Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03643

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,077,385	+		MPMX19_03641	0.77	-2.3
1,077,385	+		MPMX19_03641	0.77	-0.3
1,077,386	-		MPMX19_03641	0.77	+1.3
1,077,386	-		MPMX19_03641	0.77	+0.8
1,077,501	+		MPMX19_03641	0.83	+0.8
1,077,501	+		MPMX19_03641	0.83	-0.4
1,077,501	+		MPMX19_03641	0.83	-0.1
1,077,501	+		MPMX19_03641	0.83	-0.8
1,077,502	-		MPMX19_03641	0.83	-1.2
1,077,502	-		MPMX19_03641	0.83	-1.3
1,077,502	-		MPMX19_03641	0.83	-0.3
1,077,502	-		MPMX19_03641	0.83	-0.4
1,077,502	-		MPMX19_03641	0.83	-1.4
1,077,502	-		MPMX19_03641	0.83	-1.8
1,077,531	+		MPMX19_03641	0.85	-0.8
1,077,531	+		MPMX19_03641	0.85	-1.1
1,077,532	-		MPMX19_03641	0.85	-1.1
1,077,532	-		MPMX19_03641	0.85	-1.5
1,077,532	-		MPMX19_03641	0.85	-0.7
1,077,532	-		MPMX19_03641	0.85	-0.9
1,077,532	-		MPMX19_03641	0.85	-0.5
1,077,580	-		MPMX19_03641	0.88	-2.5
1,077,580	-		MPMX19_03641	0.88	-0.3
1,077,682	-				-0.3
1,077,923	+		MPMX19_03642	0.21	+0.2
1,077,924	-		MPMX19_03642	0.21	+0.8
1,078,015	+		MPMX19_03642	0.39	-1.3
1,078,015	+		MPMX19_03642	0.39	-2.0
1,078,016	-		MPMX19_03642	0.39	-1.4
1,078,016	-		MPMX19_03642	0.39	-0.1
1,078,368	+				-2.3
1,078,368	+				-0.9
1,078,368	+				-0.9
1,078,368	+				+0.2
1,078,369	-				-0.2
1,078,369	-				-1.5
1,078,369	-				-0.1
1,078,413	+				-1.8
1,078,413	+				+0.1
1,078,413	+				-0.3
1,078,413	+				-1.6
1,078,413	+				-1.7
1,078,413	+				-1.7
1,078,413	+				-1.0
1,078,414	-				-0.7
1,078,414	-				+1.0
1,078,414	-				-0.5
1,078,414	-				+0.0
1,078,512	+				-0.5
1,078,512	+				-1.5
1,078,512	+				-0.5
1,078,512	+				-0.8
1,078,512	+				-1.3
1,078,512	+				+0.0
1,078,513	-				-1.2
1,078,513	-				-1.7
1,078,513	-				+1.0
1,078,513	-				+0.8
1,078,513	-				-0.7
1,078,614	+		MPMX19_03643	0.14	+0.2
1,078,614	+		MPMX19_03643	0.14	-0.6
1,078,615	-		MPMX19_03643	0.14	-1.9
1,078,615	-		MPMX19_03643	0.14	+0.0
1,078,615	-		MPMX19_03643	0.14	+0.1
1,078,615	-		MPMX19_03643	0.14	-0.2
1,078,734	+		MPMX19_03643	0.20	+0.8
1,078,734	+		MPMX19_03643	0.20	-1.0
1,078,734	+		MPMX19_03643	0.20	-1.8
1,078,734	+		MPMX19_03643	0.20	-1.9
1,078,734	+		MPMX19_03643	0.20	+0.0
1,078,735	-		MPMX19_03643	0.20	-1.9
1,078,735	-		MPMX19_03643	0.20	-1.0
1,078,735	-		MPMX19_03643	0.20	-1.4
1,078,735	-		MPMX19_03643	0.20	-0.5
1,078,758	+		MPMX19_03643	0.21	-0.2
1,078,758	+		MPMX19_03643	0.21	-0.3
1,078,758	+		MPMX19_03643	0.21	+0.0
1,078,758	+		MPMX19_03643	0.21	+0.2
1,078,758	+		MPMX19_03643	0.21	+1.5
1,078,758	+		MPMX19_03643	0.21	+1.6
1,078,758	+		MPMX19_03643	0.21	-1.1
1,078,758	+		MPMX19_03643	0.21	-0.1
1,078,758	+		MPMX19_03643	0.21	-0.3
1,078,758	+		MPMX19_03643	0.21	-1.1
1,078,758	+		MPMX19_03643	0.21	+1.3
1,078,758	+		MPMX19_03643	0.21	-1.1
1,078,758	+		MPMX19_03643	0.21	+0.3
1,078,759	-		MPMX19_03643	0.21	-0.5
1,078,759	-		MPMX19_03643	0.21	+0.7
1,078,759	-		MPMX19_03643	0.21	+0.5
1,078,759	-		MPMX19_03643	0.21	-1.9
1,078,759	-		MPMX19_03643	0.21	+0.0
1,078,759	-		MPMX19_03643	0.21	+0.0
1,078,759	-		MPMX19_03643	0.21	-1.0
1,078,759	-		MPMX19_03643	0.21	+0.1
1,078,775	-		MPMX19_03643	0.22	+1.5
1,078,775	-		MPMX19_03643	0.22	-0.5
1,078,775	-		MPMX19_03643	0.22	-2.0
1,078,776	+		MPMX19_03643	0.22	-0.5
1,078,836	+		MPMX19_03643	0.25	+0.6
1,078,836	+		MPMX19_03643	0.25	+0.0
1,078,836	+		MPMX19_03643	0.25	+0.5
1,078,837	-		MPMX19_03643	0.25	-1.0
1,078,837	-		MPMX19_03643	0.25	-2.2
1,078,837	-		MPMX19_03643	0.25	-1.5
1,078,837	-		MPMX19_03643	0.25	-0.2
1,078,845	+		MPMX19_03643	0.26	+0.3
1,078,845	+		MPMX19_03643	0.26	-0.9
1,078,845	+		MPMX19_03643	0.26	+0.0
1,078,845	+		MPMX19_03643	0.26	+1.5
1,078,845	+		MPMX19_03643	0.26	-1.5
1,078,846	-		MPMX19_03643	0.26	-1.0
1,078,846	-		MPMX19_03643	0.26	-0.5
1,078,846	-		MPMX19_03643	0.26	+1.2
1,078,846	-		MPMX19_03643	0.26	-0.5
1,078,846	-		MPMX19_03643	0.26	-0.7
1,078,846	-		MPMX19_03643	0.26	-1.1
1,078,846	-		MPMX19_03643	0.26	-1.7
1,078,846	-		MPMX19_03643	0.26	-0.6
1,078,846	-		MPMX19_03643	0.26	-0.4
1,078,846	-		MPMX19_03643	0.26	-0.0
1,078,905	+		MPMX19_03643	0.29	-0.7
1,078,905	+		MPMX19_03643	0.29	-2.0
1,078,906	-		MPMX19_03643	0.29	-0.4
1,078,906	-		MPMX19_03643	0.29	-0.9
1,078,906	-		MPMX19_03643	0.29	-0.2
1,078,906	-		MPMX19_03643	0.29	-1.1
1,079,082	+		MPMX19_03643	0.38	-0.1
1,079,082	+		MPMX19_03643	0.38	-0.8
1,079,082	+		MPMX19_03643	0.38	-0.3
1,079,082	+		MPMX19_03643	0.38	+1.0
1,079,082	+		MPMX19_03643	0.38	-1.1
1,079,083	-		MPMX19_03643	0.38	+0.0
1,079,083	-		MPMX19_03643	0.38	+0.5
1,079,083	-		MPMX19_03643	0.38	-1.9
1,079,083	-		MPMX19_03643	0.38	-0.6
1,079,083	-		MPMX19_03643	0.38	-1.0
1,079,083	-		MPMX19_03643	0.38	-0.1
1,079,083	-		MPMX19_03643	0.38	-0.4
1,079,083	-		MPMX19_03643	0.38	+0.5
1,079,083	-		MPMX19_03643	0.38	-2.3
1,079,091	+		MPMX19_03643	0.38	+0.0
1,079,091	+		MPMX19_03643	0.38	-1.9
1,079,091	+		MPMX19_03643	0.38	+0.7
1,079,092	-		MPMX19_03643	0.39	-0.4
1,079,092	-		MPMX19_03643	0.39	-0.7
1,079,092	-		MPMX19_03643	0.39	+0.7
1,079,092	-		MPMX19_03643	0.39	-0.5
1,079,239	-		MPMX19_03643	0.46	-0.8
1,079,334	+		MPMX19_03643	0.51	+0.7
1,079,335	-		MPMX19_03643	0.51	+0.6
1,079,355	+		MPMX19_03643	0.52	-1.9
1,079,355	+		MPMX19_03643	0.52	-0.4
1,079,355	+		MPMX19_03643	0.52	-1.2
1,079,355	+		MPMX19_03643	0.52	-0.6
1,079,355	+		MPMX19_03643	0.52	-1.0
1,079,356	-		MPMX19_03643	0.52	-0.6
1,079,356	-		MPMX19_03643	0.52	-0.3
1,079,356	-		MPMX19_03643	0.52	+0.5
1,079,356	-		MPMX19_03643	0.52	-0.9
1,079,356	-		MPMX19_03643	0.52	-0.3
1,079,356	-		MPMX19_03643	0.52	-0.5
1,079,358	+		MPMX19_03643	0.52	+0.0
1,079,358	+		MPMX19_03643	0.52	+1.0
1,079,358	+		MPMX19_03643	0.52	+2.0
1,079,358	+		MPMX19_03643	0.52	-0.3
1,079,358	+		MPMX19_03643	0.52	-2.0
1,079,358	+		MPMX19_03643	0.52	-1.1
1,079,359	-		MPMX19_03643	0.52	-1.7
1,079,359	-		MPMX19_03643	0.52	-1.3
1,079,359	-		MPMX19_03643	0.52	-0.3
1,079,452	+		MPMX19_03643	0.57	-1.4
1,079,452	+		MPMX19_03643	0.57	+1.0
1,079,453	-		MPMX19_03643	0.57	-0.3
1,079,484	+		MPMX19_03643	0.59	-0.9
1,079,484	+		MPMX19_03643	0.59	+0.0
1,079,484	+		MPMX19_03643	0.59	-2.2
1,079,484	+		MPMX19_03643	0.59	-0.1
1,079,484	+		MPMX19_03643	0.59	-1.1
1,079,485	-		MPMX19_03643	0.59	-2.0
1,079,485	-		MPMX19_03643	0.59	+0.0
1,079,485	-		MPMX19_03643	0.59	+0.9
1,079,485	-		MPMX19_03643	0.59	+0.2
1,079,485	-		MPMX19_03643	0.59	+0.4
1,079,485	-		MPMX19_03643	0.59	-1.8
1,079,485	-		MPMX19_03643	0.59	-0.5
1,079,485	-		MPMX19_03643	0.59	-0.2
1,079,485	-		MPMX19_03643	0.59	-0.7
1,079,554	+		MPMX19_03643	0.62	+0.2
1,079,554	+		MPMX19_03643	0.62	-0.5
1,079,554	+		MPMX19_03643	0.62	+1.6
1,079,554	+		MPMX19_03643	0.62	+0.2
1,079,555	-		MPMX19_03643	0.62	-1.3
1,079,555	-		MPMX19_03643	0.62	-0.4
1,079,555	-		MPMX19_03643	0.62	-0.4
1,079,555	-		MPMX19_03643	0.62	-0.8
1,079,610	+		MPMX19_03643	0.65	+0.3
1,079,611	-		MPMX19_03643	0.65	-0.3
1,079,868	+		MPMX19_03643	0.78	+0.5
1,079,868	+		MPMX19_03643	0.78	-0.3
1,079,869	-		MPMX19_03643	0.78	-1.4
1,079,869	-		MPMX19_03643	0.78	-1.1
1,079,944	+		MPMX19_03643	0.82	+0.9
1,079,944	+		MPMX19_03643	0.82	+0.5
1,079,944	+		MPMX19_03643	0.82	-0.5
1,079,944	+		MPMX19_03643	0.82	-0.8
1,079,944	+		MPMX19_03643	0.82	-0.3
1,079,944	+		MPMX19_03643	0.82	+0.0
1,079,944	+		MPMX19_03643	0.82	-0.3
1,079,944	+		MPMX19_03643	0.82	+1.3
1,079,944	+		MPMX19_03643	0.82	+0.2
1,079,944	+		MPMX19_03643	0.82	-1.0
1,079,944	+		MPMX19_03643	0.82	-2.3
1,079,944	+		MPMX19_03643	0.82	+0.3
1,079,944	+		MPMX19_03643	0.82	+0.6
1,079,944	+		MPMX19_03643	0.82	+0.2
1,079,944	+		MPMX19_03643	0.82	+1.3
1,079,944	+		MPMX19_03643	0.82	-0.3
1,079,944	+		MPMX19_03643	0.82	-0.4
1,079,944	+		MPMX19_03643	0.82	-0.0
1,079,944	+		MPMX19_03643	0.82	+0.0
1,079,944	+		MPMX19_03643	0.82	+0.5
1,079,944	+		MPMX19_03643	0.82	-0.1
1,079,944	+		MPMX19_03643	0.82	-0.5
1,079,944	+		MPMX19_03643	0.82	-1.2
1,079,944	+		MPMX19_03643	0.82	+0.2
1,079,944	+		MPMX19_03643	0.82	+0.2
1,079,944	+		MPMX19_03643	0.82	+0.0
1,079,944	+		MPMX19_03643	0.82	-0.5
1,079,944	+		MPMX19_03643	0.82	+1.0
1,079,944	+		MPMX19_03643	0.82	-1.9
1,079,945	-		MPMX19_03643	0.82	-1.0
1,079,945	-		MPMX19_03643	0.82	+1.0
1,079,945	-		MPMX19_03643	0.82	+0.0
1,079,945	-		MPMX19_03643	0.82	-0.5
1,079,945	-		MPMX19_03643	0.82	+0.8
1,079,945	-		MPMX19_03643	0.82	-0.3
1,079,945	-		MPMX19_03643	0.82	-0.4
1,079,945	-		MPMX19_03643	0.82	-1.3
1,079,945	-		MPMX19_03643	0.82	-0.5
1,079,945	-		MPMX19_03643	0.82	-0.1
1,079,945	-		MPMX19_03643	0.82	-1.1
1,079,945	-		MPMX19_03643	0.82	-1.3
1,079,945	-		MPMX19_03643	0.82	-0.2
1,079,945	-		MPMX19_03643	0.82	-0.3
1,079,945	-		MPMX19_03643	0.82	-1.0
1,079,945	-		MPMX19_03643	0.82	+2.0
1,079,945	-		MPMX19_03643	0.82	+0.2
1,079,945	-		MPMX19_03643	0.82	+1.2
1,079,945	-		MPMX19_03643	0.82	+0.7
1,079,945	-		MPMX19_03643	0.82	+1.5
1,079,945	-		MPMX19_03643	0.82	-3.0
1,079,946	+		MPMX19_03643	0.82	-0.3
1,079,947	-		MPMX19_03643	0.83	+2.6
1,079,947	-		MPMX19_03643	0.83	-1.3
1,079,947	-		MPMX19_03643	0.83	-0.1
1,080,051	+		MPMX19_03643	0.88	+0.0
1,080,051	+		MPMX19_03643	0.88	+0.7
1,080,051	+		MPMX19_03643	0.88	+0.5
1,080,051	+		MPMX19_03643	0.88	-0.5
1,080,051	+		MPMX19_03643	0.88	-1.1
1,080,051	+		MPMX19_03643	0.88	-0.2
1,080,051	+		MPMX19_03643	0.88	-0.3
1,080,051	+		MPMX19_03643	0.88	-0.8
1,080,051	+		MPMX19_03643	0.88	+0.5
1,080,051	+		MPMX19_03643	0.88	+0.8
1,080,051	+		MPMX19_03643	0.88	+0.0
1,080,051	+		MPMX19_03643	0.88	-0.8
1,080,051	+		MPMX19_03643	0.88	-0.9
1,080,051	+		MPMX19_03643	0.88	-1.5
1,080,051	+		MPMX19_03643	0.88	-0.0
1,080,051	+		MPMX19_03643	0.88	-1.9
1,080,052	-		MPMX19_03643	0.88	+0.0
1,080,052	-		MPMX19_03643	0.88	+0.5
1,080,052	-		MPMX19_03643	0.88	-0.5
1,080,052	-		MPMX19_03643	0.88	-0.3
1,080,052	-		MPMX19_03643	0.88	-0.5
1,080,052	-		MPMX19_03643	0.88	-0.8
1,080,052	-		MPMX19_03643	0.88	+0.6
1,080,052	-		MPMX19_03643	0.88	-0.7
1,080,052	-		MPMX19_03643	0.88	-0.4
1,080,052	-		MPMX19_03643	0.88	+0.3
1,080,052	-		MPMX19_03643	0.88	-2.1
1,080,052	-		MPMX19_03643	0.88	-0.4
1,080,329	+				-0.3
1,080,329	+				-1.5
1,080,329	+				+0.0
1,080,329	+				-2.0
1,080,329	+				-0.9
1,080,329	+				-0.5
1,080,330	-				+0.2
1,080,330	-				+1.5
1,080,330	-				-2.5
1,080,330	-				-1.3
1,080,330	-				-0.2
1,080,330	-				+0.8
1,080,330	-				-0.3
1,080,330	-				+1.3
1,080,331	+				+0.0
1,080,331	+				-0.3
1,080,331	+				+0.3
1,080,331	+				+0.4
1,080,331	+				+0.0
1,080,331	+				+0.7
1,080,331	+				+0.0
1,080,331	+				-1.1
1,080,332	-				-0.9
1,080,332	-				-1.1
1,080,332	-				-1.4
1,080,332	-				+0.3
1,080,332	-				+0.3
1,080,332	-				-1.0
1,080,332	-				-0.3
1,080,332	-				+0.6
1,080,332	-				-1.1
1,080,332	-				-1.4
1,080,358	-				-0.1
1,080,377	+				+1.0
1,080,381	+				-1.3
1,080,381	+				+0.5
1,080,381	+				-0.3
1,080,381	+				+0.0
1,080,381	+				-0.3
1,080,382	-				+0.5
1,080,382	-				-0.3
1,080,382	-				+0.0
1,080,382	-				+1.0
1,080,382	-				-0.7
1,080,382	-				+0.1
1,080,382	-				-0.8
1,080,775	-				-0.8
1,080,966	+				-0.1
1,080,967	-				-0.7
1,080,967	-				-2.4
1,081,006	+				-0.1
1,081,125	+				-1.8
1,081,125	+				-0.5
1,081,125	+				-0.2
1,081,125	+				+0.0
1,081,125	+				-0.6
1,081,125	+				-0.7
1,081,126	-				-0.4