Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04743

Experiment: NL-CCM, start OD=0.3

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_04742 and MPMX19_04743 overlap by 10 nucleotidesMPMX19_04743 and MPMX19_04744 overlap by 4 nucleotides MPMX19_04742: MPMX19_04742 - Formyltransferase/hydrolase complex Fhc subunit A, at 133,346 to 135,034 _04742 MPMX19_04743: MPMX19_04743 - Formyltransferase/hydrolase complex subunit D, at 135,025 to 135,930 _04743 MPMX19_04744: MPMX19_04744 - Formyltransferase/hydrolase complex Fhc subunit C, at 135,927 to 136,736 _04744 Position (kb) 135 136Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 134.168 kb on + strand, within MPMX19_04742at 134.168 kb on + strand, within MPMX19_04742at 134.168 kb on + strand, within MPMX19_04742at 134.168 kb on + strand, within MPMX19_04742at 134.168 kb on + strand, within MPMX19_04742at 134.168 kb on + strand, within MPMX19_04742at 134.168 kb on + strand, within MPMX19_04742at 134.169 kb on - strand, within MPMX19_04742at 134.169 kb on - strand, within MPMX19_04742at 134.169 kb on - strand, within MPMX19_04742at 134.169 kb on - strand, within MPMX19_04742at 134.169 kb on - strand, within MPMX19_04742at 134.169 kb on - strand, within MPMX19_04742at 134.169 kb on - strand, within MPMX19_04742at 134.483 kb on + strand, within MPMX19_04742at 134.483 kb on + strand, within MPMX19_04742at 134.483 kb on + strand, within MPMX19_04742at 134.483 kb on + strand, within MPMX19_04742at 134.483 kb on + strand, within MPMX19_04742at 134.483 kb on + strand, within MPMX19_04742at 134.484 kb on - strand, within MPMX19_04742at 134.484 kb on - strand, within MPMX19_04742at 134.484 kb on - strand, within MPMX19_04742at 134.484 kb on - strand, within MPMX19_04742at 134.484 kb on - strand, within MPMX19_04742at 134.484 kb on - strand, within MPMX19_04742at 134.484 kb on - strand, within MPMX19_04742at 134.525 kb on + strand, within MPMX19_04742at 134.525 kb on + strand, within MPMX19_04742at 134.525 kb on + strand, within MPMX19_04742at 134.525 kb on + strand, within MPMX19_04742at 134.526 kb on - strand, within MPMX19_04742at 134.526 kb on - strand, within MPMX19_04742at 134.526 kb on - strand, within MPMX19_04742at 134.636 kb on + strand, within MPMX19_04742at 134.637 kb on - strand, within MPMX19_04742at 134.694 kb on + strand, within MPMX19_04742at 134.744 kb on + strand, within MPMX19_04742at 134.744 kb on + strand, within MPMX19_04742at 134.744 kb on + strand, within MPMX19_04742at 134.744 kb on + strand, within MPMX19_04742at 134.744 kb on + strand, within MPMX19_04742at 134.745 kb on - strand, within MPMX19_04742at 134.745 kb on - strand, within MPMX19_04742at 134.745 kb on - strand, within MPMX19_04742at 134.745 kb on - strand, within MPMX19_04742at 135.046 kb on - strandat 135.058 kb on + strandat 135.058 kb on + strandat 135.058 kb on + strandat 135.058 kb on + strandat 135.059 kb on - strandat 135.059 kb on - strandat 135.059 kb on - strandat 135.059 kb on - strandat 135.059 kb on - strandat 135.059 kb on - strandat 135.059 kb on - strandat 135.059 kb on - strandat 135.059 kb on - strandat 135.059 kb on - strandat 135.059 kb on - strandat 135.059 kb on - strandat 135.059 kb on - strandat 135.059 kb on - strandat 135.445 kb on + strand, within MPMX19_04743at 135.445 kb on + strand, within MPMX19_04743at 135.445 kb on + strand, within MPMX19_04743at 135.446 kb on - strand, within MPMX19_04743at 135.446 kb on - strand, within MPMX19_04743at 135.664 kb on + strand, within MPMX19_04743at 135.664 kb on + strand, within MPMX19_04743at 135.664 kb on + strand, within MPMX19_04743at 135.664 kb on + strand, within MPMX19_04743at 135.665 kb on - strand, within MPMX19_04743at 135.665 kb on - strand, within MPMX19_04743at 135.665 kb on - strand, within MPMX19_04743at 135.665 kb on - strand, within MPMX19_04743at 135.697 kb on + strand, within MPMX19_04743at 135.698 kb on - strand, within MPMX19_04743at 135.877 kb on + strandat 136.446 kb on + strand, within MPMX19_04744at 136.789 kb on + strandat 136.789 kb on + strandat 136.789 kb on + strandat 136.789 kb on + strandat 136.790 kb on - strandat 136.796 kb on + strandat 136.902 kb on + strandat 136.902 kb on + strandat 136.903 kb on - strandat 136.903 kb on - strandat 136.903 kb on - strandat 136.903 kb on - strandat 136.903 kb on - strandat 136.903 kb on - strandat 136.903 kb on - strandat 136.903 kb on - strandat 136.903 kb on - strandat 136.903 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3
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134,168 + MPMX19_04742 0.49 +1.8
134,168 + MPMX19_04742 0.49 +0.7
134,168 + MPMX19_04742 0.49 -0.9
134,168 + MPMX19_04742 0.49 -0.0
134,168 + MPMX19_04742 0.49 +1.2
134,168 + MPMX19_04742 0.49 -1.9
134,168 + MPMX19_04742 0.49 +1.5
134,169 - MPMX19_04742 0.49 -0.1
134,169 - MPMX19_04742 0.49 -0.3
134,169 - MPMX19_04742 0.49 -2.3
134,169 - MPMX19_04742 0.49 +1.7
134,169 - MPMX19_04742 0.49 -1.3
134,169 - MPMX19_04742 0.49 +1.4
134,169 - MPMX19_04742 0.49 -0.2
134,483 + MPMX19_04742 0.67 +0.1
134,483 + MPMX19_04742 0.67 +1.2
134,483 + MPMX19_04742 0.67 +0.7
134,483 + MPMX19_04742 0.67 -2.2
134,483 + MPMX19_04742 0.67 +0.6
134,483 + MPMX19_04742 0.67 -0.1
134,484 - MPMX19_04742 0.67 -0.8
134,484 - MPMX19_04742 0.67 -0.1
134,484 - MPMX19_04742 0.67 -1.5
134,484 - MPMX19_04742 0.67 +0.5
134,484 - MPMX19_04742 0.67 -0.6
134,484 - MPMX19_04742 0.67 +0.5
134,484 - MPMX19_04742 0.67 -0.3
134,525 + MPMX19_04742 0.70 +0.7
134,525 + MPMX19_04742 0.70 -1.3
134,525 + MPMX19_04742 0.70 -0.9
134,525 + MPMX19_04742 0.70 +0.2
134,526 - MPMX19_04742 0.70 +1.1
134,526 - MPMX19_04742 0.70 +1.1
134,526 - MPMX19_04742 0.70 -0.1
134,636 + MPMX19_04742 0.76 -2.2
134,637 - MPMX19_04742 0.76 +0.1
134,694 + MPMX19_04742 0.80 -0.6
134,744 + MPMX19_04742 0.83 -0.1
134,744 + MPMX19_04742 0.83 +0.4
134,744 + MPMX19_04742 0.83 -1.4
134,744 + MPMX19_04742 0.83 +0.4
134,744 + MPMX19_04742 0.83 -1.1
134,745 - MPMX19_04742 0.83 -1.6
134,745 - MPMX19_04742 0.83 -2.3
134,745 - MPMX19_04742 0.83 -0.6
134,745 - MPMX19_04742 0.83 +0.2
135,046 - -0.8
135,058 + -1.1
135,058 + +0.1
135,058 + +1.2
135,058 + +0.3
135,059 - -0.8
135,059 - -0.1
135,059 - -0.6
135,059 - -1.1
135,059 - +0.2
135,059 - -2.2
135,059 - -0.8
135,059 - -0.3
135,059 - -3.3
135,059 - +1.6
135,059 - +0.2
135,059 - +0.1
135,059 - +1.4
135,059 - +0.3
135,445 + MPMX19_04743 0.46 -1.3
135,445 + MPMX19_04743 0.46 +0.5
135,445 + MPMX19_04743 0.46 +1.1
135,446 - MPMX19_04743 0.46 -0.5
135,446 - MPMX19_04743 0.46 +1.3
135,664 + MPMX19_04743 0.71 +0.5
135,664 + MPMX19_04743 0.71 -0.9
135,664 + MPMX19_04743 0.71 -0.6
135,664 + MPMX19_04743 0.71 -2.3
135,665 - MPMX19_04743 0.71 +0.5
135,665 - MPMX19_04743 0.71 -0.5
135,665 - MPMX19_04743 0.71 -1.3
135,665 - MPMX19_04743 0.71 -0.5
135,697 + MPMX19_04743 0.74 +0.6
135,698 - MPMX19_04743 0.74 +2.1
135,877 + +1.1
136,446 + MPMX19_04744 0.64 -2.5
136,789 + -0.4
136,789 + +1.5
136,789 + -1.6
136,789 + -0.2
136,790 - -0.8
136,796 + +0.5
136,902 + -2.5
136,902 + +0.7
136,903 - +0.2
136,903 - -0.5
136,903 - +0.7
136,903 - +0.9
136,903 - -0.9
136,903 - -0.8
136,903 - -0.3
136,903 - -0.4
136,903 - -1.1
136,903 - -1.2

Or see this region's nucleotide sequence