Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04966 and MPMX19_04967 overlap by 4 nucleotides MPMX19_04967 and MPMX19_04968 are separated by 88 nucleotides MPMX19_04968 and MPMX19_04969 are separated by 64 nucleotides
MPMX19_04966: MPMX19_04966 - hypothetical protein, at 431,329 to 432,492
_04966
MPMX19_04967: MPMX19_04967 - ADP-heptose--LPS heptosyltransferase 2, at 432,489 to 433,499
_04967
MPMX19_04968: MPMX19_04968 - hypothetical protein, at 433,588 to 434,139
_04968
MPMX19_04969: MPMX19_04969 - Glutamine-dependent NAD(+) synthetase, at 434,204 to 436,249
_04969
Position (kb) 432
433
434 Strain fitness (log2 ratio) -2
-1
0
1 at 433.436 kb on + strand at 433.483 kb on + strand at 433.606 kb on + strand at 433.606 kb on + strand at 433.606 kb on + strand at 433.606 kb on + strand at 433.606 kb on + strand at 433.606 kb on + strand at 433.606 kb on + strand at 433.607 kb on - strand at 433.607 kb on - strand at 433.607 kb on - strand at 433.607 kb on - strand at 433.607 kb on - strand at 433.607 kb on - strand at 433.607 kb on - strand at 433.607 kb on - strand at 433.677 kb on + strand, within MPMX19_04968 at 433.678 kb on - strand, within MPMX19_04968 at 433.678 kb on - strand, within MPMX19_04968 at 433.714 kb on + strand, within MPMX19_04968 at 433.714 kb on + strand, within MPMX19_04968 at 433.715 kb on - strand, within MPMX19_04968 at 434.409 kb on + strand, within MPMX19_04969 at 434.409 kb on + strand, within MPMX19_04969 at 434.409 kb on + strand, within MPMX19_04969 at 434.410 kb on - strand, within MPMX19_04969
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 433,436 + -1.2 433,483 + +1.1 433,606 + +0.4 433,606 + -1.1 433,606 + +0.3 433,606 + -1.1 433,606 + -2.2 433,606 + +0.2 433,606 + -0.9 433,607 - -0.9 433,607 - -1.4 433,607 - -1.0 433,607 - -1.4 433,607 - -1.8 433,607 - -0.3 433,607 - -1.4 433,607 - -1.6 433,677 + MPMX19_04968 0.16 -1.3 433,678 - MPMX19_04968 0.16 -2.6 433,678 - MPMX19_04968 0.16 -1.2 433,714 + MPMX19_04968 0.23 -0.2 433,714 + MPMX19_04968 0.23 +0.3 433,715 - MPMX19_04968 0.23 -2.0 434,409 + MPMX19_04969 0.10 -1.5 434,409 + MPMX19_04969 0.10 -0.4 434,409 + MPMX19_04969 0.10 -1.6 434,410 - MPMX19_04969 0.10 -0.9
Or see this region's nucleotide sequence