Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05983

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
137,606	+		MPMX19_05982	0.42	-0.6
137,606	+		MPMX19_05982	0.42	+0.6
137,606	+		MPMX19_05982	0.42	-0.7
137,607	-		MPMX19_05982	0.42	-1.3
137,607	-		MPMX19_05982	0.42	-1.1
137,607	-		MPMX19_05982	0.42	-0.8
137,696	+		MPMX19_05982	0.52	-0.6
137,777	+		MPMX19_05982	0.62	+0.7
138,082	-				-0.8
138,183	+				-1.2
138,527	+		MPMX19_05983	0.25	-0.8
138,527	+		MPMX19_05983	0.25	+0.5
138,527	+		MPMX19_05983	0.25	-0.1
138,527	+		MPMX19_05983	0.25	-3.0
138,527	+		MPMX19_05983	0.25	-1.1
138,527	+		MPMX19_05983	0.25	-0.2
138,527	+		MPMX19_05983	0.25	+1.6
138,527	+		MPMX19_05983	0.25	+0.3
138,527	+		MPMX19_05983	0.25	-0.1
138,527	+		MPMX19_05983	0.25	-1.0
138,527	+		MPMX19_05983	0.25	+1.2
138,527	+		MPMX19_05983	0.25	-0.1
138,527	+		MPMX19_05983	0.25	-0.2
138,527	+		MPMX19_05983	0.25	-0.9
138,527	+		MPMX19_05983	0.25	-0.9
138,527	+		MPMX19_05983	0.25	-1.2
138,527	+		MPMX19_05983	0.25	+0.2
138,527	+		MPMX19_05983	0.25	-0.2
138,527	+		MPMX19_05983	0.25	-1.4
138,527	+		MPMX19_05983	0.25	-1.0
138,527	+		MPMX19_05983	0.25	+0.2
138,527	+		MPMX19_05983	0.25	+0.4
138,527	+		MPMX19_05983	0.25	-0.5
138,528	-		MPMX19_05983	0.25	-0.7
138,528	-		MPMX19_05983	0.25	-0.6
138,528	-		MPMX19_05983	0.25	+0.4
138,528	-		MPMX19_05983	0.25	-0.5
138,528	-		MPMX19_05983	0.25	-1.3
138,528	-		MPMX19_05983	0.25	-0.8
138,528	-		MPMX19_05983	0.25	-0.6
138,528	-		MPMX19_05983	0.25	-1.5
138,528	-		MPMX19_05983	0.25	-1.2
138,528	-		MPMX19_05983	0.25	+0.9
138,528	-		MPMX19_05983	0.25	+0.6
138,528	-		MPMX19_05983	0.25	-1.0
138,528	-		MPMX19_05983	0.25	-0.1
138,528	-		MPMX19_05983	0.25	-0.3
138,528	-		MPMX19_05983	0.25	+0.5
138,528	-		MPMX19_05983	0.25	-0.4
138,528	-		MPMX19_05983	0.25	-0.2
138,528	-		MPMX19_05983	0.25	-0.3
138,528	-		MPMX19_05983	0.25	-0.0
138,708	-		MPMX19_05983	0.40	+1.0
138,708	-		MPMX19_05983	0.40	-0.2
138,708	-		MPMX19_05983	0.40	-0.1
138,732	-		MPMX19_05983	0.42	-0.6
138,768	-		MPMX19_05983	0.46	+0.4
138,768	-		MPMX19_05983	0.46	+0.4
138,768	-		MPMX19_05983	0.46	-0.1
138,768	-		MPMX19_05983	0.46	-0.4
138,768	-		MPMX19_05983	0.46	+0.8
138,768	-		MPMX19_05983	0.46	-1.0
138,768	-		MPMX19_05983	0.46	-0.6
138,768	-		MPMX19_05983	0.46	-1.4
138,768	-		MPMX19_05983	0.46	-0.0
138,836	+		MPMX19_05983	0.51	-0.7
138,836	+		MPMX19_05983	0.51	+1.2
138,836	+		MPMX19_05983	0.51	-0.2
138,836	+		MPMX19_05983	0.51	+0.0
138,837	-		MPMX19_05983	0.52	-0.5
138,837	-		MPMX19_05983	0.52	-0.5
138,860	+		MPMX19_05983	0.53	-1.4
138,860	+		MPMX19_05983	0.53	-1.5
138,860	+		MPMX19_05983	0.53	-1.2
138,860	+		MPMX19_05983	0.53	-0.4
138,860	+		MPMX19_05983	0.53	-0.8
138,860	+		MPMX19_05983	0.53	-1.0
138,860	+		MPMX19_05983	0.53	-1.9
138,860	+		MPMX19_05983	0.53	+0.9
138,861	-		MPMX19_05983	0.54	+0.6
138,861	-		MPMX19_05983	0.54	+0.0
138,983	+		MPMX19_05983	0.64	-0.5
138,983	+		MPMX19_05983	0.64	+0.6
138,983	+		MPMX19_05983	0.64	-0.1
138,983	+		MPMX19_05983	0.64	-0.1
138,983	+		MPMX19_05983	0.64	+2.2
138,983	+		MPMX19_05983	0.64	+0.2
138,983	+		MPMX19_05983	0.64	+0.6
138,983	+		MPMX19_05983	0.64	+0.5
138,983	+		MPMX19_05983	0.64	+1.7
138,984	-		MPMX19_05983	0.64	-0.2
138,984	-		MPMX19_05983	0.64	+0.3
138,984	-		MPMX19_05983	0.64	-1.7
138,984	-		MPMX19_05983	0.64	+0.9
138,984	-		MPMX19_05983	0.64	+1.2
139,097	+		MPMX19_05983	0.74	+1.0
139,097	+		MPMX19_05983	0.74	+1.3
139,097	+		MPMX19_05983	0.74	-0.8
139,097	+		MPMX19_05983	0.74	-1.4
139,097	+		MPMX19_05983	0.74	+0.2
139,097	+		MPMX19_05983	0.74	-1.4
139,097	+		MPMX19_05983	0.74	+0.8
139,098	-		MPMX19_05983	0.74	-0.0
139,098	-		MPMX19_05983	0.74	+1.1
139,098	-		MPMX19_05983	0.74	-1.1
139,098	-		MPMX19_05983	0.74	-0.7
139,098	-		MPMX19_05983	0.74	-0.6
139,151	+		MPMX19_05983	0.79	-0.4
139,151	+		MPMX19_05983	0.79	+0.4
139,151	+		MPMX19_05983	0.79	-0.1
139,151	+		MPMX19_05983	0.79	-0.7
139,151	+		MPMX19_05983	0.79	+1.4
139,151	+		MPMX19_05983	0.79	-1.7
139,151	+		MPMX19_05983	0.79	+2.6
139,151	+		MPMX19_05983	0.79	-2.1
139,151	+		MPMX19_05983	0.79	-1.1
139,151	+		MPMX19_05983	0.79	-0.2
139,151	+		MPMX19_05983	0.79	-0.8
139,152	-		MPMX19_05983	0.79	+1.2
139,152	-		MPMX19_05983	0.79	-1.4
139,152	-		MPMX19_05983	0.79	-0.1
139,152	-		MPMX19_05983	0.79	-1.0
139,152	-		MPMX19_05983	0.79	-0.4
139,152	-		MPMX19_05983	0.79	-1.2
139,152	-		MPMX19_05983	0.79	+1.2
139,152	-		MPMX19_05983	0.79	-1.1
139,152	-		MPMX19_05983	0.79	-0.9
139,152	-		MPMX19_05983	0.79	-0.6
139,152	-		MPMX19_05983	0.79	+0.2
139,152	-		MPMX19_05983	0.79	-0.6
139,152	-		MPMX19_05983	0.79	-0.1
139,152	-		MPMX19_05983	0.79	-1.7
139,152	-		MPMX19_05983	0.79	-0.8
139,152	-		MPMX19_05983	0.79	-0.2
139,152	-		MPMX19_05983	0.79	-0.1
139,152	-		MPMX19_05983	0.79	+0.8
139,152	-		MPMX19_05983	0.79	+0.1
139,152	-		MPMX19_05983	0.79	-1.2
139,152	-		MPMX19_05983	0.79	-0.6
139,199	+		MPMX19_05983	0.83	-0.9
139,199	+		MPMX19_05983	0.83	+0.7
139,199	+		MPMX19_05983	0.83	+0.2
139,199	+		MPMX19_05983	0.83	-1.2
139,199	+		MPMX19_05983	0.83	-1.5
139,200	-		MPMX19_05983	0.83	-0.2
139,200	-		MPMX19_05983	0.83	-1.0
139,200	-		MPMX19_05983	0.83	-1.1
139,200	-		MPMX19_05983	0.83	-1.3
139,200	-		MPMX19_05983	0.83	-0.4
139,200	-		MPMX19_05983	0.83	+1.0
139,200	-		MPMX19_05983	0.83	+0.0
139,200	-		MPMX19_05983	0.83	-1.0
139,200	-		MPMX19_05983	0.83	+0.2
139,200	-		MPMX19_05983	0.83	+0.0
139,208	+		MPMX19_05983	0.83	-0.1
139,208	+		MPMX19_05983	0.83	-0.2
139,208	+		MPMX19_05983	0.83	-0.5
139,209	-		MPMX19_05983	0.84	+1.2
139,209	-		MPMX19_05983	0.84	-1.2
139,209	-		MPMX19_05983	0.84	-0.9
139,209	-		MPMX19_05983	0.84	+0.2
139,209	-		MPMX19_05983	0.84	-0.9
139,209	-		MPMX19_05983	0.84	-0.2
139,209	-		MPMX19_05983	0.84	-0.1
139,209	-		MPMX19_05983	0.84	-0.5
139,209	-		MPMX19_05983	0.84	-1.1
139,209	-		MPMX19_05983	0.84	+0.4
139,209	-		MPMX19_05983	0.84	-0.3
139,209	-		MPMX19_05983	0.84	+1.2
139,209	-		MPMX19_05983	0.84	+2.2
139,209	-		MPMX19_05983	0.84	-1.0
139,397	+				+1.5
139,397	+				-1.0
139,397	+				+0.8
139,398	-				-0.6
139,398	-				-0.8
139,668	+				-1.4
139,668	+				-1.1
139,668	+				-0.4
139,669	-				-0.6
139,669	-				-1.2
139,669	-				-1.4
139,712	+				+0.6
139,712	+				+0.7
139,713	-				+0.2
139,713	-				-0.4
139,713	-				+0.5
139,949	+		MPMX19_05985	0.29	+2.6
139,949	+		MPMX19_05985	0.29	-1.1
139,949	+		MPMX19_05985	0.29	-1.2
139,950	-		MPMX19_05985	0.29	-1.2
139,950	-		MPMX19_05985	0.29	-0.5
139,950	-		MPMX19_05985	0.29	-0.2
139,950	-		MPMX19_05985	0.29	-0.6
140,189	+		MPMX19_05985	0.72	-0.1
140,189	+		MPMX19_05985	0.72	-0.5
140,189	+		MPMX19_05985	0.72	-0.3
140,189	+		MPMX19_05985	0.72	-1.2
140,189	+		MPMX19_05985	0.72	+0.6
140,189	+		MPMX19_05985	0.72	-0.5
140,189	+		MPMX19_05985	0.72	+1.2
140,189	+		MPMX19_05985	0.72	-0.4
140,189	+		MPMX19_05985	0.72	-1.5
140,189	+		MPMX19_05985	0.72	-1.0
140,189	+		MPMX19_05985	0.72	-0.6
140,189	+		MPMX19_05985	0.72	-0.8
140,189	+		MPMX19_05985	0.72	+0.6
140,189	+		MPMX19_05985	0.72	-0.4
140,189	+		MPMX19_05985	0.72	-1.1
140,189	+		MPMX19_05985	0.72	-1.0
140,189	+		MPMX19_05985	0.72	-0.6
140,189	+		MPMX19_05985	0.72	-0.4
140,190	-		MPMX19_05985	0.72	-0.7
140,190	-		MPMX19_05985	0.72	+0.6
140,190	-		MPMX19_05985	0.72	+0.6
140,190	-		MPMX19_05985	0.72	+0.8
140,190	-		MPMX19_05985	0.72	+0.4
140,190	-		MPMX19_05985	0.72	+0.1
140,190	-		MPMX19_05985	0.72	-0.8
140,190	-		MPMX19_05985	0.72	-0.4
140,190	-		MPMX19_05985	0.72	-0.2
140,190	-		MPMX19_05985	0.72	-1.0
140,190	-		MPMX19_05985	0.72	+2.1
140,190	-		MPMX19_05985	0.72	-0.5
140,190	-		MPMX19_05985	0.72	-0.2
140,190	-		MPMX19_05985	0.72	-0.5
140,190	-		MPMX19_05985	0.72	+0.1
140,190	-		MPMX19_05985	0.72	-0.5
140,225	+		MPMX19_05985	0.79	-1.8
140,225	+		MPMX19_05985	0.79	-1.0
140,225	+		MPMX19_05985	0.79	-0.4
140,225	+		MPMX19_05985	0.79	-0.0
140,225	+		MPMX19_05985	0.79	-0.6
140,225	+		MPMX19_05985	0.79	-0.5
140,225	+		MPMX19_05985	0.79	-0.2
140,225	+		MPMX19_05985	0.79	-0.6
140,225	+		MPMX19_05985	0.79	+0.2
140,225	+		MPMX19_05985	0.79	-0.6
140,225	+		MPMX19_05985	0.79	-1.1
140,225	+		MPMX19_05985	0.79	-1.4
140,225	+		MPMX19_05985	0.79	-0.7
140,225	+		MPMX19_05985	0.79	-0.8
140,225	+		MPMX19_05985	0.79	-0.4
140,226	-		MPMX19_05985	0.79	+0.3
140,226	-		MPMX19_05985	0.79	+0.6
140,226	-		MPMX19_05985	0.79	-1.1
140,226	-		MPMX19_05985	0.79	+0.0
140,226	-		MPMX19_05985	0.79	-1.2
140,226	-		MPMX19_05985	0.79	-2.0
140,226	-		MPMX19_05985	0.79	+0.4
140,226	-		MPMX19_05985	0.79	+0.1
140,226	-		MPMX19_05985	0.79	-1.4
140,226	-		MPMX19_05985	0.79	-0.7
140,226	-		MPMX19_05985	0.79	-2.0
140,303	+				-0.7
140,303	+				-2.0
140,303	+				-0.1
140,303	+				+0.0
140,303	+				-0.0
140,303	+				+0.2
140,303	+				-1.1
140,303	+				-0.3
140,303	+				-0.6
140,303	+				-0.2
140,303	+				-1.1
140,303	+				-0.8
140,303	+				+2.1
140,303	+				+0.5
140,303	+				-0.5
140,304	-				-1.1
140,304	-				+0.1
140,304	-				-0.7
140,304	-				+0.1
140,304	-				+1.0
140,304	-				-1.5
140,304	-				-0.9
140,304	-				-0.2
140,304	-				-0.6
140,304	-				-1.9
140,304	-				-0.8
140,304	-				-1.0
140,304	-				-1.0
140,304	-				-1.9
140,304	-				+1.0
140,304	-				-1.7
140,304	-				+0.3
140,304	-				-0.3
140,304	-				+0.2
140,304	-				-0.7
140,304	-				-0.6
140,304	-				+2.0
140,304	-				+0.9
140,304	-				+0.9
140,304	-				-0.6
140,304	-				-2.1