Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04633

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
9,611	+		MPMX19_04632	0.17	+0.5
9,611	+		MPMX19_04632	0.17	+0.3
9,611	+		MPMX19_04632	0.17	-0.5
9,611	+		MPMX19_04632	0.17	-1.1
9,611	+		MPMX19_04632	0.17	-0.6
9,611	+		MPMX19_04632	0.17	+0.1
9,611	+		MPMX19_04632	0.17	-0.3
9,612	-		MPMX19_04632	0.17	-0.9
9,612	-		MPMX19_04632	0.17	-1.1
9,612	-		MPMX19_04632	0.17	+0.7
9,620	+		MPMX19_04632	0.17	+1.3
9,620	+		MPMX19_04632	0.17	+0.3
9,620	+		MPMX19_04632	0.17	-0.2
9,620	+		MPMX19_04632	0.17	-0.3
9,620	+		MPMX19_04632	0.17	-0.1
9,621	-		MPMX19_04632	0.17	-0.1
9,621	-		MPMX19_04632	0.17	-0.8
9,668	+		MPMX19_04632	0.21	-0.3
9,669	-		MPMX19_04632	0.22	-0.3
9,669	-		MPMX19_04632	0.22	-1.0
9,743	+		MPMX19_04632	0.28	-0.5
9,744	-		MPMX19_04632	0.28	-1.3
9,744	-		MPMX19_04632	0.28	-0.3
9,744	-		MPMX19_04632	0.28	+0.5
9,744	-		MPMX19_04632	0.28	+0.1
9,764	+		MPMX19_04632	0.30	-0.2
9,764	+		MPMX19_04632	0.30	+0.2
9,764	+		MPMX19_04632	0.30	+0.7
9,764	+		MPMX19_04632	0.30	-0.3
9,764	+		MPMX19_04632	0.30	-0.1
9,764	+		MPMX19_04632	0.30	-1.1
9,764	+		MPMX19_04632	0.30	-1.1
9,764	+		MPMX19_04632	0.30	-0.5
9,764	+		MPMX19_04632	0.30	-0.2
9,765	-		MPMX19_04632	0.30	+0.1
9,765	-		MPMX19_04632	0.30	-1.9
9,765	-		MPMX19_04632	0.30	+0.5
9,765	-		MPMX19_04632	0.30	-0.1
9,765	-		MPMX19_04632	0.30	-0.3
9,765	-		MPMX19_04632	0.30	+0.6
9,765	-		MPMX19_04632	0.30	+0.5
9,765	-		MPMX19_04632	0.30	+0.0
9,765	-		MPMX19_04632	0.30	-0.5
9,765	-		MPMX19_04632	0.30	-0.8
9,779	+		MPMX19_04632	0.31	+1.3
9,780	-		MPMX19_04632	0.31	+0.8
9,788	+		MPMX19_04632	0.32	-1.2
9,788	+		MPMX19_04632	0.32	+1.7
9,788	+		MPMX19_04632	0.32	-1.6
9,789	-		MPMX19_04632	0.32	-0.3
9,789	-		MPMX19_04632	0.32	-1.1
9,789	-		MPMX19_04632	0.32	-1.1
9,830	+		MPMX19_04632	0.35	-0.5
9,830	+		MPMX19_04632	0.35	-2.1
9,830	+		MPMX19_04632	0.35	-0.5
9,830	+		MPMX19_04632	0.35	-0.9
9,830	+		MPMX19_04632	0.35	+0.9
9,830	+		MPMX19_04632	0.35	-1.3
9,831	+		MPMX19_04632	0.35	-0.2
9,831	-		MPMX19_04632	0.35	+2.1
9,831	-		MPMX19_04632	0.35	+1.2
9,831	-		MPMX19_04632	0.35	-0.3
9,831	-		MPMX19_04632	0.35	-0.6
9,831	-		MPMX19_04632	0.35	-1.1
9,831	-		MPMX19_04632	0.35	-1.4
9,932	+		MPMX19_04632	0.44	-0.3
9,932	+		MPMX19_04632	0.44	-0.5
9,932	+		MPMX19_04632	0.44	-2.6
9,933	-		MPMX19_04632	0.44	-1.1
10,025	+		MPMX19_04632	0.52	-0.4
10,025	+		MPMX19_04632	0.52	-0.4
10,025	+		MPMX19_04632	0.52	-0.9
10,025	+		MPMX19_04632	0.52	+0.1
10,025	+		MPMX19_04632	0.52	-2.1
10,026	-		MPMX19_04632	0.52	+1.1
10,026	-		MPMX19_04632	0.52	+1.1
10,026	-		MPMX19_04632	0.52	+0.6
10,026	-		MPMX19_04632	0.52	-0.9
10,026	-		MPMX19_04632	0.52	-1.5
10,026	-		MPMX19_04632	0.52	-0.3
10,026	-		MPMX19_04632	0.52	-0.8
10,052	+		MPMX19_04632	0.54	+0.3
10,052	+		MPMX19_04632	0.54	-0.9
10,053	-		MPMX19_04632	0.54	-3.2
10,053	-		MPMX19_04632	0.54	+0.6
10,053	-		MPMX19_04632	0.54	+0.2
10,208	+		MPMX19_04632	0.68	-0.9
10,208	+		MPMX19_04632	0.68	+0.2
10,208	+		MPMX19_04632	0.68	-0.3
10,208	+		MPMX19_04632	0.68	-2.6
10,208	+		MPMX19_04632	0.68	-0.2
10,208	+		MPMX19_04632	0.68	-1.2
10,208	+		MPMX19_04632	0.68	-0.1
10,208	+		MPMX19_04632	0.68	+0.2
10,208	+		MPMX19_04632	0.68	+0.5
10,208	+		MPMX19_04632	0.68	-0.0
10,208	+		MPMX19_04632	0.68	+0.7
10,208	+		MPMX19_04632	0.68	+2.1
10,208	+		MPMX19_04632	0.68	-0.3
10,209	-		MPMX19_04632	0.68	-1.0
10,209	-		MPMX19_04632	0.68	-0.9
10,690	+		MPMX19_04633	0.10	-0.3
10,691	-		MPMX19_04633	0.10	-1.3
10,875	+		MPMX19_04633	0.29	-0.6
10,875	+		MPMX19_04633	0.29	+0.4
10,875	+		MPMX19_04633	0.29	+1.1
10,876	-		MPMX19_04633	0.29	-0.4
10,876	-		MPMX19_04633	0.29	+1.1
10,876	-		MPMX19_04633	0.29	+0.2
10,876	-		MPMX19_04633	0.29	-0.6
10,896	+		MPMX19_04633	0.31	+0.3
10,897	-		MPMX19_04633	0.31	+0.1
11,279	-		MPMX19_04633	0.69	+1.5
11,279	-		MPMX19_04633	0.69	+0.1
11,651	+				-0.9
11,674	+				+0.1
11,674	+				+1.1
11,675	-				+1.3
11,675	-				-1.3
11,884	-		MPMX19_04634	0.19	+0.5
11,884	-		MPMX19_04634	0.19	-1.1
11,967	+		MPMX19_04634	0.25	-0.9
11,967	+		MPMX19_04634	0.25	-0.6
11,967	+		MPMX19_04634	0.25	-1.3
11,968	-		MPMX19_04634	0.25	-1.3
11,994	+		MPMX19_04634	0.26	+0.7
11,994	+		MPMX19_04634	0.26	-1.2
11,995	-		MPMX19_04634	0.27	-0.3
12,030	+		MPMX19_04634	0.29	-1.3
12,030	+		MPMX19_04634	0.29	-0.8
12,030	+		MPMX19_04634	0.29	-1.6
12,030	+		MPMX19_04634	0.29	+0.8
12,030	+		MPMX19_04634	0.29	-0.2
12,030	+		MPMX19_04634	0.29	-0.6
12,030	+		MPMX19_04634	0.29	-0.5
12,031	-		MPMX19_04634	0.29	-1.5
12,031	-		MPMX19_04634	0.29	-0.3
12,031	-		MPMX19_04634	0.29	-0.3
12,031	-		MPMX19_04634	0.29	-1.1
12,031	-		MPMX19_04634	0.29	-1.5
12,031	-		MPMX19_04634	0.29	-0.0
12,031	-		MPMX19_04634	0.29	-0.8
12,031	-		MPMX19_04634	0.29	-0.8
12,031	-		MPMX19_04634	0.29	-0.8
12,031	-		MPMX19_04634	0.29	-1.2
12,036	+		MPMX19_04634	0.29	-0.1
12,036	+		MPMX19_04634	0.29	-1.1
12,037	-		MPMX19_04634	0.29	+1.1
12,037	-		MPMX19_04634	0.29	-1.4
12,120	+		MPMX19_04634	0.35	-0.0
12,120	+		MPMX19_04634	0.35	-0.7
12,120	+		MPMX19_04634	0.35	-1.4
12,120	+		MPMX19_04634	0.35	-1.0
12,120	+		MPMX19_04634	0.35	-0.8
12,120	+		MPMX19_04634	0.35	-1.9
12,120	+		MPMX19_04634	0.35	+1.1
12,120	+		MPMX19_04634	0.35	-0.6
12,120	+		MPMX19_04634	0.35	+0.7
12,121	-		MPMX19_04634	0.35	+2.4
12,121	-		MPMX19_04634	0.35	-2.2
12,121	-		MPMX19_04634	0.35	-0.4
12,121	-		MPMX19_04634	0.35	-0.3
12,145	-		MPMX19_04634	0.36	-0.5
12,208	-		MPMX19_04634	0.41	-0.3
12,222	+		MPMX19_04634	0.42	-0.9
12,222	+		MPMX19_04634	0.42	-2.1
12,222	+		MPMX19_04634	0.42	+1.4
12,223	-		MPMX19_04634	0.42	-0.3
12,223	-		MPMX19_04634	0.42	-1.1
12,223	-		MPMX19_04634	0.42	-1.3