Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03748

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,189,710	+				-1.3
1,189,710	+				-1.0
1,189,710	+				+0.2
1,189,711	-				-0.5
1,189,711	-				-0.6
1,189,993	+		MPMX19_03747	0.31	-0.1
1,189,994	-		MPMX19_03747	0.31	-1.3
1,189,994	-		MPMX19_03747	0.31	-3.6
1,190,065	+		MPMX19_03747	0.43	-0.5
1,190,065	+		MPMX19_03747	0.43	-1.1
1,190,065	+		MPMX19_03747	0.43	-1.1
1,190,065	+		MPMX19_03747	0.43	-1.4
1,190,066	-		MPMX19_03747	0.43	-0.5
1,190,066	-		MPMX19_03747	0.43	-0.3
1,190,066	-		MPMX19_03747	0.43	+0.0
1,190,416	+				-0.8
1,190,417	-				+0.2
1,190,417	-				-0.1
1,190,480	+				-0.7
1,190,480	+				-0.5
1,190,481	-				-1.8
1,190,481	-				-0.4
1,190,951	+		MPMX19_03748	0.14	-0.4
1,190,951	+		MPMX19_03748	0.14	-1.0
1,190,951	+		MPMX19_03748	0.14	-0.3
1,190,952	-		MPMX19_03748	0.14	+0.0
1,190,952	-		MPMX19_03748	0.14	-0.0
1,190,952	-		MPMX19_03748	0.14	+0.1
1,190,993	+		MPMX19_03748	0.16	-1.5
1,190,993	+		MPMX19_03748	0.16	-1.4
1,190,994	-		MPMX19_03748	0.16	+0.6
1,190,994	-		MPMX19_03748	0.16	+0.7
1,190,994	-		MPMX19_03748	0.16	+0.0
1,191,167	+		MPMX19_03748	0.22	-0.0
1,191,167	+		MPMX19_03748	0.22	-1.3
1,191,167	+		MPMX19_03748	0.22	-0.8
1,191,167	+		MPMX19_03748	0.22	-2.5
1,191,167	+		MPMX19_03748	0.22	-0.5
1,191,167	+		MPMX19_03748	0.22	+0.0
1,191,167	+		MPMX19_03748	0.22	+0.5
1,191,167	+		MPMX19_03748	0.22	+0.5
1,191,167	+		MPMX19_03748	0.22	-0.5
1,191,167	+		MPMX19_03748	0.22	-2.3
1,191,167	+		MPMX19_03748	0.22	-0.5
1,191,167	+		MPMX19_03748	0.22	-0.3
1,191,167	+		MPMX19_03748	0.22	-0.5
1,191,168	-		MPMX19_03748	0.22	-1.1
1,191,168	-		MPMX19_03748	0.22	-0.4
1,191,168	-		MPMX19_03748	0.22	-2.4
1,191,168	-		MPMX19_03748	0.22	+0.0
1,191,168	-		MPMX19_03748	0.22	+0.5
1,191,168	-		MPMX19_03748	0.22	-1.2
1,191,168	-		MPMX19_03748	0.22	-0.4
1,191,168	-		MPMX19_03748	0.22	-1.8
1,191,168	-		MPMX19_03748	0.22	-1.5
1,191,168	-		MPMX19_03748	0.22	-0.5
1,191,168	-		MPMX19_03748	0.22	+0.4
1,191,203	+		MPMX19_03748	0.24	-0.7
1,191,203	+		MPMX19_03748	0.24	-0.2
1,191,203	+		MPMX19_03748	0.24	-0.6
1,191,203	+		MPMX19_03748	0.24	+0.5
1,191,203	+		MPMX19_03748	0.24	-0.1
1,191,203	+		MPMX19_03748	0.24	-2.0
1,191,203	+		MPMX19_03748	0.24	-0.5
1,191,204	-		MPMX19_03748	0.24	+1.7
1,191,204	-		MPMX19_03748	0.24	-0.6
1,191,204	-		MPMX19_03748	0.24	-1.0
1,191,204	-		MPMX19_03748	0.24	-0.0
1,191,204	-		MPMX19_03748	0.24	-0.7
1,191,204	-		MPMX19_03748	0.24	-1.2
1,191,204	-		MPMX19_03748	0.24	+0.5
1,191,204	-		MPMX19_03748	0.24	-1.9
1,191,570	-		MPMX19_03748	0.37	+0.2
1,191,570	-		MPMX19_03748	0.37	+0.7
1,191,570	-		MPMX19_03748	0.37	-1.6
1,191,782	+		MPMX19_03748	0.44	-1.0
1,191,782	+		MPMX19_03748	0.44	-0.7
1,191,783	-		MPMX19_03748	0.45	-0.3
1,191,783	-		MPMX19_03748	0.45	+0.2
1,191,783	-		MPMX19_03748	0.45	-0.5
1,191,783	-		MPMX19_03748	0.45	-0.2
1,191,800	+		MPMX19_03748	0.45	+0.2
1,191,800	+		MPMX19_03748	0.45	-0.5
1,191,801	-		MPMX19_03748	0.45	+1.0
1,191,801	-		MPMX19_03748	0.45	-0.9
1,191,801	-		MPMX19_03748	0.45	-1.3
1,191,801	-		MPMX19_03748	0.45	+0.2
1,191,801	-		MPMX19_03748	0.45	-1.5
1,191,801	-		MPMX19_03748	0.45	-0.4
1,191,801	-		MPMX19_03748	0.45	+0.0
1,191,801	-		MPMX19_03748	0.45	-0.7
1,191,926	+		MPMX19_03748	0.50	-1.1
1,191,927	-		MPMX19_03748	0.50	+1.0
1,191,927	-		MPMX19_03748	0.50	+0.2
1,191,936	+		MPMX19_03748	0.50	+0.0
1,191,936	+		MPMX19_03748	0.50	-1.1
1,191,936	+		MPMX19_03748	0.50	-1.0
1,191,936	+		MPMX19_03748	0.50	-0.3
1,191,936	+		MPMX19_03748	0.50	-0.6
1,191,936	+		MPMX19_03748	0.50	-0.3
1,191,936	+		MPMX19_03748	0.50	+1.3
1,191,937	-		MPMX19_03748	0.50	-3.6
1,191,959	+		MPMX19_03748	0.51	-0.5
1,191,959	+		MPMX19_03748	0.51	-1.1
1,191,960	-		MPMX19_03748	0.51	-0.5
1,191,960	-		MPMX19_03748	0.51	-2.5
1,191,960	-		MPMX19_03748	0.51	-0.2
1,191,960	-		MPMX19_03748	0.51	-0.8
1,191,960	-		MPMX19_03748	0.51	-1.1
1,191,980	+		MPMX19_03748	0.52	-0.3
1,191,980	+		MPMX19_03748	0.52	+0.0
1,191,980	+		MPMX19_03748	0.52	-2.3
1,191,980	+		MPMX19_03748	0.52	-1.5
1,191,980	+		MPMX19_03748	0.52	+1.5
1,191,981	-		MPMX19_03748	0.52	-1.1
1,191,981	-		MPMX19_03748	0.52	+0.0
1,191,981	-		MPMX19_03748	0.52	-0.8
1,191,981	-		MPMX19_03748	0.52	+1.0
1,191,981	-		MPMX19_03748	0.52	-0.3
1,192,124	+		MPMX19_03748	0.57	-2.0
1,192,124	+		MPMX19_03748	0.57	+1.0
1,192,125	-		MPMX19_03748	0.57	+0.2
1,192,125	-		MPMX19_03748	0.57	-0.3
1,192,125	-		MPMX19_03748	0.57	-1.4
1,192,187	+		MPMX19_03748	0.59	-0.7
1,192,187	+		MPMX19_03748	0.59	+0.2
1,192,187	+		MPMX19_03748	0.59	-1.3
1,192,188	-		MPMX19_03748	0.59	+0.3
1,192,484	+		MPMX19_03748	0.70	-0.7
1,192,485	-		MPMX19_03748	0.70	-2.1
1,192,953	+		MPMX19_03748	0.87	+0.5
1,192,953	+		MPMX19_03748	0.87	-0.3
1,192,954	-		MPMX19_03748	0.87	-0.9
1,192,954	-		MPMX19_03748	0.87	-1.4
1,192,954	-		MPMX19_03748	0.87	-0.6
1,193,000	+		MPMX19_03748	0.89	-1.9
1,193,000	+		MPMX19_03748	0.89	-2.0
1,193,000	+		MPMX19_03748	0.89	-0.4
1,193,126	+				+0.5
1,193,126	+				+1.6
1,193,126	+				-2.3
1,193,126	+				-0.8
1,193,127	-				-1.2
1,193,127	-				-0.8
1,193,127	-				-0.2
1,193,127	-				-3.1
1,193,407	+		MPMX19_03749	0.13	-0.3
1,193,408	-		MPMX19_03749	0.13	-0.5
1,193,626	+		MPMX19_03749	0.45	+0.5
1,193,626	+		MPMX19_03749	0.45	-1.1
1,193,626	+		MPMX19_03749	0.45	+3.4
1,193,626	+		MPMX19_03749	0.45	+1.0
1,193,626	+		MPMX19_03749	0.45	-0.4
1,193,626	+		MPMX19_03749	0.45	+0.6
1,193,626	+		MPMX19_03749	0.45	+0.0
1,193,626	+		MPMX19_03749	0.45	-0.3
1,193,627	-		MPMX19_03749	0.45	-1.4
1,193,627	-		MPMX19_03749	0.45	+0.3
1,193,627	-		MPMX19_03749	0.45	+0.3
1,193,627	-		MPMX19_03749	0.45	-1.1
1,193,627	-		MPMX19_03749	0.45	-0.5
1,193,627	-		MPMX19_03749	0.45	+0.5
1,193,627	-		MPMX19_03749	0.45	-0.0
1,193,627	-		MPMX19_03749	0.45	+0.2
1,193,627	-		MPMX19_03749	0.45	-1.0
1,193,627	-		MPMX19_03749	0.45	-0.4
1,193,803	+		MPMX19_03749	0.70	+1.3
1,193,804	-		MPMX19_03749	0.70	+0.6
1,193,899	+		MPMX19_03749	0.84	-1.5
1,193,899	+		MPMX19_03749	0.84	+0.0
1,193,899	+		MPMX19_03749	0.84	-0.8
1,193,899	+		MPMX19_03749	0.84	-1.0
1,193,900	-		MPMX19_03749	0.84	-1.3
1,193,900	-		MPMX19_03749	0.84	+1.0
1,193,900	-		MPMX19_03749	0.84	-1.5
1,193,900	-		MPMX19_03749	0.84	-0.9
1,193,911	+		MPMX19_03749	0.85	+0.5
1,193,911	+		MPMX19_03749	0.85	-1.3
1,193,911	+		MPMX19_03749	0.85	-1.4
1,193,911	+		MPMX19_03749	0.85	-0.7
1,193,911	+		MPMX19_03749	0.85	-0.3
1,193,912	-		MPMX19_03749	0.86	+0.8
1,194,019	+				-1.3
1,194,019	+				-1.0
1,194,019	+				-1.9
1,194,019	+				-2.3
1,194,020	-				-2.0
1,194,020	-				-0.1
1,194,020	-				-1.1
1,194,020	-				-0.1
1,194,122	+				-0.2
1,194,122	+				+0.7
1,194,122	+				-0.6
1,194,122	+				-0.2
1,194,122	+				-0.3
1,194,122	+				-2.2
1,194,123	-				-1.0
1,194,123	-				-1.5
1,194,123	-				-0.3
1,194,123	-				-0.1
1,194,225	+				+0.2
1,194,225	+				+0.3
1,194,225	+				+1.0
1,194,225	+				-0.4
1,194,225	+				-0.5
1,194,269	+				+1.5
1,194,269	+				+0.6
1,194,269	+				-1.0
1,194,269	+				+0.1
1,194,269	+				-0.3
1,194,269	+				-0.5
1,194,270	-				+0.8
1,194,270	-				-1.8
1,194,270	-				-0.3
1,194,270	-				-2.8
1,194,270	-				-1.3