Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04661

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
47,116	+				+0.5
47,116	+				+2.4
47,116	+				-1.4
47,117	-				+0.2
47,117	-				-1.4
47,194	+		MPMX19_04660	0.18	-1.5
47,194	+		MPMX19_04660	0.18	-1.5
47,194	+		MPMX19_04660	0.18	+0.5
47,194	+		MPMX19_04660	0.18	-0.8
47,194	+		MPMX19_04660	0.18	-0.6
47,194	+		MPMX19_04660	0.18	+0.5
47,194	+		MPMX19_04660	0.18	+0.7
47,194	+		MPMX19_04660	0.18	-1.1
47,194	+		MPMX19_04660	0.18	+1.6
47,194	+		MPMX19_04660	0.18	+0.5
47,194	+		MPMX19_04660	0.18	+1.1
47,194	+		MPMX19_04660	0.18	-0.2
47,194	+		MPMX19_04660	0.18	-1.0
47,195	-		MPMX19_04660	0.18	-0.5
47,195	-		MPMX19_04660	0.18	+0.2
47,195	-		MPMX19_04660	0.18	+0.2
47,195	-		MPMX19_04660	0.18	-1.1
47,195	-		MPMX19_04660	0.18	-1.3
47,195	-		MPMX19_04660	0.18	-1.3
47,195	-		MPMX19_04660	0.18	-0.5
47,195	-		MPMX19_04660	0.18	-0.8
47,195	-		MPMX19_04660	0.18	-0.3
47,503	+		MPMX19_04660	0.59	+0.6
47,503	+		MPMX19_04660	0.59	-0.3
47,503	+		MPMX19_04660	0.59	-0.8
47,504	-		MPMX19_04660	0.59	-1.3
47,567	+		MPMX19_04660	0.68	-0.5
47,567	+		MPMX19_04660	0.68	+0.5
47,858	-				-0.9
48,080	+		MPMX19_04661	0.29	+0.3
48,080	+		MPMX19_04661	0.29	-0.9
48,081	-		MPMX19_04661	0.29	+1.2
48,101	+		MPMX19_04661	0.31	-2.3
48,101	+		MPMX19_04661	0.31	+1.1
48,101	+		MPMX19_04661	0.31	-0.9
48,101	+		MPMX19_04661	0.31	-0.4
48,101	+		MPMX19_04661	0.31	-1.0
48,110	+		MPMX19_04661	0.32	+0.7
48,110	+		MPMX19_04661	0.32	-0.5
48,110	+		MPMX19_04661	0.32	-0.1
48,110	+		MPMX19_04661	0.32	-0.3
48,110	+		MPMX19_04661	0.32	-1.6
48,110	+		MPMX19_04661	0.32	+0.5
48,110	+		MPMX19_04661	0.32	-0.4
48,110	+		MPMX19_04661	0.32	+0.5
48,111	-		MPMX19_04661	0.32	+1.2
48,111	-		MPMX19_04661	0.32	-2.9
48,111	-		MPMX19_04661	0.32	+0.6
48,111	-		MPMX19_04661	0.32	-1.3
48,111	-		MPMX19_04661	0.32	-0.5
48,111	-		MPMX19_04661	0.32	+0.3
48,119	+		MPMX19_04661	0.33	-1.3
48,119	+		MPMX19_04661	0.33	+0.7
48,119	+		MPMX19_04661	0.33	+0.3
48,119	+		MPMX19_04661	0.33	-0.4
48,119	+		MPMX19_04661	0.33	-0.4
48,119	+		MPMX19_04661	0.33	-0.0
48,119	+		MPMX19_04661	0.33	-0.4
48,120	-		MPMX19_04661	0.33	+1.6
48,120	-		MPMX19_04661	0.33	+0.6
48,120	-		MPMX19_04661	0.33	-0.0
48,120	-		MPMX19_04661	0.33	-0.9
48,314	+		MPMX19_04661	0.52	-0.1
48,314	+		MPMX19_04661	0.52	-0.4
48,314	+		MPMX19_04661	0.52	+1.3
48,315	-		MPMX19_04661	0.52	+0.8
48,315	-		MPMX19_04661	0.52	-0.0
48,315	-		MPMX19_04661	0.52	+0.7
48,458	+		MPMX19_04661	0.66	-1.6
48,459	-		MPMX19_04661	0.67	-2.6
48,459	-		MPMX19_04661	0.67	-1.1
48,459	-		MPMX19_04661	0.67	-1.0
48,564	-		MPMX19_04661	0.77	-0.6
48,590	+		MPMX19_04661	0.80	-0.6
48,590	+		MPMX19_04661	0.80	-0.6
48,590	+		MPMX19_04661	0.80	+0.8
48,590	+		MPMX19_04661	0.80	-0.3
48,591	-		MPMX19_04661	0.80	-0.7
48,591	-		MPMX19_04661	0.80	-0.4
48,591	-		MPMX19_04661	0.80	+1.5
48,591	-		MPMX19_04661	0.80	-0.7
48,591	-		MPMX19_04661	0.80	-1.1
48,591	-		MPMX19_04661	0.80	-0.4
48,591	-		MPMX19_04661	0.80	-0.3
48,591	-		MPMX19_04661	0.80	-1.1
48,591	-		MPMX19_04661	0.80	+1.4
48,591	-		MPMX19_04661	0.80	+1.2
48,591	-		MPMX19_04661	0.80	+0.3
48,591	-		MPMX19_04661	0.80	+0.1
49,018	+		MPMX19_04662	0.26	-0.9
49,018	+		MPMX19_04662	0.26	+1.5
49,018	+		MPMX19_04662	0.26	-1.4
49,018	+		MPMX19_04662	0.26	-0.9
49,018	+		MPMX19_04662	0.26	-0.2
49,018	+		MPMX19_04662	0.26	+0.7
49,019	-		MPMX19_04662	0.26	+0.8
49,019	-		MPMX19_04662	0.26	+0.7
49,019	-		MPMX19_04662	0.26	-1.9
49,019	-		MPMX19_04662	0.26	-0.4
49,019	-		MPMX19_04662	0.26	-0.4
49,019	-		MPMX19_04662	0.26	-2.0
49,087	+		MPMX19_04662	0.34	+0.2
49,087	+		MPMX19_04662	0.34	+0.6
49,087	+		MPMX19_04662	0.34	+0.1
49,087	+		MPMX19_04662	0.34	+1.3
49,087	+		MPMX19_04662	0.34	-0.3
49,087	+		MPMX19_04662	0.34	-0.5
49,087	+		MPMX19_04662	0.34	-0.6
49,087	+		MPMX19_04662	0.34	-1.3
49,088	-		MPMX19_04662	0.34	-1.3
49,088	-		MPMX19_04662	0.34	-1.9
49,088	-		MPMX19_04662	0.34	-1.0
49,088	-		MPMX19_04662	0.34	-0.6
49,088	-		MPMX19_04662	0.34	-1.1
49,088	-		MPMX19_04662	0.34	-0.1
49,088	-		MPMX19_04662	0.34	-1.6
49,237	+		MPMX19_04662	0.51	-1.6
49,237	+		MPMX19_04662	0.51	+0.5
49,238	-		MPMX19_04662	0.51	+1.9
49,238	-		MPMX19_04662	0.51	-0.3
49,238	-		MPMX19_04662	0.51	-0.8
49,280	-		MPMX19_04662	0.56	-1.8
49,280	-		MPMX19_04662	0.56	+0.2
49,280	-		MPMX19_04662	0.56	+0.7
49,280	-		MPMX19_04662	0.56	-1.1
49,424	-		MPMX19_04662	0.73	-1.4
49,468	+		MPMX19_04662	0.78	-0.9
49,468	+		MPMX19_04662	0.78	-1.1
49,468	+		MPMX19_04662	0.78	-0.4
49,468	+		MPMX19_04662	0.78	-0.8
49,567	+		MPMX19_04662	0.89	-0.1
49,567	+		MPMX19_04662	0.89	+0.9
49,567	+		MPMX19_04662	0.89	-1.5
49,567	+		MPMX19_04662	0.89	-1.1
49,568	-		MPMX19_04662	0.89	+0.6
49,568	-		MPMX19_04662	0.89	-1.9
49,600	+				-1.1
49,600	+				-0.1
49,600	+				+0.5
49,600	+				-1.5
49,601	-				-0.4
49,601	-				-0.9
49,601	-				-0.8
49,601	-				+1.8
49,601	-				-0.1
49,657	+				+0.1
49,657	+				-0.9
49,657	+				-0.8
49,657	+				+0.5
49,657	+				+0.1
49,657	+				-0.3
49,657	+				+0.5
49,657	+				+0.2
49,657	+				-0.9
49,657	+				-0.5
49,657	+				-0.4
49,657	+				+0.7
49,657	+				-0.8
49,657	+				-0.6
49,657	+				-0.4
49,657	+				-0.4
49,657	+				-0.9
49,657	+				-0.2
49,657	+				-1.5
49,658	-				-0.3
49,658	-				-0.3
49,658	-				-0.4
49,658	-				+0.7
49,658	-				-0.5
49,658	-				-0.6
49,658	-				-0.8
49,658	-				+1.1
49,658	-				-0.4
49,658	-				-2.9
49,658	-				+0.6
49,658	-				+0.5
49,658	-				-1.8
49,658	-				+0.0
49,658	-				+0.3
49,658	-				-1.4
49,658	-				+0.9
49,658	-				+0.2
49,658	-				-1.7