Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05459

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
145,219	+		MPMX19_05457	0.76	-0.2
145,248	+		MPMX19_05457	0.82	-0.2
145,248	+		MPMX19_05457	0.82	-1.0
145,248	+		MPMX19_05457	0.82	-1.3
145,249	-		MPMX19_05457	0.82	-1.3
145,249	-		MPMX19_05457	0.82	-0.7
145,249	-		MPMX19_05457	0.82	-0.4
145,262	+		MPMX19_05457	0.85	+0.5
145,262	+		MPMX19_05457	0.85	+0.1
145,263	-		MPMX19_05457	0.85	-1.4
145,263	-		MPMX19_05457	0.85	-0.3
145,334	+				-1.0
145,334	+				-1.5
145,334	+				+1.1
145,334	+				-1.5
145,335	-				-0.7
145,335	-				-1.7
145,420	+				-0.8
145,420	+				-0.8
145,420	+				-1.5
145,420	+				+0.8
145,420	+				-0.6
145,420	+				+0.6
145,420	+				+1.3
145,420	+				-1.1
145,420	+				-0.5
145,420	+				-1.5
145,420	+				+0.1
145,420	+				-1.3
145,420	+				-0.8
145,420	+				+0.3
145,420	+				-1.3
145,420	+				-0.6
145,420	+				+1.5
145,420	+				+0.5
145,420	+				-0.2
145,420	+				+0.0
145,420	+				+0.9
145,420	+				+0.8
145,420	+				-0.4
145,420	+				-0.5
145,420	+				-1.0
145,420	+				-1.3
145,421	-				+1.1
145,421	-				-0.0
145,421	-				-0.3
145,421	-				-1.0
145,421	-				-0.9
145,421	-				+0.4
145,421	-				-0.1
145,421	-				-1.5
145,421	-				+1.1
145,421	-				-1.5
145,421	-				+0.2
145,421	-				-0.7
145,421	-				-0.2
145,421	-				-0.2
145,421	-				-1.0
145,421	-				+0.5
145,701	+		MPMX19_05458	0.46	-1.0
145,702	-		MPMX19_05458	0.46	-0.5
145,759	-		MPMX19_05458	0.53	-2.0
145,854	-		MPMX19_05458	0.66	-1.3
145,854	-		MPMX19_05458	0.66	+0.8
145,870	+		MPMX19_05458	0.68	-0.6
145,870	+		MPMX19_05458	0.68	-0.5
145,872	+		MPMX19_05458	0.69	-0.0
145,872	+		MPMX19_05458	0.69	-0.8
145,873	-		MPMX19_05458	0.69	+0.8
145,873	-		MPMX19_05458	0.69	-1.9
146,000	+		MPMX19_05458	0.86	-0.2
146,000	+		MPMX19_05458	0.86	-1.6
146,001	-		MPMX19_05458	0.86	+0.7
146,001	-		MPMX19_05458	0.86	+1.1
146,048	+				+1.1
146,048	+				-0.2
146,048	+				+2.1
146,048	+				-1.6
146,048	+				-0.2
146,048	+				+1.5
146,048	+				-1.0
146,048	+				-0.1
146,048	+				-2.1
146,048	+				-0.5
146,048	+				+1.1
146,048	+				-0.5
146,049	-				+0.1
146,049	-				-2.0
146,049	-				+0.2
146,049	-				-0.8
146,049	-				-1.0
146,049	-				-1.4
146,049	-				+0.9
146,049	-				-1.2
146,049	-				-0.2
146,049	-				-1.5
146,145	-				+0.4
146,313	-		MPMX19_05459	0.37	+1.1
146,313	-		MPMX19_05459	0.37	-1.8
146,368	+		MPMX19_05459	0.57	-0.9
146,369	-		MPMX19_05459	0.57	-2.3
146,444	+		MPMX19_05459	0.84	+0.1
146,445	-		MPMX19_05459	0.85	-2.3
146,564	+				-1.0
146,564	+				-0.5
146,564	+				-0.7
146,564	+				-1.2
146,564	+				+1.1
146,564	+				-0.7
146,564	+				+0.6
146,565	-				-1.2
146,565	-				+0.5
146,565	-				+1.3
146,565	-				-1.9
146,565	-				-1.0
146,566	+				+2.1
146,566	+				-0.9
146,566	+				-1.6
146,566	+				-0.5
146,566	+				-1.7
146,566	+				+0.1
146,566	+				-0.5
146,566	+				+1.0
146,567	-				-1.2
146,567	-				-0.2
146,567	-				-0.7
146,567	-				+0.7
146,567	-				-1.2
146,567	-				-0.6
146,567	-				-0.4
146,567	-				+0.5
146,567	-				+0.5
146,567	-				-1.2
146,665	+				-1.9
146,665	+				-2.2
146,665	+				-0.3
146,665	+				-1.5
146,665	+				-0.5
146,665	+				+0.2
146,665	+				+0.5
146,665	+				-0.8
146,665	+				+0.2
146,665	+				-2.0
146,665	+				-0.5
146,665	+				-0.8
146,665	+				+0.1
146,665	+				+0.5
146,665	+				-1.0
146,665	+				+0.5
146,665	+				-2.3
146,665	+				-2.7
146,666	-				-0.8
146,666	-				+0.3
146,666	-				+0.3
146,666	-				+0.5
146,666	-				-1.2
146,666	-				+0.8
146,666	-				-0.2
146,666	-				-0.5
146,666	-				-1.3
146,666	-				-0.8
146,666	-				-1.5
146,666	-				+0.5
146,666	-				+0.4
146,666	-				-0.7
146,670	+				-1.8
146,670	+				+1.7
146,670	+				-0.5
146,670	+				+1.7
146,670	+				+0.1
146,670	+				+2.1
146,670	+				-0.5
146,670	+				-3.1
146,670	+				-0.7
146,671	-				-0.5
146,671	-				+1.1
146,671	-				-1.6
146,671	-				-1.1
146,671	-				-0.3
146,671	-				-2.0
146,671	-				-1.1
146,671	-				-0.4
146,671	-				+0.0
146,671	-				-0.9
146,671	-				-0.0
146,671	-				+0.8
146,671	-				-2.3
146,671	-				+0.5
146,671	-				-1.5
146,671	-				-1.5
146,671	-				+2.1
146,671	-				-0.8
146,696	+				-0.7
146,696	+				-2.1
146,696	+				-0.2
146,696	+				-0.2
146,696	+				-1.7
146,696	+				-0.5
146,696	+				-0.7
146,696	+				-1.2
146,696	+				-0.9
146,696	+				-0.8
146,696	+				-0.0
146,696	+				-1.3
146,696	+				-0.8
146,696	+				-0.0
146,696	+				-1.3
146,696	+				+1.5
146,697	-				+0.1
146,697	-				-1.8
146,697	-				-0.5
146,697	-				-1.0
146,697	-				-1.8
146,697	-				-1.6
146,697	-				+0.3
146,697	-				-1.9
146,885	+				-0.6
146,885	+				-1.6
146,885	+				-1.0
146,885	+				-2.3
146,885	+				-1.3
146,885	+				-0.5
146,885	+				-2.0
146,886	-				-0.6
146,886	-				-1.8
146,886	-				-0.0
146,886	-				-0.9
147,327	+		MPMX19_05460	0.20	-1.0
147,327	+		MPMX19_05460	0.20	+0.5
147,327	+		MPMX19_05460	0.20	-0.9
147,327	+		MPMX19_05460	0.20	-0.8
147,327	+		MPMX19_05460	0.20	-0.2
147,327	+		MPMX19_05460	0.20	+0.5
147,327	+		MPMX19_05460	0.20	-0.9
147,327	+		MPMX19_05460	0.20	-1.3
147,328	-		MPMX19_05460	0.20	-0.7
147,328	-		MPMX19_05460	0.20	-0.9
147,328	-		MPMX19_05460	0.20	-0.9
147,328	-		MPMX19_05460	0.20	-0.7
147,328	-		MPMX19_05460	0.20	-1.0
147,328	-		MPMX19_05460	0.20	-1.0
147,328	-		MPMX19_05460	0.20	+0.1
147,328	-		MPMX19_05460	0.20	+0.3
147,328	-		MPMX19_05460	0.20	-0.3
147,328	-		MPMX19_05460	0.20	+0.1