Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04812 and MPMX19_04813 are separated by 301 nucleotides MPMX19_04813 and MPMX19_04814 are separated by 213 nucleotides
MPMX19_04812: MPMX19_04812 - hypothetical protein, at 216,230 to 216,943
_04812
MPMX19_04813: MPMX19_04813 - Phosphate-specific transport system accessory protein PhoU, at 217,245 to 218,024
_04813
MPMX19_04814: MPMX19_04814 - ATP phosphoribosyltransferase regulatory subunit, at 218,238 to 219,392
_04814
Position (kb) 217
218
219 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 216.327 kb on + strand, within MPMX19_04812 at 216.327 kb on + strand, within MPMX19_04812 at 216.327 kb on + strand, within MPMX19_04812 at 216.327 kb on + strand, within MPMX19_04812 at 216.327 kb on + strand, within MPMX19_04812 at 216.327 kb on + strand, within MPMX19_04812 at 216.327 kb on + strand, within MPMX19_04812 at 216.327 kb on + strand, within MPMX19_04812 at 216.327 kb on + strand, within MPMX19_04812 at 216.328 kb on - strand, within MPMX19_04812 at 216.328 kb on - strand, within MPMX19_04812 at 216.328 kb on - strand, within MPMX19_04812 at 216.328 kb on - strand, within MPMX19_04812 at 216.328 kb on - strand, within MPMX19_04812 at 216.328 kb on - strand, within MPMX19_04812 at 216.711 kb on + strand, within MPMX19_04812 at 216.711 kb on + strand, within MPMX19_04812 at 216.711 kb on + strand, within MPMX19_04812 at 216.712 kb on - strand, within MPMX19_04812 at 216.768 kb on + strand, within MPMX19_04812 at 216.768 kb on + strand, within MPMX19_04812 at 216.768 kb on + strand, within MPMX19_04812 at 216.769 kb on - strand, within MPMX19_04812 at 216.769 kb on - strand, within MPMX19_04812 at 216.769 kb on - strand, within MPMX19_04812 at 216.769 kb on - strand, within MPMX19_04812 at 216.978 kb on + strand at 216.979 kb on - strand at 216.979 kb on - strand at 216.979 kb on - strand at 216.999 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.000 kb on + strand at 217.001 kb on - strand at 217.001 kb on - strand at 217.001 kb on - strand at 217.001 kb on - strand at 217.001 kb on - strand at 217.001 kb on - strand at 217.001 kb on - strand at 217.001 kb on - strand at 217.001 kb on - strand at 217.001 kb on - strand at 217.001 kb on - strand at 217.001 kb on - strand at 217.001 kb on - strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.002 kb on + strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.003 kb on - strand at 217.028 kb on - strand at 217.049 kb on + strand at 217.050 kb on - strand at 217.087 kb on + strand at 217.088 kb on - strand at 217.114 kb on + strand at 217.114 kb on + strand at 217.114 kb on + strand at 217.114 kb on + strand at 217.114 kb on + strand at 217.114 kb on + strand at 217.114 kb on + strand at 217.114 kb on + strand at 217.114 kb on + strand at 217.114 kb on + strand at 217.114 kb on + strand at 217.114 kb on + strand at 217.114 kb on + strand at 217.115 kb on - strand at 217.115 kb on - strand at 217.115 kb on - strand at 217.115 kb on - strand at 217.115 kb on - strand at 217.115 kb on - strand at 217.115 kb on - strand at 217.115 kb on - strand at 217.115 kb on - strand at 217.115 kb on - strand at 217.133 kb on + strand at 217.169 kb on + strand at 217.169 kb on + strand at 217.169 kb on + strand at 217.169 kb on + strand at 217.169 kb on + strand at 217.169 kb on + strand at 217.170 kb on - strand at 217.170 kb on - strand at 217.170 kb on - strand at 217.170 kb on - strand at 217.170 kb on - strand at 217.170 kb on - strand at 217.171 kb on + strand at 217.171 kb on + strand at 217.171 kb on + strand at 217.171 kb on + strand at 217.171 kb on + strand at 217.171 kb on + strand at 217.171 kb on + strand at 217.171 kb on + strand at 217.172 kb on - strand at 217.172 kb on - strand at 217.172 kb on - strand at 217.172 kb on - strand at 217.172 kb on - strand at 217.172 kb on - strand at 217.172 kb on - strand at 217.172 kb on - strand at 217.172 kb on - strand at 217.251 kb on - strand at 217.422 kb on + strand, within MPMX19_04813 at 217.422 kb on + strand, within MPMX19_04813 at 217.422 kb on + strand, within MPMX19_04813 at 217.422 kb on + strand, within MPMX19_04813 at 217.545 kb on + strand, within MPMX19_04813 at 217.545 kb on + strand, within MPMX19_04813 at 217.545 kb on + strand, within MPMX19_04813 at 217.546 kb on - strand, within MPMX19_04813 at 217.546 kb on - strand, within MPMX19_04813 at 217.546 kb on - strand, within MPMX19_04813 at 217.546 kb on - strand, within MPMX19_04813 at 217.668 kb on + strand, within MPMX19_04813 at 217.668 kb on + strand, within MPMX19_04813 at 217.668 kb on + strand, within MPMX19_04813 at 217.668 kb on + strand, within MPMX19_04813 at 217.668 kb on + strand, within MPMX19_04813 at 217.668 kb on + strand, within MPMX19_04813 at 217.668 kb on + strand, within MPMX19_04813 at 217.668 kb on + strand, within MPMX19_04813 at 217.668 kb on + strand, within MPMX19_04813 at 217.668 kb on + strand, within MPMX19_04813 at 217.669 kb on - strand, within MPMX19_04813 at 217.669 kb on - strand, within MPMX19_04813 at 217.669 kb on - strand, within MPMX19_04813 at 217.669 kb on - strand, within MPMX19_04813 at 217.669 kb on - strand, within MPMX19_04813 at 217.669 kb on - strand, within MPMX19_04813 at 217.669 kb on - strand, within MPMX19_04813 at 217.734 kb on + strand, within MPMX19_04813 at 217.734 kb on + strand, within MPMX19_04813 at 217.734 kb on + strand, within MPMX19_04813 at 217.734 kb on + strand, within MPMX19_04813 at 217.734 kb on + strand, within MPMX19_04813 at 217.734 kb on + strand, within MPMX19_04813 at 217.734 kb on + strand, within MPMX19_04813 at 217.734 kb on + strand, within MPMX19_04813 at 217.735 kb on - strand, within MPMX19_04813 at 217.735 kb on - strand, within MPMX19_04813 at 217.735 kb on - strand, within MPMX19_04813 at 217.735 kb on - strand, within MPMX19_04813 at 217.735 kb on - strand, within MPMX19_04813 at 217.735 kb on - strand, within MPMX19_04813 at 217.735 kb on - strand, within MPMX19_04813 at 217.735 kb on - strand, within MPMX19_04813 at 217.735 kb on - strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.764 kb on + strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.765 kb on - strand, within MPMX19_04813 at 217.988 kb on + strand at 217.988 kb on + strand at 218.116 kb on + strand at 218.116 kb on + strand at 218.116 kb on + strand at 218.116 kb on + strand at 218.116 kb on + strand at 218.116 kb on + strand at 218.166 kb on + strand at 218.166 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 216,327 + MPMX19_04812 0.14 -0.5 216,327 + MPMX19_04812 0.14 +0.1 216,327 + MPMX19_04812 0.14 -0.9 216,327 + MPMX19_04812 0.14 -0.2 216,327 + MPMX19_04812 0.14 -1.4 216,327 + MPMX19_04812 0.14 -0.5 216,327 + MPMX19_04812 0.14 +0.2 216,327 + MPMX19_04812 0.14 -0.4 216,327 + MPMX19_04812 0.14 -3.4 216,328 - MPMX19_04812 0.14 +0.7 216,328 - MPMX19_04812 0.14 +0.4 216,328 - MPMX19_04812 0.14 -0.5 216,328 - MPMX19_04812 0.14 -0.7 216,328 - MPMX19_04812 0.14 -0.6 216,328 - MPMX19_04812 0.14 +1.1 216,711 + MPMX19_04812 0.67 +0.1 216,711 + MPMX19_04812 0.67 -1.0 216,711 + MPMX19_04812 0.67 -0.4 216,712 - MPMX19_04812 0.68 +0.3 216,768 + MPMX19_04812 0.75 -2.0 216,768 + MPMX19_04812 0.75 +1.3 216,768 + MPMX19_04812 0.75 +0.1 216,769 - MPMX19_04812 0.75 -0.4 216,769 - MPMX19_04812 0.75 +0.9 216,769 - MPMX19_04812 0.75 -1.5 216,769 - MPMX19_04812 0.75 -1.2 216,978 + -0.2 216,979 - -0.9 216,979 - -0.4 216,979 - +0.5 216,999 + -0.5 217,000 + +0.9 217,000 + -0.3 217,000 + -0.4 217,000 + -0.7 217,000 + +1.7 217,000 + -0.7 217,000 + -1.4 217,000 + +0.2 217,000 + -1.1 217,000 + -2.1 217,000 + +0.3 217,000 + -0.1 217,000 + +0.1 217,000 + -0.9 217,000 + -1.2 217,000 + +0.3 217,000 + -0.5 217,001 - -1.7 217,001 - +1.8 217,001 - -1.4 217,001 - -0.7 217,001 - +1.1 217,001 - +0.6 217,001 - +0.7 217,001 - -1.5 217,001 - -0.2 217,001 - +0.3 217,001 - +0.1 217,001 - -0.9 217,001 - -0.5 217,002 + -0.9 217,002 + +0.4 217,002 + -1.2 217,002 + -0.9 217,002 + +0.8 217,002 + +0.3 217,002 + -1.5 217,002 + -1.5 217,002 + -2.0 217,002 + -0.8 217,002 + -1.7 217,002 + -1.6 217,002 + +1.3 217,002 + -1.4 217,002 + +1.8 217,002 + -0.1 217,002 + -0.7 217,002 + -0.2 217,002 + -0.8 217,002 + +0.1 217,002 + +0.3 217,002 + -0.0 217,003 - -0.4 217,003 - -1.4 217,003 - -0.8 217,003 - -1.1 217,003 - +0.1 217,003 - -0.1 217,003 - +1.1 217,003 - -1.2 217,003 - -0.3 217,003 - -1.6 217,003 - -0.6 217,003 - -1.8 217,003 - +1.3 217,003 - +0.5 217,003 - -1.1 217,003 - +0.1 217,003 - +0.1 217,003 - -1.9 217,003 - +0.3 217,003 - -1.4 217,003 - +1.3 217,003 - -0.2 217,003 - -0.1 217,003 - -1.1 217,003 - +1.1 217,003 - -0.4 217,003 - +0.5 217,003 - -1.2 217,003 - -1.4 217,003 - -1.5 217,028 - -0.3 217,049 + -1.1 217,050 - +1.5 217,087 + -1.5 217,088 - -0.9 217,114 + -0.4 217,114 + -0.7 217,114 + -0.1 217,114 + -1.1 217,114 + -1.2 217,114 + -1.2 217,114 + +0.9 217,114 + -0.5 217,114 + -0.9 217,114 + -0.2 217,114 + +1.5 217,114 + -1.1 217,114 + +0.1 217,115 - -1.6 217,115 - +0.1 217,115 - -0.6 217,115 - -0.8 217,115 - +1.1 217,115 - +0.5 217,115 - -0.1 217,115 - -0.2 217,115 - -0.5 217,115 - -0.9 217,133 + -0.1 217,169 + -0.1 217,169 + +0.3 217,169 + -0.9 217,169 + -0.6 217,169 + -1.2 217,169 + -1.4 217,170 - -0.6 217,170 - -0.7 217,170 - -1.1 217,170 - -0.2 217,170 - -1.8 217,170 - +0.6 217,171 + -1.1 217,171 + -0.6 217,171 + -1.4 217,171 + -0.7 217,171 + +0.1 217,171 + -1.5 217,171 + -0.5 217,171 + -1.1 217,172 - +0.6 217,172 - +1.2 217,172 - -1.6 217,172 - -1.7 217,172 - +0.7 217,172 - -1.1 217,172 - -1.1 217,172 - +0.5 217,172 - -1.5 217,251 - -0.5 217,422 + MPMX19_04813 0.23 -0.1 217,422 + MPMX19_04813 0.23 -0.9 217,422 + MPMX19_04813 0.23 +0.1 217,422 + MPMX19_04813 0.23 -0.6 217,545 + MPMX19_04813 0.38 -1.0 217,545 + MPMX19_04813 0.38 +0.9 217,545 + MPMX19_04813 0.38 -2.4 217,546 - MPMX19_04813 0.39 -0.4 217,546 - MPMX19_04813 0.39 +0.5 217,546 - MPMX19_04813 0.39 +0.1 217,546 - MPMX19_04813 0.39 -0.9 217,668 + MPMX19_04813 0.54 -0.8 217,668 + MPMX19_04813 0.54 -1.2 217,668 + MPMX19_04813 0.54 -0.2 217,668 + MPMX19_04813 0.54 -0.9 217,668 + MPMX19_04813 0.54 -0.4 217,668 + MPMX19_04813 0.54 +0.1 217,668 + MPMX19_04813 0.54 -1.2 217,668 + MPMX19_04813 0.54 -0.7 217,668 + MPMX19_04813 0.54 -0.1 217,668 + MPMX19_04813 0.54 -0.5 217,669 - MPMX19_04813 0.54 -0.7 217,669 - MPMX19_04813 0.54 -0.9 217,669 - MPMX19_04813 0.54 -0.5 217,669 - MPMX19_04813 0.54 -1.2 217,669 - MPMX19_04813 0.54 +0.3 217,669 - MPMX19_04813 0.54 -0.9 217,669 - MPMX19_04813 0.54 -3.1 217,734 + MPMX19_04813 0.63 -2.2 217,734 + MPMX19_04813 0.63 -1.9 217,734 + MPMX19_04813 0.63 -2.1 217,734 + MPMX19_04813 0.63 -0.6 217,734 + MPMX19_04813 0.63 -1.5 217,734 + MPMX19_04813 0.63 -1.4 217,734 + MPMX19_04813 0.63 +0.7 217,734 + MPMX19_04813 0.63 -0.8 217,735 - MPMX19_04813 0.63 +1.2 217,735 - MPMX19_04813 0.63 -0.2 217,735 - MPMX19_04813 0.63 +0.3 217,735 - MPMX19_04813 0.63 +0.5 217,735 - MPMX19_04813 0.63 +0.3 217,735 - MPMX19_04813 0.63 -1.1 217,735 - MPMX19_04813 0.63 -0.7 217,735 - MPMX19_04813 0.63 -1.1 217,735 - MPMX19_04813 0.63 -1.1 217,764 + MPMX19_04813 0.67 -0.9 217,764 + MPMX19_04813 0.67 -1.1 217,764 + MPMX19_04813 0.67 +0.1 217,764 + MPMX19_04813 0.67 +0.7 217,764 + MPMX19_04813 0.67 +2.1 217,764 + MPMX19_04813 0.67 -0.9 217,764 + MPMX19_04813 0.67 -0.2 217,764 + MPMX19_04813 0.67 -0.8 217,764 + MPMX19_04813 0.67 -2.3 217,764 + MPMX19_04813 0.67 -0.4 217,764 + MPMX19_04813 0.67 -1.1 217,764 + MPMX19_04813 0.67 -0.0 217,764 + MPMX19_04813 0.67 -0.2 217,764 + MPMX19_04813 0.67 -0.9 217,764 + MPMX19_04813 0.67 -2.0 217,764 + MPMX19_04813 0.67 +0.8 217,764 + MPMX19_04813 0.67 -1.5 217,764 + MPMX19_04813 0.67 -1.6 217,764 + MPMX19_04813 0.67 -1.1 217,764 + MPMX19_04813 0.67 +0.5 217,765 - MPMX19_04813 0.67 -1.7 217,765 - MPMX19_04813 0.67 +0.2 217,765 - MPMX19_04813 0.67 -0.4 217,765 - MPMX19_04813 0.67 -0.8 217,765 - MPMX19_04813 0.67 +0.8 217,765 - MPMX19_04813 0.67 +1.1 217,765 - MPMX19_04813 0.67 -0.4 217,765 - MPMX19_04813 0.67 -0.1 217,765 - MPMX19_04813 0.67 -0.6 217,765 - MPMX19_04813 0.67 -0.6 217,765 - MPMX19_04813 0.67 -1.4 217,765 - MPMX19_04813 0.67 -0.5 217,765 - MPMX19_04813 0.67 -0.9 217,765 - MPMX19_04813 0.67 +0.1 217,765 - MPMX19_04813 0.67 +0.6 217,765 - MPMX19_04813 0.67 -0.2 217,765 - MPMX19_04813 0.67 +0.4 217,765 - MPMX19_04813 0.67 -0.3 217,765 - MPMX19_04813 0.67 -1.3 217,765 - MPMX19_04813 0.67 -0.9 217,988 + -0.5 217,988 + -1.4 218,116 + -0.4 218,116 + +0.1 218,116 + -1.3 218,116 + -0.2 218,116 + +0.1 218,116 + -0.1 218,166 + -0.5 218,166 + -0.2
Or see this region's nucleotide sequence