Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04720

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
107,885	+		MPMX19_04719	0.19	-0.5
107,885	+		MPMX19_04719	0.19	+1.2
107,886	-		MPMX19_04719	0.19	-1.2
107,886	-		MPMX19_04719	0.19	-0.8
107,886	-		MPMX19_04719	0.19	+0.8
108,347	+		MPMX19_04719	0.60	-1.2
108,347	+		MPMX19_04719	0.60	+3.1
108,347	+		MPMX19_04719	0.60	-0.5
108,347	+		MPMX19_04719	0.60	-2.1
108,347	+		MPMX19_04719	0.60	+1.0
108,347	+		MPMX19_04719	0.60	-0.7
108,347	+		MPMX19_04719	0.60	-0.9
108,347	+		MPMX19_04719	0.60	-0.5
108,347	+		MPMX19_04719	0.60	+0.4
108,347	+		MPMX19_04719	0.60	-1.4
108,347	+		MPMX19_04719	0.60	-0.9
108,347	+		MPMX19_04719	0.60	-1.5
108,347	+		MPMX19_04719	0.60	+0.2
108,348	-		MPMX19_04719	0.60	-0.1
108,348	-		MPMX19_04719	0.60	+0.7
108,348	-		MPMX19_04719	0.60	-0.2
108,348	-		MPMX19_04719	0.60	-2.1
108,348	-		MPMX19_04719	0.60	-0.3
108,348	-		MPMX19_04719	0.60	-0.9
108,348	-		MPMX19_04719	0.60	+0.1
108,348	-		MPMX19_04719	0.60	-1.4
108,348	-		MPMX19_04719	0.60	-0.0
108,348	-		MPMX19_04719	0.60	-0.0
108,348	-		MPMX19_04719	0.60	-0.3
108,348	-		MPMX19_04719	0.60	-1.5
108,348	-		MPMX19_04719	0.60	+0.7
108,348	-		MPMX19_04719	0.60	-0.2
108,795	-				-0.9
108,841	+				+1.1
108,842	-				-0.3
108,842	-				+0.7
108,842	-				-1.3
108,842	-				+1.0
109,189	+		MPMX19_04720	0.27	+1.1
109,189	+		MPMX19_04720	0.27	-0.5
109,189	+		MPMX19_04720	0.27	-0.5
109,189	+		MPMX19_04720	0.27	+1.1
109,189	+		MPMX19_04720	0.27	-0.7
109,189	+		MPMX19_04720	0.27	-1.4
109,189	+		MPMX19_04720	0.27	-0.5
109,189	+		MPMX19_04720	0.27	-0.9
109,189	+		MPMX19_04720	0.27	-0.9
109,189	+		MPMX19_04720	0.27	-0.3
109,190	-		MPMX19_04720	0.27	+0.1
109,190	-		MPMX19_04720	0.27	-0.3
109,190	-		MPMX19_04720	0.27	-1.5
109,190	-		MPMX19_04720	0.27	+0.5
109,190	-		MPMX19_04720	0.27	+1.5
109,190	-		MPMX19_04720	0.27	-1.3
109,252	+		MPMX19_04720	0.33	-0.5
109,252	+		MPMX19_04720	0.33	-0.5
109,253	-		MPMX19_04720	0.33	+0.8
109,253	-		MPMX19_04720	0.33	-1.4
109,253	-		MPMX19_04720	0.33	+0.2
109,253	-		MPMX19_04720	0.33	-3.2
109,253	-		MPMX19_04720	0.33	-0.7
109,273	+		MPMX19_04720	0.34	-0.1
109,273	+		MPMX19_04720	0.34	+0.5
109,273	+		MPMX19_04720	0.34	-0.8
109,274	-		MPMX19_04720	0.34	+0.5
109,274	-		MPMX19_04720	0.34	+0.2
109,364	-		MPMX19_04720	0.42	-1.6
109,364	-		MPMX19_04720	0.42	+0.1
109,423	+		MPMX19_04720	0.47	-0.0
109,423	+		MPMX19_04720	0.47	+0.2
109,423	+		MPMX19_04720	0.47	+0.1
109,423	+		MPMX19_04720	0.47	+0.2
109,423	+		MPMX19_04720	0.47	-0.1
109,423	+		MPMX19_04720	0.47	-1.4
109,423	+		MPMX19_04720	0.47	-1.4
109,423	+		MPMX19_04720	0.47	-0.9
109,424	-		MPMX19_04720	0.47	-0.6
109,424	-		MPMX19_04720	0.47	-1.2
109,424	-		MPMX19_04720	0.47	-2.3
109,424	-		MPMX19_04720	0.47	+0.2
109,424	-		MPMX19_04720	0.47	-1.5
109,424	-		MPMX19_04720	0.47	-0.8
109,424	-		MPMX19_04720	0.47	-0.2
109,424	-		MPMX19_04720	0.47	+0.2
109,424	-		MPMX19_04720	0.47	-1.1
109,424	-		MPMX19_04720	0.47	-0.9
109,424	-		MPMX19_04720	0.47	-0.9
109,424	-		MPMX19_04720	0.47	-0.5
109,424	-		MPMX19_04720	0.47	-1.3
109,424	-		MPMX19_04720	0.47	-0.8
109,424	-		MPMX19_04720	0.47	-0.6
109,424	-		MPMX19_04720	0.47	-0.5
109,424	-		MPMX19_04720	0.47	-0.8
109,756	+		MPMX19_04720	0.75	+0.2
109,756	+		MPMX19_04720	0.75	-1.9
109,756	+		MPMX19_04720	0.75	-0.8
109,756	+		MPMX19_04720	0.75	-1.9
109,756	+		MPMX19_04720	0.75	+0.5
109,756	+		MPMX19_04720	0.75	+0.7
109,756	+		MPMX19_04720	0.75	+0.7
109,756	+		MPMX19_04720	0.75	-1.1
109,756	+		MPMX19_04720	0.75	-0.1
109,757	-		MPMX19_04720	0.75	-0.8
109,757	-		MPMX19_04720	0.75	-1.0
109,757	-		MPMX19_04720	0.75	-1.6
109,757	-		MPMX19_04720	0.75	+0.5
109,757	-		MPMX19_04720	0.75	-1.1
109,757	-		MPMX19_04720	0.75	+1.2
109,757	-		MPMX19_04720	0.75	-0.6
109,757	-		MPMX19_04720	0.75	+0.1
109,757	-		MPMX19_04720	0.75	-0.4
109,757	-		MPMX19_04720	0.75	-2.8
109,757	-		MPMX19_04720	0.75	-0.9
109,757	-		MPMX19_04720	0.75	-0.3
109,757	-		MPMX19_04720	0.75	-1.2
109,757	-		MPMX19_04720	0.75	-1.1
109,757	-		MPMX19_04720	0.75	-1.1
109,757	-		MPMX19_04720	0.75	-1.1
109,757	-		MPMX19_04720	0.75	-0.9
109,757	-		MPMX19_04720	0.75	+1.1
109,757	-		MPMX19_04720	0.75	-0.4
109,757	-		MPMX19_04720	0.75	-0.4
109,759	+		MPMX19_04720	0.75	-1.1
109,760	-		MPMX19_04720	0.75	+0.9
109,781	-		MPMX19_04720	0.77	-1.5
110,068	+				+1.2
110,068	+				-1.0
110,068	+				+1.5
110,068	+				-0.8
110,068	+				-0.0
110,069	-				-0.3
110,069	-				+0.2
110,094	+				-0.2
110,095	-				+1.1
110,096	+				-0.4
110,096	+				-0.6
110,096	+				+0.5
110,096	+				-0.3
110,097	-				-0.1
110,097	-				+0.1
110,349	+				+1.5
110,349	+				+0.3
110,358	+				+0.5
110,359	-				+0.1
110,682	+		MPMX19_04721	0.22	+0.5
110,683	-		MPMX19_04721	0.22	-0.4
110,802	+		MPMX19_04721	0.28	+0.5
110,803	-		MPMX19_04721	0.28	+0.2
110,880	+		MPMX19_04721	0.32	-1.8
110,880	+		MPMX19_04721	0.32	+0.1
110,880	+		MPMX19_04721	0.32	-2.7
110,880	+		MPMX19_04721	0.32	-0.6
110,880	+		MPMX19_04721	0.32	-0.5
110,880	+		MPMX19_04721	0.32	-0.0
110,880	+		MPMX19_04721	0.32	-0.5
110,880	+		MPMX19_04721	0.32	-1.9
110,880	+		MPMX19_04721	0.32	+0.5
110,880	+		MPMX19_04721	0.32	-2.2
110,881	-		MPMX19_04721	0.32	-3.4
110,881	-		MPMX19_04721	0.32	-1.4
110,881	-		MPMX19_04721	0.32	-0.1
110,881	-		MPMX19_04721	0.32	+1.1
110,881	-		MPMX19_04721	0.32	-0.1
110,881	-		MPMX19_04721	0.32	+0.1
110,881	-		MPMX19_04721	0.32	+1.2
110,881	-		MPMX19_04721	0.32	+2.1
110,881	-		MPMX19_04721	0.32	-1.5
110,881	-		MPMX19_04721	0.32	-0.8
110,881	-		MPMX19_04721	0.32	+1.5
110,881	-		MPMX19_04721	0.32	+0.1
110,881	-		MPMX19_04721	0.32	+0.1
110,964	+		MPMX19_04721	0.36	+1.4
110,964	+		MPMX19_04721	0.36	+2.5
110,964	+		MPMX19_04721	0.36	-0.5
110,964	+		MPMX19_04721	0.36	-0.3
110,964	+		MPMX19_04721	0.36	+0.5
110,964	+		MPMX19_04721	0.36	-0.0
110,965	-		MPMX19_04721	0.36	-0.3
110,965	-		MPMX19_04721	0.36	-0.9
110,965	-		MPMX19_04721	0.36	-0.3