Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06265 and MPMX19_06266 are separated by 130 nucleotides MPMX19_06266 and MPMX19_06267 are separated by 433 nucleotides
MPMX19_06265: MPMX19_06265 - hypothetical protein, at 16,571 to 17,194
_06265
MPMX19_06266: MPMX19_06266 - hypothetical protein, at 17,325 to 17,687
_06266
MPMX19_06267: MPMX19_06267 - hypothetical protein, at 18,121 to 18,384
_06267
Position (kb) 16
17
18 Strain fitness (log2 ratio) -2
-1
0
1
2 at 15.692 kb on + strand at 15.692 kb on + strand at 15.692 kb on + strand at 15.693 kb on - strand at 15.793 kb on + strand at 15.793 kb on + strand at 15.793 kb on + strand at 15.793 kb on + strand at 15.892 kb on + strand at 15.892 kb on + strand at 16.037 kb on + strand at 16.037 kb on + strand at 16.037 kb on + strand at 16.037 kb on + strand at 16.037 kb on + strand at 16.037 kb on + strand at 16.038 kb on - strand at 16.038 kb on - strand at 16.038 kb on - strand at 16.038 kb on - strand at 16.244 kb on + strand at 16.244 kb on + strand at 16.244 kb on + strand at 16.244 kb on + strand at 16.245 kb on - strand at 16.245 kb on - strand at 16.245 kb on - strand at 16.245 kb on - strand at 16.245 kb on - strand at 16.245 kb on - strand at 16.245 kb on - strand at 16.245 kb on - strand at 17.412 kb on + strand, within MPMX19_06266 at 17.413 kb on - strand, within MPMX19_06266 at 17.413 kb on - strand, within MPMX19_06266 at 17.567 kb on + strand, within MPMX19_06266 at 17.921 kb on + strand at 17.922 kb on - strand at 17.922 kb on - strand at 17.995 kb on + strand at 18.003 kb on + strand at 18.003 kb on + strand at 18.003 kb on + strand at 18.003 kb on + strand at 18.004 kb on - strand at 18.004 kb on - strand at 18.004 kb on - strand at 18.004 kb on - strand at 18.004 kb on - strand at 18.004 kb on - strand at 18.041 kb on + strand at 18.041 kb on + strand at 18.041 kb on + strand at 18.041 kb on + strand at 18.041 kb on + strand at 18.041 kb on + strand at 18.042 kb on - strand at 18.042 kb on - strand at 18.042 kb on - strand at 18.042 kb on - strand at 18.042 kb on - strand at 18.058 kb on - strand at 18.123 kb on - strand at 18.132 kb on + strand at 18.132 kb on + strand at 18.132 kb on + strand at 18.133 kb on - strand at 18.133 kb on - strand at 18.133 kb on - strand at 18.133 kb on - strand at 18.133 kb on - strand at 18.139 kb on - strand at 18.139 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 15,692 + -0.7 15,692 + +1.4 15,692 + -0.6 15,693 - +0.6 15,793 + +1.0 15,793 + +0.4 15,793 + -1.3 15,793 + +1.1 15,892 + +1.8 15,892 + -1.7 16,037 + +0.4 16,037 + -1.7 16,037 + +0.6 16,037 + +0.3 16,037 + +0.1 16,037 + -0.7 16,038 - +0.8 16,038 - -0.6 16,038 - +0.5 16,038 - +0.1 16,244 + +0.4 16,244 + -0.3 16,244 + +0.5 16,244 + -0.6 16,245 - -0.1 16,245 - -1.0 16,245 - -0.6 16,245 - +0.3 16,245 - -1.3 16,245 - +0.4 16,245 - +0.3 16,245 - +0.3 17,412 + MPMX19_06266 0.24 +0.0 17,413 - MPMX19_06266 0.24 -0.9 17,413 - MPMX19_06266 0.24 +0.4 17,567 + MPMX19_06266 0.67 -1.2 17,921 + -1.0 17,922 - -0.2 17,922 - -0.1 17,995 + -0.6 18,003 + -0.9 18,003 + -1.3 18,003 + -0.3 18,003 + +1.3 18,004 - -0.6 18,004 - -0.7 18,004 - -1.7 18,004 - -0.3 18,004 - -0.2 18,004 - +0.1 18,041 + +0.3 18,041 + -0.4 18,041 + +0.0 18,041 + -0.3 18,041 + -0.0 18,041 + -0.7 18,042 - -1.0 18,042 - -1.1 18,042 - +0.4 18,042 - -0.5 18,042 - +1.4 18,058 - +0.4 18,123 - +0.7 18,132 + -0.4 18,132 + +0.3 18,132 + -1.2 18,133 - -0.4 18,133 - -0.3 18,133 - -0.9 18,133 - -2.0 18,133 - +1.1 18,139 - +0.1 18,139 - -2.1
Or see this region's nucleotide sequence