Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03646

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,081,701	+		MPMX19_03645	0.44	-0.1
1,081,701	+		MPMX19_03645	0.44	-1.9
1,081,701	+		MPMX19_03645	0.44	+0.0
1,081,701	+		MPMX19_03645	0.44	+1.5
1,081,701	+		MPMX19_03645	0.44	+0.9
1,081,701	+		MPMX19_03645	0.44	-1.0
1,081,701	+		MPMX19_03645	0.44	-0.6
1,081,701	+		MPMX19_03645	0.44	-0.6
1,081,702	-		MPMX19_03645	0.44	-0.7
1,081,702	-		MPMX19_03645	0.44	-1.7
1,081,702	-		MPMX19_03645	0.44	-0.3
1,081,702	-		MPMX19_03645	0.44	-0.5
1,081,702	-		MPMX19_03645	0.44	+0.3
1,081,702	-		MPMX19_03645	0.44	+0.0
1,081,702	-		MPMX19_03645	0.44	-1.5
1,081,740	+		MPMX19_03645	0.46	+0.0
1,081,740	+		MPMX19_03645	0.46	-2.0
1,081,740	+		MPMX19_03645	0.46	+0.5
1,081,740	+		MPMX19_03645	0.46	-2.6
1,081,740	+		MPMX19_03645	0.46	-2.3
1,081,740	+		MPMX19_03645	0.46	-1.4
1,081,740	+		MPMX19_03645	0.46	-0.2
1,081,740	+		MPMX19_03645	0.46	-1.2
1,081,740	+		MPMX19_03645	0.46	-0.1
1,081,740	+		MPMX19_03645	0.46	-0.5
1,081,740	+		MPMX19_03645	0.46	-3.2
1,081,740	+		MPMX19_03645	0.46	-1.3
1,081,740	+		MPMX19_03645	0.46	-1.1
1,081,740	+		MPMX19_03645	0.46	-0.8
1,081,740	+		MPMX19_03645	0.46	-1.0
1,081,740	+		MPMX19_03645	0.46	+0.7
1,081,740	+		MPMX19_03645	0.46	-0.8
1,081,740	+		MPMX19_03645	0.46	-1.0
1,081,740	+		MPMX19_03645	0.46	-0.3
1,081,740	+		MPMX19_03645	0.46	+1.5
1,081,740	+		MPMX19_03645	0.46	-0.7
1,081,740	+		MPMX19_03645	0.46	+0.2
1,081,740	+		MPMX19_03645	0.46	+0.7
1,081,740	+		MPMX19_03645	0.46	-0.0
1,081,740	+		MPMX19_03645	0.46	-0.4
1,081,740	+		MPMX19_03645	0.46	+0.0
1,081,740	+		MPMX19_03645	0.46	+0.7
1,081,740	+		MPMX19_03645	0.46	+0.1
1,081,741	-		MPMX19_03645	0.46	-1.0
1,081,741	-		MPMX19_03645	0.46	-1.0
1,081,741	-		MPMX19_03645	0.46	-1.1
1,081,741	-		MPMX19_03645	0.46	-0.3
1,081,741	-		MPMX19_03645	0.46	-1.0
1,081,741	-		MPMX19_03645	0.46	-0.9
1,081,741	-		MPMX19_03645	0.46	-1.8
1,081,741	-		MPMX19_03645	0.46	-0.5
1,081,741	-		MPMX19_03645	0.46	+0.6
1,081,741	-		MPMX19_03645	0.46	-1.7
1,081,741	-		MPMX19_03645	0.46	+0.7
1,081,741	-		MPMX19_03645	0.46	-0.4
1,081,741	-		MPMX19_03645	0.46	-1.4
1,081,741	-		MPMX19_03645	0.46	-0.7
1,081,803	+		MPMX19_03645	0.51	-1.9
1,081,803	+		MPMX19_03645	0.51	+0.1
1,081,804	-		MPMX19_03645	0.51	-1.3
1,081,804	-		MPMX19_03645	0.51	+0.1
1,081,804	-		MPMX19_03645	0.51	-0.4
1,081,804	-		MPMX19_03645	0.51	+0.2
1,082,121	+		MPMX19_03645	0.72	-1.1
1,082,122	-		MPMX19_03645	0.72	-2.5
1,082,256	+		MPMX19_03645	0.81	-0.6
1,082,256	+		MPMX19_03645	0.81	-1.7
1,082,256	+		MPMX19_03645	0.81	-0.8
1,082,256	+		MPMX19_03645	0.81	-0.8
1,082,256	+		MPMX19_03645	0.81	-1.3
1,082,256	+		MPMX19_03645	0.81	+0.0
1,082,256	+		MPMX19_03645	0.81	-1.8
1,082,256	+		MPMX19_03645	0.81	+0.0
1,082,256	+		MPMX19_03645	0.81	+0.2
1,082,257	-		MPMX19_03645	0.81	-0.0
1,082,257	-		MPMX19_03645	0.81	-0.3
1,082,257	-		MPMX19_03645	0.81	+0.7
1,082,257	-		MPMX19_03645	0.81	+0.3
1,082,257	-		MPMX19_03645	0.81	-0.8
1,082,257	-		MPMX19_03645	0.81	+0.5
1,082,257	-		MPMX19_03645	0.81	-0.1
1,082,257	-		MPMX19_03645	0.81	-1.2
1,082,257	-		MPMX19_03645	0.81	-0.3
1,082,406	+				-0.1
1,082,407	-				+1.0
1,082,407	-				-0.3
1,082,614	+				-0.1
1,082,614	+				-1.1
1,082,614	+				+0.7
1,082,614	+				-1.3
1,082,614	+				-0.7
1,082,614	+				-2.0
1,082,614	+				+1.0
1,082,614	+				-1.0
1,082,614	+				-0.5
1,082,614	+				-0.3
1,082,614	+				-0.5
1,082,614	+				+1.5
1,082,614	+				-1.1
1,082,614	+				-1.0
1,082,614	+				-0.0
1,082,614	+				-1.1
1,082,614	+				+0.5
1,082,614	+				+0.0
1,082,614	+				-0.0
1,082,615	-				-0.5
1,082,615	-				+1.0
1,082,615	-				-1.4
1,082,615	-				-0.7
1,082,615	-				-1.8
1,082,615	-				-0.1
1,082,615	-				-0.1
1,082,615	-				+0.3
1,082,615	-				+2.0
1,082,615	-				-0.5
1,082,615	-				-0.8
1,082,615	-				-0.3
1,082,615	-				+0.7
1,082,760	-				+0.3
1,082,760	-				+0.9
1,082,760	-				-0.5
1,082,760	-				+0.5
1,082,889	-		MPMX19_03646	0.15	-1.0
1,083,337	+		MPMX19_03646	0.45	+1.5
1,083,337	+		MPMX19_03646	0.45	-2.0
1,083,338	-		MPMX19_03646	0.45	+0.0
1,083,338	-		MPMX19_03646	0.45	+1.0
1,083,353	+		MPMX19_03646	0.46	-0.3
1,083,353	+		MPMX19_03646	0.46	-1.1
1,083,354	-		MPMX19_03646	0.46	+0.0
1,083,480	-		MPMX19_03646	0.54	-0.5
1,083,593	+		MPMX19_03646	0.62	-0.1
1,083,593	+		MPMX19_03646	0.62	+0.5
1,083,593	+		MPMX19_03646	0.62	+0.1
1,083,593	+		MPMX19_03646	0.62	+0.5
1,083,593	+		MPMX19_03646	0.62	+1.0
1,083,593	+		MPMX19_03646	0.62	+0.0
1,083,593	+		MPMX19_03646	0.62	-1.3
1,083,593	+		MPMX19_03646	0.62	-0.8
1,083,594	-		MPMX19_03646	0.62	-0.3
1,083,594	-		MPMX19_03646	0.62	+0.5
1,083,594	-		MPMX19_03646	0.62	+0.6
1,083,594	-		MPMX19_03646	0.62	+0.0
1,083,594	-		MPMX19_03646	0.62	-0.5
1,083,594	-		MPMX19_03646	0.62	-2.3
1,083,704	+		MPMX19_03646	0.69	-1.3
1,083,704	+		MPMX19_03646	0.69	-1.9
1,083,704	+		MPMX19_03646	0.69	+0.5
1,083,704	+		MPMX19_03646	0.69	+0.0
1,083,704	+		MPMX19_03646	0.69	+1.0
1,083,704	+		MPMX19_03646	0.69	-1.4
1,083,704	+		MPMX19_03646	0.69	-0.3
1,083,704	+		MPMX19_03646	0.69	-1.1
1,083,704	+		MPMX19_03646	0.69	-1.8
1,083,705	-		MPMX19_03646	0.69	-1.3
1,083,705	-		MPMX19_03646	0.69	+0.6
1,083,705	-		MPMX19_03646	0.69	+0.0
1,083,705	-		MPMX19_03646	0.69	-0.7
1,083,705	-		MPMX19_03646	0.69	+0.3
1,083,705	-		MPMX19_03646	0.69	-0.8
1,083,705	-		MPMX19_03646	0.69	-2.5
1,084,018	+				-0.5
1,084,018	+				+0.0
1,084,260	+				-0.5
1,084,260	+				+1.9
1,084,261	-				-0.5
1,084,685	-		MPMX19_03647	0.42	-0.4
1,084,732	+		MPMX19_03647	0.46	+1.5
1,084,732	+		MPMX19_03647	0.46	+2.0
1,084,732	+		MPMX19_03647	0.46	+0.6
1,084,732	+		MPMX19_03647	0.46	+0.0
1,084,732	+		MPMX19_03647	0.46	-0.2
1,084,732	+		MPMX19_03647	0.46	-0.1
1,084,733	-		MPMX19_03647	0.46	-1.5
1,084,733	-		MPMX19_03647	0.46	+0.0
1,084,733	-		MPMX19_03647	0.46	+0.8
1,084,733	-		MPMX19_03647	0.46	+2.5
1,084,733	-		MPMX19_03647	0.46	-0.8
1,084,733	-		MPMX19_03647	0.46	-1.4
1,084,738	+		MPMX19_03647	0.47	-0.3
1,084,738	+		MPMX19_03647	0.47	+0.0
1,084,738	+		MPMX19_03647	0.47	-1.3
1,084,738	+		MPMX19_03647	0.47	-1.3
1,084,738	+		MPMX19_03647	0.47	-0.3
1,084,738	+		MPMX19_03647	0.47	-0.1
1,084,738	+		MPMX19_03647	0.47	-0.4
1,084,738	+		MPMX19_03647	0.47	-0.4
1,084,739	-		MPMX19_03647	0.47	-0.8
1,084,739	-		MPMX19_03647	0.47	-1.0
1,084,739	-		MPMX19_03647	0.47	-0.1
1,084,739	-		MPMX19_03647	0.47	-1.1
1,084,739	-		MPMX19_03647	0.47	-0.1
1,084,739	-		MPMX19_03647	0.47	+0.0
1,084,810	+		MPMX19_03647	0.53	+0.1
1,084,810	+		MPMX19_03647	0.53	+0.3
1,084,810	+		MPMX19_03647	0.53	+1.0
1,084,810	+		MPMX19_03647	0.53	-1.1
1,084,810	+		MPMX19_03647	0.53	-0.3
1,084,811	-		MPMX19_03647	0.53	+1.0
1,084,811	-		MPMX19_03647	0.53	+0.3
1,084,811	-		MPMX19_03647	0.53	+1.0
1,085,138	-		MPMX19_03647	0.80	-0.2