Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05696 and MPMX19_05697 are separated by 44 nucleotides MPMX19_05697 and MPMX19_05698 are separated by 249 nucleotides
MPMX19_05696: MPMX19_05696 - Blue-light-activated histidine kinase 2, at 411,968 to 412,681
_05696
MPMX19_05697: MPMX19_05697 - hypothetical protein, at 412,726 to 413,109
_05697
MPMX19_05698: MPMX19_05698 - Cardiolipin synthase, at 413,359 to 415,641
_05698
Position (kb) 412
413
414 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 411.752 kb on + strand at 411.752 kb on + strand at 411.753 kb on - strand at 411.753 kb on - strand at 411.753 kb on - strand at 411.753 kb on - strand at 411.753 kb on - strand at 411.753 kb on - strand at 411.757 kb on + strand at 411.757 kb on + strand at 411.757 kb on + strand at 411.758 kb on - strand at 411.758 kb on - strand at 411.758 kb on - strand at 411.758 kb on - strand at 411.758 kb on - strand at 411.795 kb on + strand at 411.795 kb on + strand at 411.795 kb on + strand at 411.795 kb on + strand at 411.795 kb on + strand at 411.795 kb on + strand at 411.796 kb on - strand at 411.796 kb on - strand at 411.796 kb on - strand at 411.796 kb on - strand at 411.796 kb on - strand at 411.796 kb on - strand at 411.796 kb on - strand at 411.796 kb on - strand at 411.796 kb on - strand at 411.819 kb on + strand at 411.819 kb on + strand at 411.820 kb on - strand at 411.820 kb on - strand at 411.820 kb on - strand at 411.835 kb on + strand at 411.836 kb on - strand at 411.870 kb on + strand at 411.909 kb on + strand at 411.909 kb on + strand at 411.909 kb on + strand at 411.909 kb on + strand at 411.909 kb on + strand at 411.909 kb on + strand at 411.910 kb on - strand at 411.910 kb on - strand at 411.910 kb on - strand at 411.910 kb on - strand at 411.910 kb on - strand at 411.910 kb on - strand at 411.910 kb on - strand at 411.910 kb on - strand at 411.998 kb on + strand at 411.998 kb on + strand at 411.998 kb on + strand at 411.998 kb on + strand at 411.998 kb on + strand at 411.999 kb on - strand at 411.999 kb on - strand at 411.999 kb on - strand at 412.202 kb on + strand, within MPMX19_05696 at 412.202 kb on + strand, within MPMX19_05696 at 412.203 kb on - strand, within MPMX19_05696 at 412.203 kb on - strand, within MPMX19_05696 at 412.244 kb on + strand, within MPMX19_05696 at 412.245 kb on - strand, within MPMX19_05696 at 412.295 kb on + strand, within MPMX19_05696 at 412.295 kb on + strand, within MPMX19_05696 at 412.295 kb on + strand, within MPMX19_05696 at 412.295 kb on + strand, within MPMX19_05696 at 412.295 kb on + strand, within MPMX19_05696 at 412.295 kb on + strand, within MPMX19_05696 at 412.295 kb on + strand, within MPMX19_05696 at 412.295 kb on + strand, within MPMX19_05696 at 412.296 kb on - strand, within MPMX19_05696 at 412.296 kb on - strand, within MPMX19_05696 at 412.296 kb on - strand, within MPMX19_05696 at 412.394 kb on + strand, within MPMX19_05696 at 412.394 kb on + strand, within MPMX19_05696 at 412.394 kb on + strand, within MPMX19_05696 at 412.394 kb on + strand, within MPMX19_05696 at 412.395 kb on - strand, within MPMX19_05696 at 412.395 kb on - strand, within MPMX19_05696 at 412.395 kb on - strand, within MPMX19_05696 at 412.395 kb on - strand, within MPMX19_05696 at 412.395 kb on - strand, within MPMX19_05696 at 412.395 kb on - strand, within MPMX19_05696 at 412.590 kb on + strand, within MPMX19_05696 at 412.590 kb on + strand, within MPMX19_05696 at 412.590 kb on + strand, within MPMX19_05696 at 412.591 kb on - strand, within MPMX19_05696 at 412.935 kb on + strand, within MPMX19_05697 at 413.033 kb on + strand, within MPMX19_05697 at 413.033 kb on + strand, within MPMX19_05697 at 413.033 kb on + strand, within MPMX19_05697 at 413.033 kb on + strand, within MPMX19_05697 at 413.034 kb on - strand, within MPMX19_05697 at 413.034 kb on - strand, within MPMX19_05697 at 413.034 kb on - strand, within MPMX19_05697 at 413.034 kb on - strand, within MPMX19_05697 at 413.034 kb on - strand, within MPMX19_05697 at 413.034 kb on - strand, within MPMX19_05697 at 413.034 kb on - strand, within MPMX19_05697 at 413.034 kb on - strand, within MPMX19_05697 at 413.034 kb on - strand, within MPMX19_05697 at 413.034 kb on - strand, within MPMX19_05697 at 413.034 kb on - strand, within MPMX19_05697 at 413.213 kb on + strand at 413.214 kb on - strand at 413.214 kb on - strand at 413.245 kb on + strand at 413.245 kb on + strand at 413.245 kb on + strand at 413.245 kb on + strand at 413.245 kb on + strand at 413.245 kb on + strand at 413.246 kb on - strand at 413.246 kb on - strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.327 kb on + strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.328 kb on - strand at 413.362 kb on + strand at 413.362 kb on + strand at 413.362 kb on + strand at 413.362 kb on + strand at 413.362 kb on + strand at 413.362 kb on + strand at 413.362 kb on + strand at 413.362 kb on + strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.363 kb on - strand at 413.515 kb on + strand at 413.515 kb on + strand at 413.515 kb on + strand at 413.515 kb on + strand at 413.515 kb on + strand at 413.515 kb on + strand at 413.516 kb on - strand at 413.516 kb on - strand at 413.516 kb on - strand at 413.516 kb on - strand at 413.516 kb on - strand at 413.516 kb on - strand at 413.516 kb on - strand at 413.516 kb on - strand at 413.516 kb on - strand at 413.516 kb on - strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.563 kb on + strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.564 kb on - strand at 413.707 kb on + strand, within MPMX19_05698 at 413.707 kb on + strand, within MPMX19_05698 at 413.707 kb on + strand, within MPMX19_05698 at 413.707 kb on + strand, within MPMX19_05698 at 413.707 kb on + strand, within MPMX19_05698 at 413.707 kb on + strand, within MPMX19_05698 at 413.707 kb on + strand, within MPMX19_05698 at 413.707 kb on + strand, within MPMX19_05698 at 413.708 kb on - strand, within MPMX19_05698 at 413.708 kb on - strand, within MPMX19_05698 at 413.708 kb on - strand, within MPMX19_05698 at 413.708 kb on - strand, within MPMX19_05698 at 413.708 kb on - strand, within MPMX19_05698 at 413.708 kb on - strand, within MPMX19_05698 at 413.708 kb on - strand, within MPMX19_05698 at 413.708 kb on - strand, within MPMX19_05698 at 413.785 kb on + strand, within MPMX19_05698 at 413.785 kb on + strand, within MPMX19_05698 at 413.786 kb on - strand, within MPMX19_05698 at 413.953 kb on + strand, within MPMX19_05698 at 413.953 kb on + strand, within MPMX19_05698 at 413.953 kb on + strand, within MPMX19_05698 at 413.953 kb on + strand, within MPMX19_05698 at 413.954 kb on - strand, within MPMX19_05698 at 413.954 kb on - strand, within MPMX19_05698
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 411,752 + +0.4 411,752 + -1.4 411,753 - +0.5 411,753 - -1.1 411,753 - -0.6 411,753 - -1.1 411,753 - -0.4 411,753 - -0.1 411,757 + +0.5 411,757 + +0.5 411,757 + -1.3 411,758 - -1.1 411,758 - -1.6 411,758 - +0.6 411,758 - -0.5 411,758 - -0.9 411,795 + -0.9 411,795 + -0.9 411,795 + +1.4 411,795 + +0.8 411,795 + -1.7 411,795 + +0.9 411,796 - +0.7 411,796 - +0.4 411,796 - -0.0 411,796 - -2.2 411,796 - -0.5 411,796 - +0.3 411,796 - -1.1 411,796 - -0.7 411,796 - -0.7 411,819 + -1.2 411,819 + -0.1 411,820 - -2.3 411,820 - -0.5 411,820 - -1.4 411,835 + -0.2 411,836 - -0.6 411,870 + -0.9 411,909 + +1.4 411,909 + -1.1 411,909 + -0.4 411,909 + +0.4 411,909 + -2.1 411,909 + -1.1 411,910 - -0.6 411,910 - -0.2 411,910 - -1.6 411,910 - -0.9 411,910 - -2.4 411,910 - -0.0 411,910 - +0.5 411,910 - -0.2 411,998 + -0.5 411,998 + -0.7 411,998 + -1.1 411,998 + -1.1 411,998 + +0.6 411,999 - +1.1 411,999 - -1.0 411,999 - -0.3 412,202 + MPMX19_05696 0.33 -0.7 412,202 + MPMX19_05696 0.33 -0.1 412,203 - MPMX19_05696 0.33 -1.1 412,203 - MPMX19_05696 0.33 -0.7 412,244 + MPMX19_05696 0.39 -1.4 412,245 - MPMX19_05696 0.39 -0.4 412,295 + MPMX19_05696 0.46 -1.7 412,295 + MPMX19_05696 0.46 -0.7 412,295 + MPMX19_05696 0.46 -0.5 412,295 + MPMX19_05696 0.46 -1.3 412,295 + MPMX19_05696 0.46 -2.3 412,295 + MPMX19_05696 0.46 -0.7 412,295 + MPMX19_05696 0.46 -1.3 412,295 + MPMX19_05696 0.46 -0.2 412,296 - MPMX19_05696 0.46 +2.1 412,296 - MPMX19_05696 0.46 -1.1 412,296 - MPMX19_05696 0.46 -0.2 412,394 + MPMX19_05696 0.60 -0.6 412,394 + MPMX19_05696 0.60 -1.0 412,394 + MPMX19_05696 0.60 -1.0 412,394 + MPMX19_05696 0.60 -1.6 412,395 - MPMX19_05696 0.60 +2.1 412,395 - MPMX19_05696 0.60 -0.3 412,395 - MPMX19_05696 0.60 +0.1 412,395 - MPMX19_05696 0.60 -1.0 412,395 - MPMX19_05696 0.60 -0.7 412,395 - MPMX19_05696 0.60 -1.6 412,590 + MPMX19_05696 0.87 -1.9 412,590 + MPMX19_05696 0.87 -0.3 412,590 + MPMX19_05696 0.87 +0.9 412,591 - MPMX19_05696 0.87 -1.3 412,935 + MPMX19_05697 0.54 -0.4 413,033 + MPMX19_05697 0.80 -0.9 413,033 + MPMX19_05697 0.80 -0.1 413,033 + MPMX19_05697 0.80 -1.2 413,033 + MPMX19_05697 0.80 -0.9 413,034 - MPMX19_05697 0.80 -0.2 413,034 - MPMX19_05697 0.80 +0.1 413,034 - MPMX19_05697 0.80 -1.3 413,034 - MPMX19_05697 0.80 +0.5 413,034 - MPMX19_05697 0.80 -0.7 413,034 - MPMX19_05697 0.80 -2.1 413,034 - MPMX19_05697 0.80 +0.5 413,034 - MPMX19_05697 0.80 -0.5 413,034 - MPMX19_05697 0.80 -1.6 413,034 - MPMX19_05697 0.80 +0.8 413,034 - MPMX19_05697 0.80 +0.9 413,213 + +0.3 413,214 - -1.7 413,214 - +0.9 413,245 + +0.4 413,245 + -0.5 413,245 + -0.0 413,245 + +0.7 413,245 + -0.5 413,245 + -0.7 413,246 - -1.3 413,246 - +0.6 413,327 + +0.6 413,327 + +0.0 413,327 + -0.5 413,327 + -0.8 413,327 + -1.8 413,327 + -0.2 413,327 + -0.5 413,327 + +0.4 413,327 + -0.9 413,327 + +1.3 413,327 + -0.9 413,327 + +2.1 413,327 + +0.3 413,327 + -1.6 413,327 + -0.2 413,327 + +0.3 413,327 + -0.3 413,327 + -0.5 413,327 + +0.3 413,328 - -0.3 413,328 - -1.4 413,328 - +0.4 413,328 - -0.7 413,328 - -0.8 413,328 - +0.1 413,328 - +0.3 413,328 - +0.0 413,328 - -0.9 413,328 - +0.4 413,328 - -0.2 413,328 - -0.8 413,328 - -0.9 413,328 - +0.6 413,328 - -0.7 413,328 - -1.5 413,328 - +0.5 413,328 - -1.4 413,328 - +0.5 413,328 - -1.9 413,328 - +0.4 413,328 - +0.1 413,328 - -1.9 413,328 - +0.1 413,328 - -1.1 413,328 - -0.1 413,362 + +0.2 413,362 + +0.6 413,362 + -0.2 413,362 + -0.9 413,362 + -0.8 413,362 + -0.5 413,362 + +0.1 413,362 + +0.6 413,363 - -0.1 413,363 - -1.2 413,363 - -1.8 413,363 - -1.2 413,363 - -0.2 413,363 - -1.1 413,363 - -2.2 413,363 - -1.2 413,363 - +0.8 413,363 - -0.8 413,363 - -1.4 413,363 - +0.5 413,363 - -0.7 413,363 - -1.9 413,363 - +0.3 413,363 - -1.2 413,363 - -0.5 413,363 - +0.3 413,363 - -0.5 413,363 - +0.1 413,363 - -0.5 413,363 - +0.4 413,363 - -1.2 413,363 - -0.9 413,515 + +0.1 413,515 + +0.1 413,515 + -1.7 413,515 + +1.7 413,515 + -1.7 413,515 + +1.1 413,516 - -0.5 413,516 - +0.5 413,516 - -1.0 413,516 - +0.9 413,516 - -0.1 413,516 - +2.1 413,516 - -0.5 413,516 - -0.2 413,516 - -0.4 413,516 - -1.2 413,563 + +0.1 413,563 + +0.8 413,563 + -0.9 413,563 + +3.1 413,563 + +1.5 413,563 + -0.6 413,563 + +0.8 413,563 + -0.9 413,563 + +1.1 413,563 + -0.5 413,563 + +1.1 413,563 + -0.5 413,563 + +0.7 413,563 + -2.1 413,563 + +0.8 413,563 + +1.5 413,563 + -0.5 413,563 + +0.5 413,563 + +0.2 413,563 + -1.1 413,563 + +0.4 413,563 + +1.4 413,563 + -0.7 413,563 + -0.9 413,563 + -0.7 413,563 + +2.1 413,563 + +0.1 413,563 + +1.5 413,564 - -0.1 413,564 - -0.1 413,564 - -2.5 413,564 - +0.1 413,564 - -0.2 413,564 - +0.4 413,564 - -1.9 413,564 - -0.1 413,564 - -1.5 413,564 - -1.1 413,564 - -0.1 413,564 - -2.4 413,564 - -1.4 413,564 - +0.6 413,564 - +0.1 413,564 - -0.1 413,564 - +0.7 413,564 - -0.2 413,564 - -0.1 413,564 - +0.9 413,564 - -1.4 413,564 - -0.1 413,564 - -0.7 413,564 - -1.2 413,564 - -1.6 413,564 - -0.7 413,564 - -0.9 413,707 + MPMX19_05698 0.15 -1.5 413,707 + MPMX19_05698 0.15 -0.1 413,707 + MPMX19_05698 0.15 +0.2 413,707 + MPMX19_05698 0.15 +0.0 413,707 + MPMX19_05698 0.15 +1.0 413,707 + MPMX19_05698 0.15 +0.8 413,707 + MPMX19_05698 0.15 +0.4 413,707 + MPMX19_05698 0.15 -0.7 413,708 - MPMX19_05698 0.15 -0.2 413,708 - MPMX19_05698 0.15 -1.1 413,708 - MPMX19_05698 0.15 -1.5 413,708 - MPMX19_05698 0.15 -1.4 413,708 - MPMX19_05698 0.15 -0.9 413,708 - MPMX19_05698 0.15 +0.1 413,708 - MPMX19_05698 0.15 -1.1 413,708 - MPMX19_05698 0.15 -1.1 413,785 + MPMX19_05698 0.19 -0.0 413,785 + MPMX19_05698 0.19 +0.3 413,786 - MPMX19_05698 0.19 -2.2 413,953 + MPMX19_05698 0.26 -0.4 413,953 + MPMX19_05698 0.26 -0.1 413,953 + MPMX19_05698 0.26 -0.7 413,953 + MPMX19_05698 0.26 +0.5 413,954 - MPMX19_05698 0.26 -0.9 413,954 - MPMX19_05698 0.26 +0.9
Or see this region's nucleotide sequence