Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06320

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
79,375	+		MPMX19_06318	0.54	-0.6
79,375	+		MPMX19_06318	0.54	+0.3
79,375	+		MPMX19_06318	0.54	-2.1
79,376	-		MPMX19_06318	0.54	-0.1
79,376	-		MPMX19_06318	0.54	-0.1
79,376	-		MPMX19_06318	0.54	-1.7
79,376	-		MPMX19_06318	0.54	-1.0
79,540	+		MPMX19_06318	0.77	+0.7
79,540	+		MPMX19_06318	0.77	-0.9
79,541	-		MPMX19_06318	0.77	-0.1
79,552	+		MPMX19_06318	0.79	+0.3
79,552	+		MPMX19_06318	0.79	+1.3
79,552	+		MPMX19_06318	0.79	+0.3
79,552	+		MPMX19_06318	0.79	-0.6
79,552	+		MPMX19_06318	0.79	-1.2
79,552	+		MPMX19_06318	0.79	-2.1
79,553	-		MPMX19_06318	0.79	-0.8
79,553	-		MPMX19_06318	0.79	-0.1
79,600	+		MPMX19_06318	0.86	-0.8
79,600	+		MPMX19_06318	0.86	+1.4
79,600	+		MPMX19_06318	0.86	-0.5
79,600	+		MPMX19_06318	0.86	-1.7
79,600	+		MPMX19_06318	0.86	+0.1
79,600	+		MPMX19_06318	0.86	-1.7
79,600	+		MPMX19_06318	0.86	-1.9
79,600	+		MPMX19_06318	0.86	-0.2
79,600	+		MPMX19_06318	0.86	-1.7
79,600	+		MPMX19_06318	0.86	+1.9
79,601	-		MPMX19_06318	0.86	-1.6
79,601	-		MPMX19_06318	0.86	-0.7
79,601	-		MPMX19_06318	0.86	-0.6
79,686	+				+1.3
79,687	-				-0.1
79,774	+				-0.9
79,774	+				-0.7
79,975	+				-0.4
79,975	+				+0.8
79,976	-				+0.7
79,976	-				-0.4
80,213	+				-1.3
80,214	-				-0.6
80,214	-				-0.3
80,257	+				-1.4
80,258	-				+1.4
80,298	+				-1.2
80,298	+				+0.3
80,298	+				+1.8
80,298	+				+0.1
80,298	+				-0.6
80,298	+				-2.4
80,299	-				-1.8
80,299	-				-0.2
80,299	-				-0.1
80,299	-				-1.5
80,299	-				+1.0
80,299	-				-0.6
80,299	-				+0.3
80,299	-				+0.4
80,299	-				+0.4
80,523	+		MPMX19_06320	0.26	-1.7
80,524	-		MPMX19_06320	0.26	-0.7
80,524	-		MPMX19_06320	0.26	-2.1
80,524	-		MPMX19_06320	0.26	+0.0
80,560	+		MPMX19_06320	0.30	-0.7
80,561	-		MPMX19_06320	0.30	-1.4
80,561	-		MPMX19_06320	0.30	-1.2
80,762	+		MPMX19_06320	0.54	-0.2
80,763	-		MPMX19_06320	0.54	+0.1
80,763	-		MPMX19_06320	0.54	-0.3
80,763	-		MPMX19_06320	0.54	-1.0
80,776	+		MPMX19_06320	0.55	-1.2
80,776	+		MPMX19_06320	0.55	-1.7
80,776	+		MPMX19_06320	0.55	-0.3
80,776	+		MPMX19_06320	0.55	-0.2
80,776	+		MPMX19_06320	0.55	-2.2
81,167	+				-2.0
81,180	+				+0.1
81,180	+				-0.9
81,180	+				-2.6
81,180	+				-0.5
81,181	-				-0.8
81,181	-				+0.4
81,181	-				+0.4
81,181	-				-0.1
81,183	+				-1.8
81,183	+				+0.1
81,184	-				-0.6
81,280	+				+1.0
81,280	+				-0.6
81,280	+				-0.6
81,280	+				+0.1
81,280	+				+0.1
81,280	+				-0.6
81,280	+				-0.5
81,281	-				+1.1
81,281	-				-0.9
81,281	-				-0.2
81,281	-				-1.6
81,281	-				-1.1
81,281	-				-0.3
81,281	-				-0.3
81,281	-				-1.0
81,281	-				-1.2
81,281	-				+0.3
81,359	+				+0.1
81,359	+				-2.1
81,360	-				+0.4
81,360	-				-1.1
81,360	-				+0.6
81,360	-				-0.3
81,360	-				-0.9
81,360	-				+0.3
81,369	+				-1.0
81,369	+				+0.3
81,369	+				-1.2
81,369	+				-0.1
81,370	-				-0.1
81,370	-				-0.9
81,370	-				+0.1
81,370	-				-1.1
81,370	-				-0.1
81,370	-				+0.1
81,370	-				-1.0
81,540	+		MPMX19_06321	0.22	-0.7
81,541	-		MPMX19_06321	0.22	-1.3
81,541	-		MPMX19_06321	0.22	+0.9
82,134	+		MPMX19_06321	0.74	+0.4
82,134	+		MPMX19_06321	0.74	-1.6
82,134	+		MPMX19_06321	0.74	+1.0
82,134	+		MPMX19_06321	0.74	-1.1
82,134	+		MPMX19_06321	0.74	-1.7
82,134	+		MPMX19_06321	0.74	+0.7
82,135	-		MPMX19_06321	0.74	-0.5
82,135	-		MPMX19_06321	0.74	-0.4
82,135	-		MPMX19_06321	0.74	-2.1
82,135	-		MPMX19_06321	0.74	+0.3
82,135	-		MPMX19_06321	0.74	-1.2
82,142	+		MPMX19_06321	0.74	-0.6