Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03738

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,181,174	+		MPMX19_03737	0.36	-0.1
1,181,174	+		MPMX19_03737	0.36	+0.5
1,181,174	+		MPMX19_03737	0.36	-0.2
1,181,174	+		MPMX19_03737	0.36	-1.0
1,181,175	-		MPMX19_03737	0.37	-2.0
1,181,175	-		MPMX19_03737	0.37	-1.8
1,181,295	-		MPMX19_03737	0.50	+0.5
1,181,381	+		MPMX19_03737	0.60	-1.5
1,181,381	+		MPMX19_03737	0.60	-0.1
1,181,381	+		MPMX19_03737	0.60	-0.1
1,181,381	+		MPMX19_03737	0.60	-1.0
1,181,382	-		MPMX19_03737	0.61	-0.5
1,181,382	-		MPMX19_03737	0.61	-1.0
1,181,382	-		MPMX19_03737	0.61	-0.6
1,181,396	+		MPMX19_03737	0.62	-0.4
1,181,396	+		MPMX19_03737	0.62	-0.4
1,181,396	+		MPMX19_03737	0.62	+0.8
1,181,396	+		MPMX19_03737	0.62	-0.3
1,181,397	-		MPMX19_03737	0.62	-1.1
1,181,397	-		MPMX19_03737	0.62	-0.7
1,181,397	-		MPMX19_03737	0.62	-0.0
1,181,397	-		MPMX19_03737	0.62	-2.2
1,181,397	-		MPMX19_03737	0.62	+0.6
1,181,397	-		MPMX19_03737	0.62	-1.0
1,181,504	+		MPMX19_03737	0.75	-0.0
1,181,504	+		MPMX19_03737	0.75	+0.0
1,181,504	+		MPMX19_03737	0.75	-0.5
1,181,504	+		MPMX19_03737	0.75	+0.6
1,181,505	-		MPMX19_03737	0.75	-1.7
1,181,505	-		MPMX19_03737	0.75	+0.8
1,181,505	-		MPMX19_03737	0.75	+0.7
1,181,505	-		MPMX19_03737	0.75	+1.5
1,181,505	-		MPMX19_03737	0.75	-0.5
1,181,505	-		MPMX19_03737	0.75	+0.2
1,181,505	-		MPMX19_03737	0.75	+0.8
1,181,505	-		MPMX19_03737	0.75	+2.4
1,181,618	+		MPMX19_03737	0.88	-0.6
1,181,618	+		MPMX19_03737	0.88	-0.6
1,181,618	+		MPMX19_03737	0.88	-0.3
1,181,618	+		MPMX19_03737	0.88	-2.0
1,181,618	+		MPMX19_03737	0.88	-1.0
1,181,619	-		MPMX19_03737	0.88	+0.2
1,181,734	+				+1.0
1,181,734	+				+0.8
1,181,734	+				-0.7
1,181,734	+				+1.0
1,181,734	+				-0.8
1,181,735	-				-0.1
1,181,735	-				-1.1
1,181,735	-				+0.3
1,181,778	+				+1.0
1,181,778	+				-0.1
1,181,778	+				+0.7
1,181,778	+				-0.1
1,181,778	+				-1.0
1,181,779	-				+1.0
1,181,779	-				-0.2
1,181,779	-				+0.5
1,181,779	-				-0.3
1,181,960	+		MPMX19_03738	0.38	-1.3
1,181,960	+		MPMX19_03738	0.38	-1.9
1,181,960	+		MPMX19_03738	0.38	-1.8
1,181,960	+		MPMX19_03738	0.38	-0.9
1,181,960	+		MPMX19_03738	0.38	-1.3
1,181,960	+		MPMX19_03738	0.38	-1.4
1,181,960	+		MPMX19_03738	0.38	+0.3
1,181,960	+		MPMX19_03738	0.38	+0.4
1,181,960	+		MPMX19_03738	0.38	-1.8
1,181,960	-		MPMX19_03738	0.38	+0.2
1,181,961	-		MPMX19_03738	0.38	-1.3
1,181,961	-		MPMX19_03738	0.38	-1.7
1,181,961	-		MPMX19_03738	0.38	-1.4
1,181,961	-		MPMX19_03738	0.38	-1.8
1,181,961	-		MPMX19_03738	0.38	+0.7
1,181,961	-		MPMX19_03738	0.38	-0.3
1,181,961	-		MPMX19_03738	0.38	-1.0
1,182,380	+		MPMX19_03739	0.85	-1.3
1,182,380	+		MPMX19_03739	0.85	-0.5
1,182,380	+		MPMX19_03739	0.85	-0.2
1,182,380	+		MPMX19_03739	0.85	-0.5
1,182,380	+		MPMX19_03739	0.85	-0.6
1,182,381	-		MPMX19_03739	0.86	+1.0
1,182,381	-		MPMX19_03739	0.86	-0.3
1,182,381	-		MPMX19_03739	0.86	-0.5
1,182,381	-		MPMX19_03739	0.86	-0.5
1,182,381	-		MPMX19_03739	0.86	+0.2
1,182,381	-		MPMX19_03739	0.86	-1.0
1,182,381	-		MPMX19_03739	0.86	-0.1
1,182,381	-		MPMX19_03739	0.86	+0.6
1,182,557	+				+0.0
1,182,558	-				-1.1
1,182,891	+		MPMX19_03740	0.30	-0.5
1,182,891	+		MPMX19_03740	0.30	-0.7
1,182,891	+		MPMX19_03740	0.30	-1.2
1,182,891	+		MPMX19_03740	0.30	+1.0
1,182,891	+		MPMX19_03740	0.30	+1.5
1,182,891	+		MPMX19_03740	0.30	+0.5
1,182,942	+		MPMX19_03740	0.33	-1.4
1,182,942	+		MPMX19_03740	0.33	+1.3
1,182,943	-		MPMX19_03740	0.34	-0.3
1,182,943	-		MPMX19_03740	0.34	-0.1
1,182,943	-		MPMX19_03740	0.34	-0.4
1,182,943	-		MPMX19_03740	0.34	+0.3
1,182,943	-		MPMX19_03740	0.34	-0.8
1,183,032	+		MPMX19_03740	0.39	-0.2
1,183,032	+		MPMX19_03740	0.39	-0.5
1,183,032	+		MPMX19_03740	0.39	-1.0
1,183,032	+		MPMX19_03740	0.39	-0.3
1,183,032	+		MPMX19_03740	0.39	-2.0
1,183,033	-		MPMX19_03740	0.39	-0.2