Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06397

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
160,702	+		MPMX19_06395	0.14	+0.5
160,703	-		MPMX19_06395	0.15	-0.6
160,830	+		MPMX19_06395	0.44	+0.1
160,830	+		MPMX19_06395	0.44	-0.3
160,831	-		MPMX19_06395	0.45	+0.7
160,831	-		MPMX19_06395	0.45	-0.1
160,831	-		MPMX19_06395	0.45	-0.7
160,847	+		MPMX19_06395	0.48	-1.8
160,902	+		MPMX19_06395	0.61	-0.4
161,040	+				-1.3
161,041	-				+0.1
161,041	-				-2.3
161,064	+				-0.4
161,064	+				+0.1
161,064	+				-2.1
161,064	+				-0.6
161,064	+				-0.7
161,064	+				+0.7
161,064	+				-0.7
161,064	+				-1.4
161,065	-				-1.3
161,065	-				-0.7
161,065	-				-0.1
161,065	-				-1.2
161,065	-				-0.1
161,203	+		MPMX19_06396	0.22	-0.6
161,203	+		MPMX19_06396	0.22	-0.2
161,203	+		MPMX19_06396	0.22	-1.2
161,203	+		MPMX19_06396	0.22	+0.7
161,203	+		MPMX19_06396	0.22	-2.0
161,203	+		MPMX19_06396	0.22	-0.7
161,204	-		MPMX19_06396	0.22	-0.3
161,204	-		MPMX19_06396	0.22	+0.9
161,204	-		MPMX19_06396	0.22	+0.3
161,204	-		MPMX19_06396	0.22	+1.3
161,403	+		MPMX19_06396	0.64	-0.8
161,404	-		MPMX19_06396	0.65	-0.4
161,404	-		MPMX19_06396	0.65	-0.9
161,455	+		MPMX19_06396	0.75	+0.6
161,455	+		MPMX19_06396	0.75	-1.1
161,455	+		MPMX19_06396	0.75	+0.7
161,455	+		MPMX19_06396	0.75	-0.7
161,455	+		MPMX19_06396	0.75	+0.4
161,456	-		MPMX19_06396	0.76	-1.2
161,456	-		MPMX19_06396	0.76	+1.3
161,456	-		MPMX19_06396	0.76	-0.6
161,456	-		MPMX19_06396	0.76	+0.3
161,456	-		MPMX19_06396	0.76	-0.6
161,456	-		MPMX19_06396	0.76	-0.9
161,456	-		MPMX19_06396	0.76	+0.8
161,456	-		MPMX19_06396	0.76	+0.3
161,456	-		MPMX19_06396	0.76	-0.6
161,456	-		MPMX19_06396	0.76	-1.8
161,456	-		MPMX19_06396	0.76	-0.1
161,456	-		MPMX19_06396	0.76	-1.1
161,729	+		MPMX19_06397	0.18	-1.2
161,730	-		MPMX19_06397	0.18	+0.3
161,810	+		MPMX19_06397	0.29	+0.7
161,825	+		MPMX19_06397	0.31	-2.0
161,825	+		MPMX19_06397	0.31	-0.2
161,825	+		MPMX19_06397	0.31	+0.1
161,907	-		MPMX19_06397	0.42	+0.4
161,907	-		MPMX19_06397	0.42	-0.6
161,907	-		MPMX19_06397	0.42	-0.8
161,996	+		MPMX19_06397	0.53	+1.7
161,996	+		MPMX19_06397	0.53	-1.1
161,996	+		MPMX19_06397	0.53	-0.6
161,996	+		MPMX19_06397	0.53	+0.6
161,997	-		MPMX19_06397	0.53	+1.1
161,997	-		MPMX19_06397	0.53	+0.0
161,997	-		MPMX19_06397	0.53	-1.0
161,997	-		MPMX19_06397	0.53	-1.7
161,997	-		MPMX19_06397	0.53	-0.3
161,997	-		MPMX19_06397	0.53	+0.8
161,997	-		MPMX19_06397	0.53	-0.2
161,997	-		MPMX19_06397	0.53	+0.7
162,089	+		MPMX19_06397	0.65	-0.9
162,089	+		MPMX19_06397	0.65	+0.1
162,089	+		MPMX19_06397	0.65	-0.7
162,089	+		MPMX19_06397	0.65	-0.1
162,089	+		MPMX19_06397	0.65	-1.7
162,089	+		MPMX19_06397	0.65	+0.3
162,089	+		MPMX19_06397	0.65	-0.7
162,089	+		MPMX19_06397	0.65	-0.6
162,089	+		MPMX19_06397	0.65	-0.4
162,090	-		MPMX19_06397	0.65	-0.9
162,090	-		MPMX19_06397	0.65	-1.7
162,090	-		MPMX19_06397	0.65	-1.4
162,090	-		MPMX19_06397	0.65	-0.7
162,090	-		MPMX19_06397	0.65	-0.5
162,090	-		MPMX19_06397	0.65	+1.3
162,090	-		MPMX19_06397	0.65	-1.4
162,090	-		MPMX19_06397	0.65	-1.1
162,090	-		MPMX19_06397	0.65	-0.6
162,090	-		MPMX19_06397	0.65	-0.2
162,090	-		MPMX19_06397	0.65	-1.2
162,090	-		MPMX19_06397	0.65	-2.4
162,101	+		MPMX19_06397	0.67	-2.1
162,101	+		MPMX19_06397	0.67	+0.9
162,101	+		MPMX19_06397	0.67	-0.2
162,101	+		MPMX19_06397	0.67	-0.2
162,101	+		MPMX19_06397	0.67	-0.2
162,101	+		MPMX19_06397	0.67	-0.1
162,101	+		MPMX19_06397	0.67	+0.1
162,102	-		MPMX19_06397	0.67	-1.0
162,102	-		MPMX19_06397	0.67	-0.7
162,102	-		MPMX19_06397	0.67	+0.5
162,102	-		MPMX19_06397	0.67	-0.5
162,102	-		MPMX19_06397	0.67	-1.1
162,102	-		MPMX19_06397	0.67	-1.1
162,102	-		MPMX19_06397	0.67	+0.3
162,290	+				-0.2
162,290	+				-1.2
162,290	+				-0.8
162,291	-				-1.6
162,291	-				-1.1
162,291	-				-0.1
162,291	-				-0.6
162,291	-				-0.4
162,291	-				+0.1
162,302	+				+0.6
162,303	-				-1.1
162,303	-				+1.3
162,303	-				-1.5
162,303	-				+0.4
162,333	+				-0.7
162,333	+				-2.5
162,334	-				-1.4
162,343	+				-0.1
162,343	+				-0.2
162,343	+				+0.3
162,344	-				-1.3
162,344	-				-2.7
162,344	-				-1.3
162,344	-				-0.8
162,344	-				-0.1
162,369	+				-0.6
162,369	+				-2.2
162,369	+				+0.5
162,369	+				+0.9
162,369	+				-0.7
162,369	+				-0.3
162,369	+				-1.3
162,369	+				+0.4
162,369	+				-0.3
162,369	+				-0.2
162,370	-				+1.8
162,370	-				-1.2
162,370	-				-1.2
162,370	-				-0.2
162,370	-				+0.0
162,370	-				+2.3
162,386	+				+2.3
162,387	-				-1.6
162,387	-				-1.3
162,432	+				-1.1
162,432	+				-0.8
162,433	-				-1.8
162,433	-				-0.7
162,433	-				-1.0
162,433	-				+0.7
162,433	-				-0.8
162,540	+				-1.4
162,540	+				-0.1
162,540	+				-0.6
162,540	+				-0.9
162,540	+				-0.7
162,540	+				-0.1
162,540	+				-1.6
162,540	+				-0.3
162,540	+				+0.4
162,540	+				+0.3
162,541	-				-0.9
162,541	-				-1.7
162,541	-				-1.5
162,541	-				-0.6
162,541	-				-0.3
162,541	-				-0.4
162,541	-				-0.3
162,541	-				-0.6
162,579	+				-2.3
162,579	+				-0.6
162,579	+				-1.4
162,580	-				-2.0
162,580	-				-0.1
162,580	-				-0.1
162,580	-				+1.0
162,580	-				-0.4
162,580	-				-2.1
162,580	-				-0.7
163,091	+		MPMX19_06398	0.28	-0.9
163,092	-		MPMX19_06398	0.28	-1.1
163,306	+		MPMX19_06398	0.36	+0.9