Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05424

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
113,425	-		MPMX19_05423	0.52	-1.3
113,447	+		MPMX19_05423	0.53	-1.2
113,447	+		MPMX19_05423	0.53	+0.5
113,447	+		MPMX19_05423	0.53	-1.6
113,447	+		MPMX19_05423	0.53	-0.2
113,447	+		MPMX19_05423	0.53	+1.1
113,447	+		MPMX19_05423	0.53	-0.5
113,447	+		MPMX19_05423	0.53	+0.2
113,447	+		MPMX19_05423	0.53	+0.1
113,447	+		MPMX19_05423	0.53	+0.1
113,448	-		MPMX19_05423	0.53	-0.6
113,448	-		MPMX19_05423	0.53	+0.8
113,448	-		MPMX19_05423	0.53	-0.5
113,448	-		MPMX19_05423	0.53	+1.7
113,448	-		MPMX19_05423	0.53	+1.5
113,448	-		MPMX19_05423	0.53	-1.0
113,448	-		MPMX19_05423	0.53	-1.6
113,448	-		MPMX19_05423	0.53	-1.3
113,448	-		MPMX19_05423	0.53	-0.7
113,453	+		MPMX19_05423	0.53	+1.1
113,453	+		MPMX19_05423	0.53	-0.5
113,453	+		MPMX19_05423	0.53	+0.3
113,453	+		MPMX19_05423	0.53	-0.8
113,453	+		MPMX19_05423	0.53	+0.8
113,453	+		MPMX19_05423	0.53	+0.5
113,453	+		MPMX19_05423	0.53	-0.7
113,453	+		MPMX19_05423	0.53	+0.5
113,453	+		MPMX19_05423	0.53	+0.5
113,453	+		MPMX19_05423	0.53	-0.7
113,453	+		MPMX19_05423	0.53	-1.2
113,453	+		MPMX19_05423	0.53	+0.1
113,453	+		MPMX19_05423	0.53	+0.5
113,453	+		MPMX19_05423	0.53	-1.2
113,453	+		MPMX19_05423	0.53	-2.5
113,454	-		MPMX19_05423	0.54	-1.3
113,454	-		MPMX19_05423	0.54	-0.4
113,454	-		MPMX19_05423	0.54	-0.6
113,454	-		MPMX19_05423	0.54	-2.2
113,454	-		MPMX19_05423	0.54	-1.2
113,454	-		MPMX19_05423	0.54	-1.0
113,454	-		MPMX19_05423	0.54	-0.0
113,454	-		MPMX19_05423	0.54	-0.5
113,747	+		MPMX19_05423	0.73	-1.0
113,747	+		MPMX19_05423	0.73	-0.7
113,747	+		MPMX19_05423	0.73	-1.5
113,747	+		MPMX19_05423	0.73	+0.3
113,747	+		MPMX19_05423	0.73	-0.0
113,747	+		MPMX19_05423	0.73	-1.7
113,747	+		MPMX19_05423	0.73	-1.7
113,747	+		MPMX19_05423	0.73	-1.0
113,747	+		MPMX19_05423	0.73	-1.2
113,747	+		MPMX19_05423	0.73	-0.8
113,747	+		MPMX19_05423	0.73	+0.5
113,747	+		MPMX19_05423	0.73	-0.9
113,748	-		MPMX19_05423	0.73	+0.2
113,748	-		MPMX19_05423	0.73	-1.8
113,748	-		MPMX19_05423	0.73	-1.0
113,748	-		MPMX19_05423	0.73	-1.2
113,748	-		MPMX19_05423	0.73	-0.7
113,748	-		MPMX19_05423	0.73	-1.4
113,748	-		MPMX19_05423	0.73	-0.9
113,748	-		MPMX19_05423	0.73	-1.0
113,748	-		MPMX19_05423	0.73	-0.3
113,748	-		MPMX19_05423	0.73	-2.2
113,748	-		MPMX19_05423	0.73	-1.0
113,748	-		MPMX19_05423	0.73	-1.9
113,748	-		MPMX19_05423	0.73	-1.0
113,748	-		MPMX19_05423	0.73	-0.2
113,748	-		MPMX19_05423	0.73	-1.5
113,748	-		MPMX19_05423	0.73	+0.5
113,748	-		MPMX19_05423	0.73	-0.7
113,748	-		MPMX19_05423	0.73	-1.1
113,748	-		MPMX19_05423	0.73	-0.6
113,909	+		MPMX19_05423	0.84	+1.2
113,909	+		MPMX19_05423	0.84	-0.6
114,077	+				-0.5
114,077	+				-0.3
114,077	+				-0.1
114,077	+				-0.9
114,077	+				-0.2
114,077	+				+0.1
114,077	+				-0.4
114,077	+				-1.2
114,078	-				+0.9
114,078	-				-1.9
114,078	-				+1.1
114,078	-				-0.7
114,078	-				-0.7
114,153	+				-0.9
114,153	+				-1.0
114,153	+				+0.5
114,302	+				+1.1
114,302	+				-1.2
114,302	+				+0.5
114,302	+				-0.2
114,302	+				-0.5
114,303	-				-0.1
114,303	-				-0.7
114,303	-				-1.2
114,303	-				-1.8
114,303	-				-1.0
114,303	-				-2.3
114,304	+				-0.0
114,304	+				-1.7
114,304	+				-0.8
114,304	+				-0.5
114,304	+				-1.6
114,304	+				+0.8
114,304	+				-0.8
114,304	+				+1.5
114,304	+				-0.9
114,304	+				-0.5
114,304	+				-0.2
114,304	+				+0.1
114,304	+				-1.6
114,304	+				-0.5
114,304	+				-2.0
114,304	+				+0.3
114,304	+				-0.8
114,304	+				-0.1
114,304	+				-0.2
114,305	-				-0.6
114,305	-				+0.8
114,305	-				+0.9
114,305	-				-0.7
114,305	-				-0.8
114,305	-				-1.6
114,305	-				-1.5
114,305	-				+0.3
114,305	-				+1.6
114,447	+				-0.9
114,447	+				-0.2
114,447	+				-0.9
114,448	-				-0.7
114,448	-				+0.1
114,448	-				+0.0
114,629	-		MPMX19_05424	0.22	+0.5
114,783	+		MPMX19_05424	0.37	-0.2
114,783	+		MPMX19_05424	0.37	-0.5
114,783	+		MPMX19_05424	0.37	-0.1
114,783	+		MPMX19_05424	0.37	-1.4
114,783	+		MPMX19_05424	0.37	+1.8
114,783	+		MPMX19_05424	0.37	-0.2
114,783	+		MPMX19_05424	0.37	-0.3
114,783	+		MPMX19_05424	0.37	+0.0
114,783	+		MPMX19_05424	0.37	+0.3
114,783	+		MPMX19_05424	0.37	+0.2
114,783	+		MPMX19_05424	0.37	-1.2
114,783	+		MPMX19_05424	0.37	-0.9
114,783	+		MPMX19_05424	0.37	-0.2
114,783	+		MPMX19_05424	0.37	-0.8
114,783	+		MPMX19_05424	0.37	-1.8
114,783	+		MPMX19_05424	0.37	-1.6
114,783	+		MPMX19_05424	0.37	-0.5
114,783	+		MPMX19_05424	0.37	-0.2
114,783	+		MPMX19_05424	0.37	+0.0
114,783	+		MPMX19_05424	0.37	+0.8
114,784	-		MPMX19_05424	0.37	-1.5
114,784	-		MPMX19_05424	0.37	-0.5
114,784	-		MPMX19_05424	0.37	+0.6
114,784	-		MPMX19_05424	0.37	-0.4
114,784	-		MPMX19_05424	0.37	-0.1
114,784	-		MPMX19_05424	0.37	-1.6
114,784	-		MPMX19_05424	0.37	+0.5
114,784	-		MPMX19_05424	0.37	+1.9
114,784	-		MPMX19_05424	0.37	-0.7
114,784	-		MPMX19_05424	0.37	-1.1
114,784	-		MPMX19_05424	0.37	-1.6
114,784	-		MPMX19_05424	0.37	-2.1
114,784	-		MPMX19_05424	0.37	+1.4
114,784	-		MPMX19_05424	0.37	-0.8
114,784	-		MPMX19_05424	0.37	-0.5
114,784	-		MPMX19_05424	0.37	-2.0
114,784	-		MPMX19_05424	0.37	+0.1
114,784	-		MPMX19_05424	0.37	-0.9
114,923	+		MPMX19_05424	0.49	+0.3
114,923	+		MPMX19_05424	0.49	-1.6
114,924	-		MPMX19_05424	0.50	+0.1
115,062	+		MPMX19_05424	0.62	-1.1
115,062	+		MPMX19_05424	0.62	+1.1
115,062	+		MPMX19_05424	0.62	-0.9
115,062	+		MPMX19_05424	0.62	-0.5
115,063	-		MPMX19_05424	0.62	-0.8
115,063	-		MPMX19_05424	0.62	-0.5
115,063	-		MPMX19_05424	0.62	+0.1
115,063	-		MPMX19_05424	0.62	-0.4
115,089	+		MPMX19_05424	0.65	+0.8
115,089	+		MPMX19_05424	0.65	-0.0
115,089	+		MPMX19_05424	0.65	-2.3
115,090	-		MPMX19_05424	0.65	-0.6
115,090	-		MPMX19_05424	0.65	+1.5
115,090	-		MPMX19_05424	0.65	-1.6
115,090	-		MPMX19_05424	0.65	-0.9
115,090	-		MPMX19_05424	0.65	-1.7
115,090	-		MPMX19_05424	0.65	+1.0
115,097	+		MPMX19_05424	0.65	-1.3
115,257	+		MPMX19_05424	0.80	-1.3
115,257	+		MPMX19_05424	0.80	-0.3
115,257	+		MPMX19_05424	0.80	-0.6
115,257	+		MPMX19_05424	0.80	-0.0
115,257	+		MPMX19_05424	0.80	-0.6
115,257	+		MPMX19_05424	0.80	-0.2
115,257	+		MPMX19_05424	0.80	-2.4
115,258	-		MPMX19_05424	0.80	+1.1
115,258	-		MPMX19_05424	0.80	+0.5
115,258	-		MPMX19_05424	0.80	+0.1
115,258	-		MPMX19_05424	0.80	-1.6
115,258	-		MPMX19_05424	0.80	-0.7
115,258	-		MPMX19_05424	0.80	-0.5
115,474	-				-1.0
115,505	+				-1.6
115,505	+				-1.9
115,565	+				+0.3
115,565	+				+0.8
115,565	+				+1.3
115,565	+				+0.3
115,565	+				-0.5
115,565	+				-1.5
115,565	+				+0.4
115,565	+				-0.6
115,565	+				+0.1
115,565	+				+0.7
115,565	+				+0.4
115,565	+				+0.5
115,565	+				-1.5
115,565	+				+0.5
115,565	+				-0.7
115,565	+				-1.5
115,565	+				-2.5
115,566	-				-0.3
115,566	-				+1.7
115,566	-				-1.1
115,566	-				-0.5
115,566	-				-0.2
115,566	-				-1.0
115,566	-				-1.4
115,566	-				+0.1
115,566	-				+0.1
115,566	-				-0.5
115,566	-				-1.6
115,566	-				-0.7
115,566	-				-1.9
115,566	-				+0.1
115,566	-				-0.1
115,566	-				+1.1
115,566	-				-2.0
115,640	+				-0.7
115,640	+				-0.5
115,640	+				-1.0
115,640	+				+0.2
115,640	+				-0.9
115,640	+				+0.7
115,640	+				+0.2
115,640	+				-1.1
115,640	+				-1.3
115,640	+				-0.5
115,640	+				-0.8
115,640	+				-0.2
115,640	+				-0.6
115,640	+				-0.7
115,640	+				+0.5
115,640	+				-0.9
115,640	+				+0.2
115,641	-				-3.0
115,641	-				+0.2
115,641	-				-1.3
115,641	-				-1.8
115,641	-				-1.2
115,641	-				+0.6
115,641	-				-2.1
115,641	-				-0.9
115,641	-				+1.3
115,641	-				-1.1
115,641	-				-0.0
115,641	-				-1.2
115,641	-				-0.7
115,763	+				-1.8
115,763	+				+0.1
115,763	+				-1.0
115,763	+				-1.0
115,894	-		MPMX19_05425	0.17	-0.3
115,913	+		MPMX19_05425	0.18	-1.2
115,913	+		MPMX19_05425	0.18	-0.3
115,913	+		MPMX19_05425	0.18	+1.7
115,913	+		MPMX19_05425	0.18	+0.8
115,913	+		MPMX19_05425	0.18	+0.1
115,913	+		MPMX19_05425	0.18	-0.9
115,913	+		MPMX19_05425	0.18	-0.2
115,913	+		MPMX19_05425	0.18	-1.9
115,914	-		MPMX19_05425	0.18	-1.5
115,914	-		MPMX19_05425	0.18	+0.5
115,914	-		MPMX19_05425	0.18	-1.1
115,914	-		MPMX19_05425	0.18	+0.9
115,914	-		MPMX19_05425	0.18	-1.0
115,914	-		MPMX19_05425	0.18	-1.7
115,914	-		MPMX19_05425	0.18	-1.6
115,914	-		MPMX19_05425	0.18	-0.1
115,914	-		MPMX19_05425	0.18	-1.6
115,916	+		MPMX19_05425	0.19	-0.0
115,916	+		MPMX19_05425	0.19	-0.2
115,916	+		MPMX19_05425	0.19	-0.6
115,916	+		MPMX19_05425	0.19	-0.2
115,917	-		MPMX19_05425	0.19	-0.7
115,917	-		MPMX19_05425	0.19	-1.3
115,925	+		MPMX19_05425	0.19	+0.9
115,925	+		MPMX19_05425	0.19	-1.0
115,925	+		MPMX19_05425	0.19	+2.1
115,925	+		MPMX19_05425	0.19	+0.1
115,925	+		MPMX19_05425	0.19	-0.7
115,925	+		MPMX19_05425	0.19	-0.5
115,925	+		MPMX19_05425	0.19	-0.3
115,926	-		MPMX19_05425	0.19	+0.3
115,926	-		MPMX19_05425	0.19	-0.5
115,926	-		MPMX19_05425	0.19	-2.0
115,926	-		MPMX19_05425	0.19	-0.0
115,926	-		MPMX19_05425	0.19	-2.3
115,926	-		MPMX19_05425	0.19	-0.2
115,926	-		MPMX19_05425	0.19	-0.3
116,276	+		MPMX19_05425	0.44	-1.4
116,276	+		MPMX19_05425	0.44	-1.3
116,277	-		MPMX19_05425	0.44	-1.2
116,277	-		MPMX19_05425	0.44	-1.5
116,277	-		MPMX19_05425	0.44	-0.2
116,277	-		MPMX19_05425	0.44	-2.7
116,277	-		MPMX19_05425	0.44	-0.5
116,420	+		MPMX19_05425	0.55	+0.1
116,420	+		MPMX19_05425	0.55	-0.5
116,420	+		MPMX19_05425	0.55	-2.0
116,420	+		MPMX19_05425	0.55	-1.2
116,420	+		MPMX19_05425	0.55	-0.7
116,420	+		MPMX19_05425	0.55	-2.0
116,420	+		MPMX19_05425	0.55	-2.2
116,420	+		MPMX19_05425	0.55	+1.7
116,420	+		MPMX19_05425	0.55	+0.1
116,420	+		MPMX19_05425	0.55	-1.2
116,420	+		MPMX19_05425	0.55	-0.5
116,420	+		MPMX19_05425	0.55	-1.3
116,421	-		MPMX19_05425	0.55	-0.7
116,421	-		MPMX19_05425	0.55	+0.4
116,421	-		MPMX19_05425	0.55	-0.5
116,421	-		MPMX19_05425	0.55	-0.1
116,421	-		MPMX19_05425	0.55	-0.2
116,421	-		MPMX19_05425	0.55	-0.2
116,421	-		MPMX19_05425	0.55	+0.0
116,421	-		MPMX19_05425	0.55	-0.8
116,421	-		MPMX19_05425	0.55	-1.0
116,421	-		MPMX19_05425	0.55	+0.1
116,421	-		MPMX19_05425	0.55	-2.0
116,421	-		MPMX19_05425	0.55	-2.0
116,421	-		MPMX19_05425	0.55	+0.5
116,421	-		MPMX19_05425	0.55	+1.0