Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03704

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,142,841	+				+0.0
1,142,841	+				-0.8
1,142,841	+				-0.3
1,142,841	+				-0.4
1,142,842	-				+2.0
1,142,842	-				-1.5
1,142,907	+				-0.1
1,142,908	-				-2.3
1,143,217	+		MPMX19_03703	0.33	-0.1
1,143,218	-		MPMX19_03703	0.33	-2.3
1,143,218	-		MPMX19_03703	0.33	-0.1
1,143,268	+		MPMX19_03703	0.40	+0.0
1,143,268	+		MPMX19_03703	0.40	+1.5
1,143,269	-		MPMX19_03703	0.40	-1.1
1,143,269	-		MPMX19_03703	0.40	-0.8
1,143,311	+		MPMX19_03703	0.46	-1.8
1,143,311	+		MPMX19_03703	0.46	-1.2
1,143,312	-		MPMX19_03703	0.46	-0.2
1,143,312	-		MPMX19_03703	0.46	-1.0
1,143,312	-		MPMX19_03703	0.46	+0.5
1,143,312	-		MPMX19_03703	0.46	-1.3
1,143,439	+		MPMX19_03703	0.64	+0.5
1,143,439	+		MPMX19_03703	0.64	-0.3
1,143,439	+		MPMX19_03703	0.64	-1.1
1,143,440	-		MPMX19_03703	0.64	-2.0
1,143,440	-		MPMX19_03703	0.64	+0.5
1,143,440	-		MPMX19_03703	0.64	+0.3
1,143,440	-		MPMX19_03703	0.64	-0.2
1,143,440	-		MPMX19_03703	0.64	-1.1
1,143,505	+		MPMX19_03703	0.73	-0.6
1,143,505	+		MPMX19_03703	0.73	-0.7
1,143,506	-		MPMX19_03703	0.73	-1.4
1,143,568	+		MPMX19_03703	0.82	+0.0
1,143,568	+		MPMX19_03703	0.82	-0.6
1,143,568	+		MPMX19_03703	0.82	-0.3
1,143,568	+		MPMX19_03703	0.82	-0.4
1,143,568	+		MPMX19_03703	0.82	+0.3
1,143,569	-		MPMX19_03703	0.82	+1.0
1,143,569	-		MPMX19_03703	0.82	-0.7
1,143,569	-		MPMX19_03703	0.82	-1.3
1,143,569	-		MPMX19_03703	0.82	-0.8
1,143,569	-		MPMX19_03703	0.82	-0.5
1,143,569	-		MPMX19_03703	0.82	-1.4
1,143,569	-		MPMX19_03703	0.82	-0.5
1,143,606	+		MPMX19_03703	0.87	-0.1
1,143,606	+		MPMX19_03703	0.87	-0.1
1,143,606	+		MPMX19_03703	0.87	-0.5
1,143,606	+		MPMX19_03703	0.87	+2.0
1,143,606	+		MPMX19_03703	0.87	+0.6
1,143,607	-		MPMX19_03703	0.87	-0.4
1,143,607	-		MPMX19_03703	0.87	-1.5
1,143,607	-		MPMX19_03703	0.87	+0.7
1,143,607	-		MPMX19_03703	0.87	-0.1
1,143,607	-		MPMX19_03703	0.87	+0.2
1,143,607	-		MPMX19_03703	0.87	-0.3
1,143,607	-		MPMX19_03703	0.87	+1.2
1,143,607	-		MPMX19_03703	0.87	-0.9
1,144,150	-		MPMX19_03704	0.45	-0.5
1,144,150	-		MPMX19_03704	0.45	-1.3
1,144,150	-		MPMX19_03704	0.45	+0.8
1,144,150	-		MPMX19_03704	0.45	-0.0
1,144,154	+		MPMX19_03704	0.46	-0.5
1,144,154	+		MPMX19_03704	0.46	+1.0
1,144,154	+		MPMX19_03704	0.46	+1.0
1,144,154	+		MPMX19_03704	0.46	+1.3
1,144,154	+		MPMX19_03704	0.46	+0.3
1,144,154	+		MPMX19_03704	0.46	-1.4
1,144,154	+		MPMX19_03704	0.46	+0.0
1,144,154	+		MPMX19_03704	0.46	+1.0
1,144,154	+		MPMX19_03704	0.46	-0.9
1,144,154	+		MPMX19_03704	0.46	-1.7
1,144,154	+		MPMX19_03704	0.46	+1.6
1,144,154	+		MPMX19_03704	0.46	-1.5
1,144,154	+		MPMX19_03704	0.46	+0.7
1,144,154	+		MPMX19_03704	0.46	-0.1
1,144,154	+		MPMX19_03704	0.46	+0.5
1,144,154	+		MPMX19_03704	0.46	-0.4
1,144,154	+		MPMX19_03704	0.46	+0.0
1,144,154	+		MPMX19_03704	0.46	-1.3
1,144,154	+		MPMX19_03704	0.46	-1.2
1,144,154	+		MPMX19_03704	0.46	+0.3
1,144,154	+		MPMX19_03704	0.46	-0.3
1,144,154	+		MPMX19_03704	0.46	-0.4
1,144,154	+		MPMX19_03704	0.46	-1.2
1,144,154	+		MPMX19_03704	0.46	-0.6
1,144,154	+		MPMX19_03704	0.46	-0.5
1,144,154	+		MPMX19_03704	0.46	+0.3
1,144,154	+		MPMX19_03704	0.46	-1.5
1,144,154	+		MPMX19_03704	0.46	-0.5
1,144,154	+		MPMX19_03704	0.46	+0.0
1,144,154	+		MPMX19_03704	0.46	-0.9
1,144,154	+		MPMX19_03704	0.46	-1.3
1,144,154	+		MPMX19_03704	0.46	-1.2
1,144,154	+		MPMX19_03704	0.46	+0.0
1,144,155	-		MPMX19_03704	0.46	-0.7
1,144,155	-		MPMX19_03704	0.46	-1.9
1,144,155	-		MPMX19_03704	0.46	-0.3
1,144,155	-		MPMX19_03704	0.46	-0.8
1,144,155	-		MPMX19_03704	0.46	-0.1
1,144,155	-		MPMX19_03704	0.46	+0.3
1,144,155	-		MPMX19_03704	0.46	+0.3
1,144,155	-		MPMX19_03704	0.46	+1.0
1,144,155	-		MPMX19_03704	0.46	-0.5
1,144,155	-		MPMX19_03704	0.46	+1.0
1,144,155	-		MPMX19_03704	0.46	-0.1
1,144,155	-		MPMX19_03704	0.46	-0.1
1,144,155	-		MPMX19_03704	0.46	-0.9
1,144,155	-		MPMX19_03704	0.46	-1.8
1,144,155	-		MPMX19_03704	0.46	-0.4
1,144,155	-		MPMX19_03704	0.46	-1.1
1,144,155	-		MPMX19_03704	0.46	+1.2
1,144,155	-		MPMX19_03704	0.46	-0.2
1,144,155	-		MPMX19_03704	0.46	-1.4
1,144,155	-		MPMX19_03704	0.46	-0.8
1,144,155	-		MPMX19_03704	0.46	-2.5
1,144,155	-		MPMX19_03704	0.46	-1.3
1,144,155	-		MPMX19_03704	0.46	-0.4
1,144,155	-		MPMX19_03704	0.46	-2.0
1,144,157	+		MPMX19_03704	0.46	+0.4
1,144,157	+		MPMX19_03704	0.46	-0.6
1,144,157	+		MPMX19_03704	0.46	+0.2
1,144,157	+		MPMX19_03704	0.46	+0.8
1,144,157	+		MPMX19_03704	0.46	+1.2
1,144,157	+		MPMX19_03704	0.46	+1.3
1,144,158	-		MPMX19_03704	0.46	-0.8
1,144,158	-		MPMX19_03704	0.46	-0.4
1,144,158	-		MPMX19_03704	0.46	-0.9
1,144,158	-		MPMX19_03704	0.46	-0.1
1,144,158	-		MPMX19_03704	0.46	+0.5
1,144,158	-		MPMX19_03704	0.46	+0.0
1,144,158	-		MPMX19_03704	0.46	+1.6
1,144,158	-		MPMX19_03704	0.46	-0.6
1,144,520	+		MPMX19_03704	0.88	-0.3
1,144,520	+		MPMX19_03704	0.88	-1.0
1,144,521	-		MPMX19_03704	0.88	-1.2
1,144,556	+				-1.0
1,144,713	+				-0.5
1,144,713	+				-0.2
1,144,713	+				-1.7
1,144,713	+				-1.0
1,144,713	+				+0.5
1,144,714	-				+0.3
1,144,714	-				-0.1
1,144,714	-				+0.3
1,144,714	-				-0.5
1,144,714	-				+0.2
1,144,714	-				-0.8
1,144,938	+		MPMX19_03705	0.35	-0.7
1,144,938	+		MPMX19_03705	0.35	-0.5
1,144,938	+		MPMX19_03705	0.35	-0.8
1,144,938	+		MPMX19_03705	0.35	+0.2
1,144,939	-		MPMX19_03705	0.35	+1.0
1,144,939	-		MPMX19_03705	0.35	-0.3
1,144,939	-		MPMX19_03705	0.35	+1.0
1,145,022	+		MPMX19_03705	0.47	+0.5
1,145,022	+		MPMX19_03705	0.47	-1.1
1,145,022	+		MPMX19_03705	0.47	-2.0
1,145,022	+		MPMX19_03705	0.47	+0.5
1,145,022	+		MPMX19_03705	0.47	-0.6
1,145,022	+		MPMX19_03705	0.47	-0.9
1,145,022	+		MPMX19_03705	0.47	-0.8
1,145,023	-		MPMX19_03705	0.47	-0.6
1,145,023	-		MPMX19_03705	0.47	-0.4
1,145,023	-		MPMX19_03705	0.47	+0.5
1,145,023	-		MPMX19_03705	0.47	-0.2
1,145,023	-		MPMX19_03705	0.47	+1.0
1,145,023	-		MPMX19_03705	0.47	-1.0
1,145,023	-		MPMX19_03705	0.47	+0.3
1,145,023	-		MPMX19_03705	0.47	-0.1
1,145,023	-		MPMX19_03705	0.47	-1.4
1,145,023	-		MPMX19_03705	0.47	-0.7
1,145,023	-		MPMX19_03705	0.47	-2.0
1,145,217	+		MPMX19_03705	0.77	-1.9
1,145,232	+		MPMX19_03705	0.79	-0.5
1,145,232	+		MPMX19_03705	0.79	+0.4
1,145,232	+		MPMX19_03705	0.79	+0.3
1,145,233	-		MPMX19_03705	0.79	-0.5
1,145,233	-		MPMX19_03705	0.79	-0.1
1,145,280	+		MPMX19_03705	0.86	+1.0
1,145,280	+		MPMX19_03705	0.86	+0.1
1,145,280	+		MPMX19_03705	0.86	+0.5
1,145,280	+		MPMX19_03705	0.86	-0.6
1,145,281	-		MPMX19_03705	0.86	-0.0
1,145,281	-		MPMX19_03705	0.86	-0.6
1,145,281	-		MPMX19_03705	0.86	-0.8
1,145,281	-		MPMX19_03705	0.86	+0.7
1,145,281	-		MPMX19_03705	0.86	+0.5
1,145,281	-		MPMX19_03705	0.86	-1.3
1,145,281	-		MPMX19_03705	0.86	+0.9
1,145,281	-		MPMX19_03705	0.86	-0.9
1,145,301	+		MPMX19_03705	0.89	-1.0
1,145,301	+		MPMX19_03705	0.89	-1.1
1,145,301	+		MPMX19_03705	0.89	-2.0
1,145,301	+		MPMX19_03705	0.89	-0.4
1,145,301	+		MPMX19_03705	0.89	-0.1
1,145,301	+		MPMX19_03705	0.89	-1.3
1,145,302	-		MPMX19_03705	0.89	-2.3
1,145,302	-		MPMX19_03705	0.89	+0.5
1,145,391	+				+0.0
1,145,391	+				-0.1
1,145,391	+				-0.8
1,145,391	+				-1.7
1,145,392	-				+0.2
1,145,392	-				-1.3
1,145,392	-				+0.0
1,145,392	-				+2.0
1,145,392	-				-0.5
1,145,392	-				-0.8
1,145,392	-				+1.2
1,145,392	-				-0.6
1,145,392	-				-1.1
1,145,562	+		MPMX19_03706	0.27	-1.3
1,145,562	+		MPMX19_03706	0.27	-1.9
1,145,562	+		MPMX19_03706	0.27	-1.4
1,145,562	+		MPMX19_03706	0.27	-0.5
1,145,563	-		MPMX19_03706	0.27	-1.1
1,145,563	-		MPMX19_03706	0.27	-0.1
1,145,563	-		MPMX19_03706	0.27	-0.4
1,145,613	+		MPMX19_03706	0.34	+0.8
1,145,613	+		MPMX19_03706	0.34	-3.2
1,145,613	+		MPMX19_03706	0.34	-1.9
1,145,613	+		MPMX19_03706	0.34	+1.0
1,145,613	+		MPMX19_03706	0.34	-1.2
1,145,613	+		MPMX19_03706	0.34	-0.5
1,145,613	+		MPMX19_03706	0.34	-1.0
1,145,613	+		MPMX19_03706	0.34	+0.5
1,145,613	+		MPMX19_03706	0.34	-0.9
1,145,614	-		MPMX19_03706	0.34	-0.9
1,145,614	-		MPMX19_03706	0.34	+1.3
1,145,614	-		MPMX19_03706	0.34	+0.2
1,145,614	-		MPMX19_03706	0.34	-1.2
1,145,614	-		MPMX19_03706	0.34	-0.3
1,145,614	-		MPMX19_03706	0.34	+0.0
1,145,614	-		MPMX19_03706	0.34	+0.0
1,145,614	-		MPMX19_03706	0.34	-0.3
1,145,614	-		MPMX19_03706	0.34	-1.0
1,145,614	-		MPMX19_03706	0.34	-2.0
1,145,614	-		MPMX19_03706	0.34	-0.3
1,145,614	-		MPMX19_03706	0.34	-1.8
1,145,614	-		MPMX19_03706	0.34	+1.2
1,145,614	-		MPMX19_03706	0.34	+0.5
1,145,614	-		MPMX19_03706	0.34	-0.8
1,145,614	-		MPMX19_03706	0.34	-1.2
1,145,616	+		MPMX19_03706	0.35	-1.1
1,145,616	+		MPMX19_03706	0.35	-0.4
1,145,616	+		MPMX19_03706	0.35	-0.7
1,145,616	+		MPMX19_03706	0.35	-1.0
1,145,616	+		MPMX19_03706	0.35	-0.8
1,145,616	+		MPMX19_03706	0.35	-0.3
1,145,616	+		MPMX19_03706	0.35	-0.6
1,145,616	+		MPMX19_03706	0.35	-0.4
1,145,616	+		MPMX19_03706	0.35	-2.2
1,145,616	+		MPMX19_03706	0.35	-1.3
1,145,616	+		MPMX19_03706	0.35	+0.2
1,145,617	-		MPMX19_03706	0.35	-0.8
1,145,617	-		MPMX19_03706	0.35	-0.3
1,145,617	-		MPMX19_03706	0.35	+0.3
1,145,617	-		MPMX19_03706	0.35	+0.7
1,145,617	-		MPMX19_03706	0.35	-0.4