Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03677

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,113,851	+		MPMX19_03675	0.69	+0.2
1,113,851	+		MPMX19_03675	0.69	-0.5
1,113,851	+		MPMX19_03675	0.69	-0.5
1,113,851	+		MPMX19_03675	0.69	-1.0
1,113,851	+		MPMX19_03675	0.69	-0.7
1,114,116	+				-1.3
1,114,116	+				-1.9
1,114,116	+				-0.1
1,114,116	+				-1.4
1,114,116	+				+0.0
1,114,116	+				-0.0
1,114,117	-				-1.1
1,114,117	-				-0.3
1,114,117	-				-1.0
1,114,122	+				-1.0
1,114,122	+				-0.1
1,114,122	+				-0.5
1,114,122	+				+0.0
1,114,122	+				-1.5
1,114,122	+				-0.2
1,114,122	+				+1.3
1,114,122	+				-0.8
1,114,122	+				-0.3
1,114,122	+				+0.0
1,114,122	+				-2.0
1,114,122	+				-0.1
1,114,122	+				-1.1
1,114,122	+				-0.7
1,114,123	-				+0.5
1,114,123	-				-0.8
1,114,123	-				-1.3
1,114,123	-				+0.6
1,114,123	-				-3.2
1,114,123	-				+0.5
1,114,123	-				+0.1
1,114,123	-				+0.0
1,114,123	-				-1.4
1,114,123	-				-1.0
1,114,254	+				-0.3
1,114,254	+				-1.0
1,114,254	+				+0.6
1,114,255	-				-0.5
1,114,392	+		MPMX19_03676	0.13	+0.8
1,114,402	+		MPMX19_03676	0.16	+0.2
1,114,402	+		MPMX19_03676	0.16	-0.8
1,114,403	-		MPMX19_03676	0.16	-0.0
1,114,533	+		MPMX19_03676	0.46	-0.5
1,114,533	+		MPMX19_03676	0.46	-2.1
1,114,533	+		MPMX19_03676	0.46	+0.9
1,114,533	+		MPMX19_03676	0.46	-0.1
1,114,534	-		MPMX19_03676	0.46	-1.3
1,114,534	-		MPMX19_03676	0.46	-1.9
1,114,534	-		MPMX19_03676	0.46	-0.3
1,114,955	+		MPMX19_03677	0.16	-0.4
1,114,955	+		MPMX19_03677	0.16	-0.7
1,114,955	+		MPMX19_03677	0.16	-0.3
1,114,955	+		MPMX19_03677	0.16	-1.1
1,114,955	+		MPMX19_03677	0.16	+0.0
1,114,955	+		MPMX19_03677	0.16	-2.0
1,114,955	+		MPMX19_03677	0.16	-0.9
1,114,955	+		MPMX19_03677	0.16	-1.3
1,114,955	+		MPMX19_03677	0.16	-1.4
1,114,955	+		MPMX19_03677	0.16	-1.0
1,114,956	-		MPMX19_03677	0.16	-0.2
1,114,956	-		MPMX19_03677	0.16	-0.7
1,114,956	-		MPMX19_03677	0.16	-0.8
1,114,956	-		MPMX19_03677	0.16	-0.3
1,114,956	-		MPMX19_03677	0.16	-0.9
1,114,956	-		MPMX19_03677	0.16	-2.0
1,114,956	-		MPMX19_03677	0.16	-1.0
1,114,956	-		MPMX19_03677	0.16	-2.0
1,114,956	-		MPMX19_03677	0.16	-1.0
1,114,956	-		MPMX19_03677	0.16	+0.2
1,114,956	-		MPMX19_03677	0.16	-1.5
1,114,956	-		MPMX19_03677	0.16	-1.6
1,114,956	-		MPMX19_03677	0.16	+0.0
1,115,462	+		MPMX19_03677	0.61	-0.0
1,115,462	+		MPMX19_03677	0.61	+1.7
1,115,462	+		MPMX19_03677	0.61	-0.6
1,115,463	-		MPMX19_03677	0.61	-2.0
1,115,463	-		MPMX19_03677	0.61	-0.7
1,115,463	-		MPMX19_03677	0.61	-0.8
1,115,481	+		MPMX19_03677	0.63	-1.2
1,115,481	+		MPMX19_03677	0.63	+0.0
1,115,482	-		MPMX19_03677	0.63	-0.8
1,115,576	+		MPMX19_03677	0.71	-0.1
1,115,623	+		MPMX19_03677	0.75	+0.9
1,115,675	+		MPMX19_03677	0.80	-1.1
1,115,675	+		MPMX19_03677	0.80	+0.0
1,115,675	+		MPMX19_03677	0.80	-0.3
1,115,675	+		MPMX19_03677	0.80	+0.2
1,115,675	+		MPMX19_03677	0.80	+0.3
1,115,675	+		MPMX19_03677	0.80	-2.0
1,115,675	+		MPMX19_03677	0.80	-0.3
1,115,675	+		MPMX19_03677	0.80	-1.7
1,115,675	+		MPMX19_03677	0.80	-0.5
1,115,675	+		MPMX19_03677	0.80	-1.3
1,115,675	+		MPMX19_03677	0.80	-0.5
1,115,675	+		MPMX19_03677	0.80	+1.2
1,115,675	+		MPMX19_03677	0.80	-0.1
1,115,675	+		MPMX19_03677	0.80	+0.7
1,115,675	+		MPMX19_03677	0.80	-1.5
1,115,675	+		MPMX19_03677	0.80	-0.2
1,115,675	+		MPMX19_03677	0.80	-1.0
1,115,675	+		MPMX19_03677	0.80	-0.1
1,115,675	+		MPMX19_03677	0.80	-0.7
1,115,675	+		MPMX19_03677	0.80	-1.7
1,115,675	+		MPMX19_03677	0.80	+0.9
1,115,675	+		MPMX19_03677	0.80	-0.5
1,115,675	+		MPMX19_03677	0.80	-2.9
1,115,676	-		MPMX19_03677	0.80	-1.1
1,115,676	-		MPMX19_03677	0.80	+0.8
1,115,676	-		MPMX19_03677	0.80	+0.2
1,115,676	-		MPMX19_03677	0.80	-0.1
1,115,676	-		MPMX19_03677	0.80	-0.3
1,115,676	-		MPMX19_03677	0.80	-0.4
1,115,676	-		MPMX19_03677	0.80	-0.3
1,115,676	-		MPMX19_03677	0.80	-0.8
1,115,676	-		MPMX19_03677	0.80	-0.2
1,115,676	-		MPMX19_03677	0.80	-1.1
1,115,676	-		MPMX19_03677	0.80	+0.0
1,115,676	-		MPMX19_03677	0.80	+1.0
1,115,676	-		MPMX19_03677	0.80	-0.3
1,115,676	-		MPMX19_03677	0.80	-0.3
1,115,676	-		MPMX19_03677	0.80	+0.6
1,115,676	-		MPMX19_03677	0.80	+0.5
1,115,676	-		MPMX19_03677	0.80	+0.5
1,115,676	-		MPMX19_03677	0.80	-1.4
1,115,676	-		MPMX19_03677	0.80	-1.4
1,115,676	-		MPMX19_03677	0.80	-0.9
1,115,676	-		MPMX19_03677	0.80	-1.0
1,115,676	-		MPMX19_03677	0.80	-0.9
1,115,676	-		MPMX19_03677	0.80	-1.5
1,115,676	-		MPMX19_03677	0.80	-0.8
1,115,676	-		MPMX19_03677	0.80	-1.8
1,115,843	+				-0.7
1,115,843	+				+1.5
1,115,843	+				-1.8
1,115,844	-				-1.1
1,115,844	-				+0.9
1,115,844	-				+1.0
1,115,844	-				-1.5
1,115,844	-				+0.5
1,115,928	+				-2.5
1,115,928	+				-0.1
1,115,928	+				+0.6
1,115,928	+				-2.7
1,115,929	-				+0.0
1,115,929	-				-0.4
1,115,978	+				-0.8
1,115,978	+				-0.8
1,115,978	+				-0.1
1,115,978	+				-0.7
1,115,978	+				-0.8
1,115,978	+				+0.2
1,115,979	-				+0.4
1,115,979	-				-0.8
1,115,979	-				-1.5
1,115,979	-				-1.1
1,115,979	-				-1.0