Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03746

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,187,113	+		MPMX19_03745	0.68	-0.5
1,187,113	+		MPMX19_03745	0.68	-0.7
1,187,113	+		MPMX19_03745	0.68	-0.4
1,187,113	+		MPMX19_03745	0.68	-0.2
1,187,114	-		MPMX19_03745	0.68	+0.0
1,187,182	+		MPMX19_03745	0.72	-0.8
1,187,182	+		MPMX19_03745	0.72	+1.2
1,187,344	+		MPMX19_03745	0.81	-0.1
1,187,344	+		MPMX19_03745	0.81	-0.8
1,187,344	+		MPMX19_03745	0.81	-1.0
1,187,345	-		MPMX19_03745	0.81	-0.2
1,187,345	-		MPMX19_03745	0.81	+1.8
1,187,345	-		MPMX19_03745	0.81	-0.2
1,187,345	-		MPMX19_03745	0.81	-0.6
1,187,345	-		MPMX19_03745	0.81	+0.2
1,187,350	+		MPMX19_03745	0.81	-1.5
1,187,350	+		MPMX19_03745	0.81	-0.5
1,187,350	+		MPMX19_03745	0.81	-0.5
1,187,350	+		MPMX19_03745	0.81	-1.0
1,187,350	+		MPMX19_03745	0.81	+0.8
1,187,351	-		MPMX19_03745	0.81	-1.1
1,187,351	-		MPMX19_03745	0.81	-1.7
1,187,351	-		MPMX19_03745	0.81	+0.6
1,187,351	-		MPMX19_03745	0.81	+1.5
1,187,351	-		MPMX19_03745	0.81	-0.9
1,187,351	-		MPMX19_03745	0.81	-0.4
1,187,351	-		MPMX19_03745	0.81	-0.2
1,187,351	-		MPMX19_03745	0.81	-0.5
1,187,413	+		MPMX19_03745	0.85	+1.6
1,187,413	+		MPMX19_03745	0.85	-0.5
1,187,413	+		MPMX19_03745	0.85	-1.2
1,187,413	+		MPMX19_03745	0.85	-0.5
1,187,413	+		MPMX19_03745	0.85	-1.3
1,187,413	+		MPMX19_03745	0.85	-0.5
1,187,413	+		MPMX19_03745	0.85	-0.3
1,187,413	+		MPMX19_03745	0.85	-0.3
1,187,413	+		MPMX19_03745	0.85	+0.1
1,187,413	+		MPMX19_03745	0.85	+0.5
1,187,413	+		MPMX19_03745	0.85	-0.8
1,187,413	+		MPMX19_03745	0.85	+1.0
1,187,414	-		MPMX19_03745	0.85	-1.3
1,187,414	-		MPMX19_03745	0.85	-1.4
1,187,414	-		MPMX19_03745	0.85	+0.7
1,187,414	-		MPMX19_03745	0.85	+0.2
1,187,414	-		MPMX19_03745	0.85	-1.6
1,187,414	-		MPMX19_03745	0.85	+1.0
1,187,414	-		MPMX19_03745	0.85	-1.0
1,187,414	-		MPMX19_03745	0.85	+0.0
1,187,414	-		MPMX19_03745	0.85	-0.4
1,187,414	-		MPMX19_03745	0.85	+1.6
1,188,423	+		MPMX19_03746	0.35	-0.1
1,188,423	+		MPMX19_03746	0.35	-1.9
1,188,423	+		MPMX19_03746	0.35	-1.3
1,188,423	+		MPMX19_03746	0.35	-1.7
1,188,424	-		MPMX19_03746	0.35	-1.7
1,188,768	+		MPMX19_03746	0.51	-1.1
1,188,768	+		MPMX19_03746	0.51	-0.5
1,188,768	+		MPMX19_03746	0.51	+0.8
1,188,769	-		MPMX19_03746	0.52	-0.3
1,188,807	+		MPMX19_03746	0.53	-0.1
1,188,807	+		MPMX19_03746	0.53	-1.2
1,188,807	+		MPMX19_03746	0.53	+0.6
1,188,808	-		MPMX19_03746	0.53	+0.2
1,188,808	-		MPMX19_03746	0.53	-2.2
1,188,808	-		MPMX19_03746	0.53	-2.1
1,188,808	-		MPMX19_03746	0.53	-1.0
1,188,808	-		MPMX19_03746	0.53	-0.7
1,188,808	-		MPMX19_03746	0.53	-1.2
1,189,500	+		MPMX19_03746	0.86	+0.7
1,189,500	+		MPMX19_03746	0.86	-1.1
1,189,500	+		MPMX19_03746	0.86	-1.3
1,189,501	-		MPMX19_03746	0.86	-0.4
1,189,536	+		MPMX19_03746	0.88	-0.8
1,189,536	+		MPMX19_03746	0.88	-1.7
1,189,536	+		MPMX19_03746	0.88	-0.0
1,189,537	-		MPMX19_03746	0.88	-2.0
1,189,537	-		MPMX19_03746	0.88	-1.1
1,189,710	+				-1.3
1,189,710	+				-1.0
1,189,710	+				+0.2
1,189,711	-				-0.5
1,189,711	-				-0.6
1,189,993	+		MPMX19_03747	0.31	-0.1
1,189,994	-		MPMX19_03747	0.31	-1.3
1,189,994	-		MPMX19_03747	0.31	-3.6
1,190,065	+		MPMX19_03747	0.43	-0.5
1,190,065	+		MPMX19_03747	0.43	-1.1
1,190,065	+		MPMX19_03747	0.43	-1.1
1,190,065	+		MPMX19_03747	0.43	-1.4
1,190,066	-		MPMX19_03747	0.43	-0.5
1,190,066	-		MPMX19_03747	0.43	-0.3
1,190,066	-		MPMX19_03747	0.43	+0.0
1,190,416	+				-0.8
1,190,417	-				+0.2
1,190,417	-				-0.1
1,190,480	+				-0.7
1,190,480	+				-0.5
1,190,481	-				-1.8
1,190,481	-				-0.4