1.6
51,785	-	MPMX19_06578	0.37	-2.4
51,785	-	MPMX19_06578	0.37	+0.1
51,785	-	MPMX19_06578	0.37	-0.4
51,785	-	MPMX19_06578	0.37	-0.5
52,084	+	MPMX19_06578	0.66	-1.2
52,084	+	MPMX19_06578	0.66	-1.3
52,085	-	MPMX19_06578	0.66	-0.5
52,306	+	MPMX19_06578	0.88	-0.7
52,306	+	MPMX19_06578	0.88	-1.1
52,306	+	MPMX19_06578	0.88	-1.3
52,306	+	MPMX19_06578	0.88	-1.9
52,306	+	MPMX19_06578	0.88	-0.9
52,306	+	MPMX19_06578	0.88	+0.3
52,306	+	MPMX19_06578	0.88	-0.4
52,306	+	MPMX19_06578	0.88	-1.4
52,306	+	MPMX19_06578	0.88	-0.4
52,306	+	MPMX19_06578	0.88	-2.2
52,306	+	MPMX19_06578	0.88	-0.5
52,306	+	MPMX19_06578	0.88	-0.7
52,306	+	MPMX19_06578	0.88	-0.6
52,306	+	MPMX19_06578	0.88	-0.7
52,306	+	MPMX19_06578	0.88	-0.8
52,307	-	MPMX19_06578	0.88	+0.5
52,307	-	MPMX19_06578	0.88	+0.1
52,307	-	MPMX19_06578	0.88	+0.5
52,307	-	MPMX19_06578	0.88	+0.3
52,307	-	MPMX19_06578	0.88	-1.2
52,307	-	MPMX19_06578	0.88	+0.2
52,307	-	MPMX19_06578	0.88	-1.8
52,307	-	MPMX19_06578	0.88	+0.3
52,373	+			-1.0
52,373	+			-0.4
52,374	-			-0.5

Or see this region's nucleotide sequence