Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03650

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,087,305	+				-0.2
1,087,305	+				-1.2
1,087,305	+				-0.7
1,087,306	-				-0.8
1,087,306	-				-0.3
1,087,306	-				+0.0
1,087,306	-				-2.2
1,087,306	-				-1.3
1,087,309	+				-1.5
1,087,309	+				-0.5
1,087,309	+				-1.4
1,087,309	+				+1.5
1,087,310	-				-1.0
1,087,460	+		MPMX19_03649	0.11	-1.4
1,087,460	+		MPMX19_03649	0.11	-1.7
1,087,460	+		MPMX19_03649	0.11	+0.4
1,087,460	+		MPMX19_03649	0.11	-1.1
1,087,460	+		MPMX19_03649	0.11	-0.8
1,087,460	+		MPMX19_03649	0.11	-0.8
1,087,460	+		MPMX19_03649	0.11	+0.4
1,087,460	+		MPMX19_03649	0.11	-0.7
1,087,461	-		MPMX19_03649	0.11	-1.4
1,087,461	-		MPMX19_03649	0.11	-1.9
1,087,461	-		MPMX19_03649	0.11	-2.0
1,087,461	-		MPMX19_03649	0.11	-1.8
1,087,461	-		MPMX19_03649	0.11	+0.2
1,087,478	+		MPMX19_03649	0.13	+0.5
1,087,478	+		MPMX19_03649	0.13	-1.2
1,087,478	+		MPMX19_03649	0.13	+0.7
1,087,478	+		MPMX19_03649	0.13	-1.2
1,087,479	-		MPMX19_03649	0.14	-0.5
1,087,526	+		MPMX19_03649	0.19	+1.2
1,087,526	+		MPMX19_03649	0.19	+1.4
1,087,526	+		MPMX19_03649	0.19	-1.8
1,087,527	-		MPMX19_03649	0.19	-1.1
1,087,527	-		MPMX19_03649	0.19	-0.4
1,087,527	-		MPMX19_03649	0.19	+0.0
1,087,527	-		MPMX19_03649	0.19	-0.5
1,087,527	-		MPMX19_03649	0.19	-2.1
1,087,530	+		MPMX19_03649	0.19	-0.9
1,087,532	+		MPMX19_03649	0.20	-1.5
1,087,532	+		MPMX19_03649	0.20	-2.3
1,087,532	+		MPMX19_03649	0.20	-1.1
1,087,533	-		MPMX19_03649	0.20	-0.5
1,087,533	-		MPMX19_03649	0.20	-1.7
1,087,533	-		MPMX19_03649	0.20	-0.2
1,088,099	+		MPMX19_03649	0.85	-0.5
1,088,099	+		MPMX19_03649	0.85	+1.0
1,088,099	+		MPMX19_03649	0.85	+0.9
1,088,099	+		MPMX19_03649	0.85	-1.0
1,088,099	+		MPMX19_03649	0.85	-0.3
1,088,100	-		MPMX19_03649	0.85	-1.1
1,088,100	-		MPMX19_03649	0.85	-1.4
1,088,100	-		MPMX19_03649	0.85	+0.2
1,088,100	-		MPMX19_03649	0.85	-0.8
1,088,108	+		MPMX19_03649	0.86	-0.5
1,088,108	+		MPMX19_03649	0.86	+0.5
1,088,108	+		MPMX19_03649	0.86	-2.2
1,088,109	-		MPMX19_03649	0.86	-2.0
1,088,109	-		MPMX19_03649	0.86	-1.0
1,088,109	-		MPMX19_03649	0.86	-1.5
1,088,109	-		MPMX19_03649	0.86	-0.5
1,088,410	+		MPMX19_03650	0.21	-0.2
1,088,410	+		MPMX19_03650	0.21	-0.2
1,088,410	+		MPMX19_03650	0.21	-1.0
1,088,410	+		MPMX19_03650	0.21	-0.3
1,088,410	+		MPMX19_03650	0.21	-1.2
1,088,410	+		MPMX19_03650	0.21	-1.4
1,088,410	+		MPMX19_03650	0.21	+1.6
1,088,410	+		MPMX19_03650	0.21	-0.8
1,088,410	+		MPMX19_03650	0.21	-0.8
1,088,411	-		MPMX19_03650	0.21	-1.5
1,088,411	-		MPMX19_03650	0.21	+0.2
1,088,411	-		MPMX19_03650	0.21	+0.9
1,088,411	-		MPMX19_03650	0.21	+0.6
1,088,411	-		MPMX19_03650	0.21	-0.3
1,088,411	-		MPMX19_03650	0.21	-0.8
1,088,411	-		MPMX19_03650	0.21	-1.7
1,088,411	-		MPMX19_03650	0.21	-1.0
1,088,411	-		MPMX19_03650	0.21	+0.6
1,088,411	-		MPMX19_03650	0.21	-1.2
1,088,411	-		MPMX19_03650	0.21	-1.0
1,088,411	-		MPMX19_03650	0.21	-0.7
1,088,411	-		MPMX19_03650	0.21	-1.3
1,088,411	-		MPMX19_03650	0.21	-0.7
1,088,437	+		MPMX19_03650	0.24	-1.0
1,088,437	+		MPMX19_03650	0.24	-0.3
1,088,437	+		MPMX19_03650	0.24	-0.8
1,088,437	+		MPMX19_03650	0.24	-1.1
1,088,437	+		MPMX19_03650	0.24	-0.8
1,088,438	-		MPMX19_03650	0.24	-0.4
1,088,438	-		MPMX19_03650	0.24	+0.8
1,088,617	+		MPMX19_03650	0.46	-0.4
1,088,617	+		MPMX19_03650	0.46	-0.2
1,088,618	-		MPMX19_03650	0.46	-1.2
1,088,618	-		MPMX19_03650	0.46	-1.1
1,088,618	-		MPMX19_03650	0.46	-0.7
1,088,618	-		MPMX19_03650	0.46	-1.8
1,088,618	-		MPMX19_03650	0.46	-1.3
1,088,719	+		MPMX19_03650	0.58	-1.9
1,088,719	+		MPMX19_03650	0.58	+0.0
1,088,719	+		MPMX19_03650	0.58	-1.9
1,088,720	-		MPMX19_03650	0.58	-2.8
1,088,720	-		MPMX19_03650	0.58	-0.1
1,088,720	-		MPMX19_03650	0.58	-1.5
1,088,720	-		MPMX19_03650	0.58	-1.0
1,088,720	-		MPMX19_03650	0.58	-0.5
1,088,720	-		MPMX19_03650	0.58	+0.6
1,088,720	-		MPMX19_03650	0.58	-0.0
1,088,932	+		MPMX19_03650	0.84	-1.5
1,088,932	+		MPMX19_03650	0.84	-1.5
1,088,932	+		MPMX19_03650	0.84	-0.8
1,088,932	+		MPMX19_03650	0.84	-0.9
1,088,932	+		MPMX19_03650	0.84	-1.7
1,088,932	+		MPMX19_03650	0.84	-2.2
1,088,932	+		MPMX19_03650	0.84	-0.7
1,088,933	-		MPMX19_03650	0.84	-1.6
1,088,933	-		MPMX19_03650	0.84	-0.8
1,088,933	-		MPMX19_03650	0.84	-0.2
1,088,933	-		MPMX19_03650	0.84	+0.5
1,088,933	-		MPMX19_03650	0.84	-1.4
1,088,956	+		MPMX19_03650	0.87	-0.8
1,088,956	+		MPMX19_03650	0.87	-1.7
1,088,956	+		MPMX19_03650	0.87	-1.5
1,088,957	-		MPMX19_03650	0.87	-0.4
1,088,957	-		MPMX19_03650	0.87	-1.1
1,089,065	-				-1.5
1,089,065	-				-0.8
1,089,065	-				-1.3
1,089,080	-				-0.8
1,089,329	+		MPMX19_03651	0.24	-0.0
1,089,329	+		MPMX19_03651	0.24	-0.8
1,089,329	+		MPMX19_03651	0.24	-0.5
1,089,329	+		MPMX19_03651	0.24	-0.1
1,089,330	-		MPMX19_03651	0.24	+0.2
1,089,330	-		MPMX19_03651	0.24	-1.1
1,089,330	-		MPMX19_03651	0.24	-1.4
1,089,455	+		MPMX19_03651	0.36	-0.3
1,089,455	+		MPMX19_03651	0.36	-1.0
1,089,455	+		MPMX19_03651	0.36	-0.7
1,089,455	+		MPMX19_03651	0.36	+0.5
1,089,455	+		MPMX19_03651	0.36	+1.0
1,089,455	+		MPMX19_03651	0.36	-1.5
1,089,456	-		MPMX19_03651	0.37	-0.1
1,089,456	-		MPMX19_03651	0.37	-0.2
1,089,456	-		MPMX19_03651	0.37	-1.3
1,089,456	-		MPMX19_03651	0.37	+3.0
1,089,456	-		MPMX19_03651	0.37	+0.0
1,089,456	-		MPMX19_03651	0.37	+0.2
1,089,456	-		MPMX19_03651	0.37	-1.4
1,089,592	+		MPMX19_03651	0.50	-2.0
1,089,592	+		MPMX19_03651	0.50	-0.5
1,089,592	+		MPMX19_03651	0.50	+0.2
1,089,592	+		MPMX19_03651	0.50	+0.0
1,089,592	+		MPMX19_03651	0.50	+0.6
1,089,593	-		MPMX19_03651	0.50	-1.0
1,089,593	-		MPMX19_03651	0.50	-1.1
1,089,593	-		MPMX19_03651	0.50	-1.2
1,089,593	-		MPMX19_03651	0.50	-1.1
1,089,644	+		MPMX19_03651	0.55	-2.7
1,089,644	+		MPMX19_03651	0.55	-0.5
1,089,644	+		MPMX19_03651	0.55	-1.3
1,089,644	+		MPMX19_03651	0.55	-2.2
1,089,644	+		MPMX19_03651	0.55	-2.0
1,089,644	+		MPMX19_03651	0.55	-0.4
1,089,644	+		MPMX19_03651	0.55	-1.3
1,089,644	+		MPMX19_03651	0.55	+0.9
1,089,644	+		MPMX19_03651	0.55	+1.0
1,089,644	+		MPMX19_03651	0.55	+1.3
1,089,644	+		MPMX19_03651	0.55	-0.8
1,089,644	+		MPMX19_03651	0.55	-1.0
1,089,644	+		MPMX19_03651	0.55	+0.6
1,089,644	+		MPMX19_03651	0.55	+0.0
1,089,644	+		MPMX19_03651	0.55	-1.1
1,089,644	+		MPMX19_03651	0.55	-2.1
1,089,644	+		MPMX19_03651	0.55	+0.2
1,089,644	+		MPMX19_03651	0.55	-1.0
1,089,644	+		MPMX19_03651	0.55	+0.9
1,089,644	+		MPMX19_03651	0.55	-2.3
1,089,644	+		MPMX19_03651	0.55	-1.5
1,089,644	+		MPMX19_03651	0.55	+0.7
1,089,644	+		MPMX19_03651	0.55	-0.2
1,089,644	+		MPMX19_03651	0.55	-1.0
1,089,644	+		MPMX19_03651	0.55	-1.2
1,089,644	+		MPMX19_03651	0.55	+0.2
1,089,644	+		MPMX19_03651	0.55	-0.4
1,089,644	+		MPMX19_03651	0.55	-0.5
1,089,644	+		MPMX19_03651	0.55	-1.9
1,089,644	+		MPMX19_03651	0.55	-1.0
1,089,644	+		MPMX19_03651	0.55	-1.1
1,089,645	-		MPMX19_03651	0.55	+0.8
1,089,645	-		MPMX19_03651	0.55	+0.3
1,089,645	-		MPMX19_03651	0.55	-2.5
1,089,645	-		MPMX19_03651	0.55	-1.0
1,089,645	-		MPMX19_03651	0.55	+0.0
1,089,645	-		MPMX19_03651	0.55	-0.1
1,089,645	-		MPMX19_03651	0.55	-1.5
1,089,645	-		MPMX19_03651	0.55	-0.3
1,089,645	-		MPMX19_03651	0.55	+0.2
1,089,645	-		MPMX19_03651	0.55	-0.2
1,089,645	-		MPMX19_03651	0.55	-1.1
1,089,645	-		MPMX19_03651	0.55	+0.0
1,089,645	-		MPMX19_03651	0.55	-0.9
1,089,645	-		MPMX19_03651	0.55	+0.7
1,089,645	-		MPMX19_03651	0.55	-0.4
1,089,645	-		MPMX19_03651	0.55	-0.1
1,089,645	-		MPMX19_03651	0.55	+1.6
1,089,645	-		MPMX19_03651	0.55	-0.1
1,089,645	-		MPMX19_03651	0.55	-0.8
1,089,645	-		MPMX19_03651	0.55	-0.5
1,089,645	-		MPMX19_03651	0.55	-0.5
1,089,645	-		MPMX19_03651	0.55	-0.8
1,089,743	+		MPMX19_03651	0.64	-1.5
1,089,743	+		MPMX19_03651	0.64	-1.8
1,089,744	-		MPMX19_03651	0.65	-2.5
1,089,744	-		MPMX19_03651	0.65	+0.3
1,089,941	+		MPMX19_03651	0.84	-1.7
1,089,941	+		MPMX19_03651	0.84	-1.3
1,089,941	+		MPMX19_03651	0.84	-1.0
1,089,941	+		MPMX19_03651	0.84	-1.8
1,089,941	+		MPMX19_03651	0.84	-1.4
1,089,941	+		MPMX19_03651	0.84	-1.4
1,089,942	-		MPMX19_03651	0.84	-0.3
1,089,942	-		MPMX19_03651	0.84	+1.0
1,089,942	-		MPMX19_03651	0.84	-0.3
1,089,942	-		MPMX19_03651	0.84	+0.3
1,089,942	-		MPMX19_03651	0.84	+1.5
1,089,942	-		MPMX19_03651	0.84	-0.5
1,089,942	-		MPMX19_03651	0.84	-1.0
1,089,942	-		MPMX19_03651	0.84	+0.6