Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04178 and MPMX19_04179 are separated by 90 nucleotides MPMX19_04179 and MPMX19_04180 are separated by 376 nucleotides
MPMX19_04178: MPMX19_04178 - hypothetical protein, at 503,563 to 504,495
_04178
MPMX19_04179: MPMX19_04179 - D-inositol-3-phosphate glycosyltransferase, at 504,586 to 505,755
_04179
MPMX19_04180: MPMX19_04180 - D-inositol-3-phosphate glycosyltransferase, at 506,132 to 507,334
_04180
Position (kb) 504
505
506 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 503.975 kb on + strand, within MPMX19_04178 at 503.975 kb on + strand, within MPMX19_04178 at 504.149 kb on + strand, within MPMX19_04178 at 504.149 kb on + strand, within MPMX19_04178 at 504.149 kb on + strand, within MPMX19_04178 at 504.150 kb on - strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.185 kb on + strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.186 kb on - strand, within MPMX19_04178 at 504.275 kb on + strand, within MPMX19_04178 at 504.283 kb on + strand, within MPMX19_04178 at 504.344 kb on + strand, within MPMX19_04178 at 504.344 kb on + strand, within MPMX19_04178 at 504.344 kb on + strand, within MPMX19_04178 at 504.344 kb on + strand, within MPMX19_04178 at 504.345 kb on - strand, within MPMX19_04178 at 504.356 kb on + strand, within MPMX19_04178 at 504.357 kb on - strand, within MPMX19_04178 at 504.357 kb on - strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.401 kb on + strand, within MPMX19_04178 at 504.402 kb on - strand at 504.402 kb on - strand at 504.689 kb on + strand at 504.689 kb on + strand at 504.689 kb on + strand at 504.690 kb on - strand at 504.807 kb on + strand, within MPMX19_04179 at 504.808 kb on - strand, within MPMX19_04179 at 505.073 kb on + strand, within MPMX19_04179 at 505.073 kb on + strand, within MPMX19_04179 at 505.073 kb on + strand, within MPMX19_04179 at 505.073 kb on + strand, within MPMX19_04179 at 505.073 kb on + strand, within MPMX19_04179 at 505.074 kb on - strand, within MPMX19_04179 at 505.074 kb on - strand, within MPMX19_04179 at 505.074 kb on - strand, within MPMX19_04179 at 505.074 kb on - strand, within MPMX19_04179 at 505.074 kb on - strand, within MPMX19_04179 at 505.517 kb on + strand, within MPMX19_04179 at 505.517 kb on + strand, within MPMX19_04179 at 505.517 kb on + strand, within MPMX19_04179 at 505.518 kb on - strand, within MPMX19_04179 at 505.527 kb on + strand, within MPMX19_04179 at 505.528 kb on - strand, within MPMX19_04179 at 505.598 kb on + strand, within MPMX19_04179 at 505.598 kb on + strand, within MPMX19_04179 at 505.598 kb on + strand, within MPMX19_04179 at 505.598 kb on + strand, within MPMX19_04179 at 505.599 kb on - strand, within MPMX19_04179 at 505.599 kb on - strand, within MPMX19_04179 at 505.599 kb on - strand, within MPMX19_04179 at 505.599 kb on - strand, within MPMX19_04179 at 505.599 kb on - strand, within MPMX19_04179 at 505.599 kb on - strand, within MPMX19_04179 at 505.631 kb on + strand, within MPMX19_04179 at 505.631 kb on + strand, within MPMX19_04179 at 505.632 kb on - strand, within MPMX19_04179 at 505.632 kb on - strand, within MPMX19_04179 at 505.632 kb on - strand, within MPMX19_04179 at 505.632 kb on - strand, within MPMX19_04179 at 505.632 kb on - strand, within MPMX19_04179 at 505.632 kb on - strand, within MPMX19_04179 at 505.746 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.748 kb on + strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.749 kb on - strand at 505.810 kb on + strand at 505.811 kb on - strand at 505.811 kb on - strand at 505.811 kb on - strand at 505.811 kb on - strand at 505.852 kb on + strand at 505.852 kb on + strand at 505.852 kb on + strand at 505.852 kb on + strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.853 kb on - strand at 505.983 kb on + strand at 505.983 kb on + strand at 505.984 kb on - strand at 505.984 kb on - strand at 505.984 kb on - strand at 505.984 kb on - strand at 506.038 kb on - strand at 506.077 kb on + strand at 506.114 kb on + strand at 506.114 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.220 kb on + strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.221 kb on - strand at 506.244 kb on + strand at 506.244 kb on + strand at 506.244 kb on + strand at 506.245 kb on - strand at 506.245 kb on - strand at 506.304 kb on + strand, within MPMX19_04180 at 506.304 kb on + strand, within MPMX19_04180 at 506.735 kb on + strand, within MPMX19_04180 at 506.735 kb on + strand, within MPMX19_04180
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 503,975 + MPMX19_04178 0.44 -1.7 503,975 + MPMX19_04178 0.44 +0.1 504,149 + MPMX19_04178 0.63 -2.8 504,149 + MPMX19_04178 0.63 -1.2 504,149 + MPMX19_04178 0.63 -0.4 504,150 - MPMX19_04178 0.63 +0.1 504,185 + MPMX19_04178 0.67 +0.2 504,185 + MPMX19_04178 0.67 +0.6 504,185 + MPMX19_04178 0.67 -0.2 504,185 + MPMX19_04178 0.67 +0.2 504,185 + MPMX19_04178 0.67 -1.9 504,185 + MPMX19_04178 0.67 -0.8 504,185 + MPMX19_04178 0.67 -1.0 504,185 + MPMX19_04178 0.67 -1.5 504,185 + MPMX19_04178 0.67 +0.1 504,185 + MPMX19_04178 0.67 +0.6 504,185 + MPMX19_04178 0.67 -0.2 504,185 + MPMX19_04178 0.67 -0.7 504,185 + MPMX19_04178 0.67 -1.5 504,185 + MPMX19_04178 0.67 +0.3 504,185 + MPMX19_04178 0.67 -0.1 504,185 + MPMX19_04178 0.67 -1.5 504,185 + MPMX19_04178 0.67 -1.2 504,185 + MPMX19_04178 0.67 -2.2 504,185 + MPMX19_04178 0.67 +0.1 504,185 + MPMX19_04178 0.67 -1.1 504,185 + MPMX19_04178 0.67 +0.0 504,185 + MPMX19_04178 0.67 -0.2 504,185 + MPMX19_04178 0.67 +0.3 504,185 + MPMX19_04178 0.67 -0.4 504,185 + MPMX19_04178 0.67 -0.6 504,185 + MPMX19_04178 0.67 +1.4 504,185 + MPMX19_04178 0.67 -0.9 504,186 - MPMX19_04178 0.67 +0.9 504,186 - MPMX19_04178 0.67 +1.4 504,186 - MPMX19_04178 0.67 -0.6 504,186 - MPMX19_04178 0.67 -0.7 504,186 - MPMX19_04178 0.67 -1.2 504,186 - MPMX19_04178 0.67 -0.4 504,186 - MPMX19_04178 0.67 -1.7 504,186 - MPMX19_04178 0.67 -0.0 504,186 - MPMX19_04178 0.67 -1.4 504,186 - MPMX19_04178 0.67 -0.4 504,186 - MPMX19_04178 0.67 +0.3 504,186 - MPMX19_04178 0.67 -0.3 504,186 - MPMX19_04178 0.67 -0.2 504,186 - MPMX19_04178 0.67 -1.6 504,186 - MPMX19_04178 0.67 +0.6 504,186 - MPMX19_04178 0.67 -1.2 504,186 - MPMX19_04178 0.67 -0.8 504,186 - MPMX19_04178 0.67 +1.2 504,186 - MPMX19_04178 0.67 -0.7 504,186 - MPMX19_04178 0.67 -1.0 504,186 - MPMX19_04178 0.67 -0.5 504,186 - MPMX19_04178 0.67 -0.2 504,275 + MPMX19_04178 0.76 +0.3 504,283 + MPMX19_04178 0.77 -0.2 504,344 + MPMX19_04178 0.84 +0.4 504,344 + MPMX19_04178 0.84 -1.3 504,344 + MPMX19_04178 0.84 -0.4 504,344 + MPMX19_04178 0.84 -1.4 504,345 - MPMX19_04178 0.84 +0.2 504,356 + MPMX19_04178 0.85 -0.2 504,357 - MPMX19_04178 0.85 +1.6 504,357 - MPMX19_04178 0.85 -1.5 504,401 + MPMX19_04178 0.90 -0.4 504,401 + MPMX19_04178 0.90 -0.2 504,401 + MPMX19_04178 0.90 -0.1 504,401 + MPMX19_04178 0.90 -1.0 504,401 + MPMX19_04178 0.90 +1.2 504,401 + MPMX19_04178 0.90 -0.2 504,401 + MPMX19_04178 0.90 -0.4 504,401 + MPMX19_04178 0.90 -2.2 504,402 - -0.4 504,402 - -1.3 504,689 + -0.8 504,689 + +1.2 504,689 + -1.2 504,690 - +0.5 504,807 + MPMX19_04179 0.19 +0.1 504,808 - MPMX19_04179 0.19 -0.9 505,073 + MPMX19_04179 0.42 +0.1 505,073 + MPMX19_04179 0.42 +0.8 505,073 + MPMX19_04179 0.42 -0.4 505,073 + MPMX19_04179 0.42 -1.4 505,073 + MPMX19_04179 0.42 -1.2 505,074 - MPMX19_04179 0.42 -1.0 505,074 - MPMX19_04179 0.42 +0.1 505,074 - MPMX19_04179 0.42 -1.0 505,074 - MPMX19_04179 0.42 +0.2 505,074 - MPMX19_04179 0.42 +0.3 505,517 + MPMX19_04179 0.80 -3.0 505,517 + MPMX19_04179 0.80 -1.2 505,517 + MPMX19_04179 0.80 -1.8 505,518 - MPMX19_04179 0.80 -1.2 505,527 + MPMX19_04179 0.80 +0.3 505,528 - MPMX19_04179 0.81 -0.4 505,598 + MPMX19_04179 0.86 -0.2 505,598 + MPMX19_04179 0.86 +0.2 505,598 + MPMX19_04179 0.86 -0.6 505,598 + MPMX19_04179 0.86 -1.2 505,599 - MPMX19_04179 0.87 -1.4 505,599 - MPMX19_04179 0.87 -1.0 505,599 - MPMX19_04179 0.87 -0.8 505,599 - MPMX19_04179 0.87 +1.2 505,599 - MPMX19_04179 0.87 -1.0 505,599 - MPMX19_04179 0.87 +0.6 505,631 + MPMX19_04179 0.89 -0.4 505,631 + MPMX19_04179 0.89 +1.2 505,632 - MPMX19_04179 0.89 -0.4 505,632 - MPMX19_04179 0.89 -0.6 505,632 - MPMX19_04179 0.89 -0.6 505,632 - MPMX19_04179 0.89 -0.2 505,632 - MPMX19_04179 0.89 -1.7 505,632 - MPMX19_04179 0.89 -1.7 505,746 + +0.6 505,748 + +0.2 505,748 + +1.2 505,748 + -1.5 505,748 + -0.2 505,748 + -1.4 505,748 + +0.9 505,748 + -0.8 505,748 + -0.4 505,748 + -0.8 505,748 + -1.0 505,748 + +1.8 505,748 + -1.1 505,749 - -0.4 505,749 - -0.5 505,749 - -0.8 505,749 - -0.1 505,749 - -0.4 505,749 - -1.6 505,749 - +0.6 505,749 - -0.4 505,749 - +1.2 505,749 - -0.2 505,749 - +1.2 505,749 - -0.4 505,749 - +0.1 505,749 - +0.3 505,749 - -0.0 505,749 - -0.0 505,810 + +2.2 505,811 - -3.2 505,811 - -1.1 505,811 - -0.8 505,811 - -0.3 505,852 + -0.6 505,852 + +0.2 505,852 + -0.0 505,852 + -1.0 505,853 - -0.4 505,853 - -2.5 505,853 - +0.6 505,853 - +0.1 505,853 - +1.2 505,853 - -1.6 505,853 - +0.8 505,853 - -0.0 505,853 - -1.0 505,983 + +0.1 505,983 + +0.9 505,984 - -0.2 505,984 - -0.6 505,984 - +0.4 505,984 - -0.6 506,038 - +1.1 506,077 + -0.0 506,114 + -0.8 506,114 + +0.6 506,220 + -0.7 506,220 + +0.3 506,220 + -0.8 506,220 + +0.9 506,220 + -1.3 506,220 + -0.8 506,220 + -1.0 506,220 + +0.4 506,220 + -1.2 506,220 + -0.0 506,220 + -0.9 506,220 + -0.8 506,221 - +1.4 506,221 - +0.6 506,221 - -2.1 506,221 - +0.0 506,221 - +0.8 506,221 - -0.7 506,221 - -0.1 506,221 - +0.1 506,221 - -0.6 506,221 - -0.0 506,221 - -0.2 506,221 - -1.9 506,221 - +1.9 506,221 - -1.5 506,244 + -0.6 506,244 + +0.4 506,244 + -1.2 506,245 - +0.8 506,245 - -1.3 506,304 + MPMX19_04180 0.14 -0.4 506,304 + MPMX19_04180 0.14 -1.5 506,735 + MPMX19_04180 0.50 -1.5 506,735 + MPMX19_04180 0.50 +0.6
Or see this region's nucleotide sequence