Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03630

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,063,852	+		MPMX19_03628	0.29	-0.8
1,064,008	+		MPMX19_03628	0.52	-1.1
1,064,009	-		MPMX19_03628	0.52	-1.4
1,064,047	+		MPMX19_03628	0.58	-0.0
1,064,047	+		MPMX19_03628	0.58	-0.4
1,064,047	+		MPMX19_03628	0.58	-2.4
1,064,047	+		MPMX19_03628	0.58	+0.5
1,064,047	+		MPMX19_03628	0.58	-0.1
1,064,047	+		MPMX19_03628	0.58	-0.8
1,064,048	-		MPMX19_03628	0.58	+2.0
1,064,048	-		MPMX19_03628	0.58	-1.1
1,064,048	-		MPMX19_03628	0.58	-0.5
1,064,048	-		MPMX19_03628	0.58	-1.3
1,064,048	-		MPMX19_03628	0.58	-0.7
1,064,048	-		MPMX19_03628	0.58	-1.0
1,064,048	-		MPMX19_03628	0.58	-1.4
1,064,048	-		MPMX19_03628	0.58	-0.3
1,064,048	-		MPMX19_03628	0.58	-0.8
1,064,048	-		MPMX19_03628	0.58	+0.4
1,064,048	-		MPMX19_03628	0.58	+0.0
1,064,048	-		MPMX19_03628	0.58	-2.0
1,064,048	-		MPMX19_03628	0.58	-0.3
1,064,191	+		MPMX19_03628	0.79	-1.9
1,064,191	+		MPMX19_03628	0.79	-1.7
1,064,191	+		MPMX19_03628	0.79	+0.9
1,064,191	+		MPMX19_03628	0.79	+0.2
1,064,191	+		MPMX19_03628	0.79	-0.7
1,064,191	+		MPMX19_03628	0.79	+0.7
1,064,191	+		MPMX19_03628	0.79	-0.7
1,064,191	+		MPMX19_03628	0.79	-0.7
1,064,191	+		MPMX19_03628	0.79	-0.9
1,064,192	-		MPMX19_03628	0.79	+1.7
1,064,192	-		MPMX19_03628	0.79	-1.3
1,064,192	-		MPMX19_03628	0.79	-1.0
1,064,192	-		MPMX19_03628	0.79	-0.1
1,064,192	-		MPMX19_03628	0.79	-0.4
1,064,192	-		MPMX19_03628	0.79	+0.1
1,064,192	-		MPMX19_03628	0.79	+0.1
1,064,192	-		MPMX19_03628	0.79	-1.0
1,064,192	-		MPMX19_03628	0.79	-1.7
1,064,234	-		MPMX19_03628	0.85	+0.2
1,064,252	-		MPMX19_03628	0.87	-0.3
1,064,252	-		MPMX19_03628	0.87	+0.0
1,064,257	+		MPMX19_03628	0.88	-1.5
1,064,257	+		MPMX19_03628	0.88	-1.0
1,064,257	+		MPMX19_03628	0.88	-0.3
1,064,257	+		MPMX19_03628	0.88	-2.4
1,064,257	+		MPMX19_03628	0.88	-0.3
1,064,257	+		MPMX19_03628	0.88	+0.5
1,064,258	-		MPMX19_03628	0.88	-1.7
1,064,258	-		MPMX19_03628	0.88	-1.1
1,064,258	-		MPMX19_03628	0.88	-1.3
1,064,258	-		MPMX19_03628	0.88	+1.5
1,064,258	-		MPMX19_03628	0.88	+1.0
1,064,258	-		MPMX19_03628	0.88	+0.8
1,064,258	-		MPMX19_03628	0.88	-1.3
1,064,258	-		MPMX19_03628	0.88	-1.0
1,064,427	+				-0.7
1,064,427	+				-1.2
1,064,428	-				-0.7
1,064,428	-				-1.8
1,064,428	-				+0.5
1,064,469	+		MPMX19_03629	0.19	-0.6
1,064,469	+		MPMX19_03629	0.19	-0.1
1,064,469	+		MPMX19_03629	0.19	-0.3
1,064,469	+		MPMX19_03629	0.19	+0.3
1,064,469	+		MPMX19_03629	0.19	-2.1
1,064,469	+		MPMX19_03629	0.19	-0.6
1,064,469	+		MPMX19_03629	0.19	-0.1
1,064,469	+		MPMX19_03629	0.19	+0.5
1,064,469	+		MPMX19_03629	0.19	-0.8
1,064,469	+		MPMX19_03629	0.19	+0.1
1,064,469	+		MPMX19_03629	0.19	-1.0
1,064,469	+		MPMX19_03629	0.19	-0.4
1,064,470	-		MPMX19_03629	0.19	-0.9
1,064,470	-		MPMX19_03629	0.19	-2.1
1,064,470	-		MPMX19_03629	0.19	-0.1
1,064,470	-		MPMX19_03629	0.19	-1.8
1,064,470	-		MPMX19_03629	0.19	+1.1
1,064,470	-		MPMX19_03629	0.19	-0.3
1,064,470	-		MPMX19_03629	0.19	-0.4
1,064,470	-		MPMX19_03629	0.19	-0.9
1,064,470	-		MPMX19_03629	0.19	+1.0
1,064,470	-		MPMX19_03629	0.19	+0.6
1,064,470	-		MPMX19_03629	0.19	+0.0
1,064,757	+				-2.1
1,064,757	+				-0.8
1,064,757	+				+0.0
1,064,757	+				+0.5
1,064,758	-				+1.3
1,064,758	-				+0.2
1,064,758	-				+0.7
1,064,758	-				-0.7
1,064,758	-				+1.3
1,064,758	-				-3.1
1,064,758	-				+0.5
1,064,827	-				+0.2
1,065,059	+		MPMX19_03630	0.17	-1.7
1,065,059	+		MPMX19_03630	0.17	+1.2
1,065,060	-		MPMX19_03630	0.17	-2.7
1,065,266	+		MPMX19_03630	0.27	-1.2
1,065,311	+		MPMX19_03630	0.30	-0.7
1,065,312	-		MPMX19_03630	0.30	+0.2
1,065,413	+		MPMX19_03630	0.35	-0.6
1,065,413	+		MPMX19_03630	0.35	+1.0
1,065,413	+		MPMX19_03630	0.35	-0.3
1,065,414	-		MPMX19_03630	0.35	+0.8
1,065,452	+		MPMX19_03630	0.37	-0.8
1,065,453	-		MPMX19_03630	0.37	+2.6
1,065,542	+		MPMX19_03630	0.41	+0.1
1,065,543	-		MPMX19_03630	0.41	-2.5
1,065,543	-		MPMX19_03630	0.41	-0.5
1,065,543	-		MPMX19_03630	0.41	-0.8
1,065,555	-		MPMX19_03630	0.42	-1.4
1,065,597	+		MPMX19_03630	0.44	-0.7
1,065,598	-		MPMX19_03630	0.44	-0.5
1,065,598	-		MPMX19_03630	0.44	-0.5
1,065,608	+		MPMX19_03630	0.45	-0.3
1,065,608	+		MPMX19_03630	0.45	-0.5
1,065,608	+		MPMX19_03630	0.45	-0.8
1,065,608	+		MPMX19_03630	0.45	+0.2
1,065,608	+		MPMX19_03630	0.45	-0.4
1,065,608	+		MPMX19_03630	0.45	-0.7
1,065,609	-		MPMX19_03630	0.45	-2.1
1,065,609	-		MPMX19_03630	0.45	-1.3
1,065,609	-		MPMX19_03630	0.45	-2.0
1,065,609	-		MPMX19_03630	0.45	-0.3
1,065,609	-		MPMX19_03630	0.45	-0.8
1,065,609	-		MPMX19_03630	0.45	-0.2
1,065,609	-		MPMX19_03630	0.45	-0.5
1,065,698	+		MPMX19_03630	0.49	-0.7
1,065,698	+		MPMX19_03630	0.49	-1.4
1,065,698	+		MPMX19_03630	0.49	-1.3
1,065,698	+		MPMX19_03630	0.49	-0.4
1,065,698	+		MPMX19_03630	0.49	-1.8
1,065,699	-		MPMX19_03630	0.49	-0.2
1,065,731	+		MPMX19_03630	0.51	+0.5
1,065,732	-		MPMX19_03630	0.51	-1.3
1,065,732	-		MPMX19_03630	0.51	+0.8
1,065,732	-		MPMX19_03630	0.51	+0.3
1,065,860	+		MPMX19_03630	0.58	+0.5
1,065,860	+		MPMX19_03630	0.58	+0.2
1,065,860	+		MPMX19_03630	0.58	-2.5
1,065,860	+		MPMX19_03630	0.58	-0.2
1,065,860	+		MPMX19_03630	0.58	-2.0
1,065,860	+		MPMX19_03630	0.58	-0.3
1,065,860	+		MPMX19_03630	0.58	+0.0
1,065,860	+		MPMX19_03630	0.58	+0.0
1,065,861	-		MPMX19_03630	0.58	+0.1
1,065,861	-		MPMX19_03630	0.58	-1.3
1,065,861	-		MPMX19_03630	0.58	+2.0
1,065,861	-		MPMX19_03630	0.58	-0.2
1,065,861	-		MPMX19_03630	0.58	-0.3
1,065,861	-		MPMX19_03630	0.58	+0.7
1,065,861	-		MPMX19_03630	0.58	+1.0
1,065,861	-		MPMX19_03630	0.58	-0.8
1,065,861	-		MPMX19_03630	0.58	-0.3
1,065,861	-		MPMX19_03630	0.58	+1.2
1,065,861	-		MPMX19_03630	0.58	-1.3
1,065,991	-		MPMX19_03630	0.64	+0.0
1,066,028	+		MPMX19_03630	0.66	-0.8
1,066,028	+		MPMX19_03630	0.66	-1.1
1,066,028	+		MPMX19_03630	0.66	+0.5
1,066,028	+		MPMX19_03630	0.66	-0.7
1,066,028	+		MPMX19_03630	0.66	+1.7
1,066,029	-		MPMX19_03630	0.66	-1.7
1,066,029	-		MPMX19_03630	0.66	+0.2
1,066,029	-		MPMX19_03630	0.66	+0.2
1,066,029	-		MPMX19_03630	0.66	-0.6
1,066,040	+		MPMX19_03630	0.67	-1.0
1,066,041	-		MPMX19_03630	0.67	-0.3
1,066,041	-		MPMX19_03630	0.67	+0.0
1,066,154	+		MPMX19_03630	0.73	-0.7
1,066,154	+		MPMX19_03630	0.73	+0.2
1,066,154	+		MPMX19_03630	0.73	-1.4
1,066,154	+		MPMX19_03630	0.73	-1.7
1,066,154	+		MPMX19_03630	0.73	-0.4
1,066,154	+		MPMX19_03630	0.73	-1.4
1,066,154	+		MPMX19_03630	0.73	-0.4
1,066,154	+		MPMX19_03630	0.73	-1.4
1,066,154	+		MPMX19_03630	0.73	+0.5
1,066,154	+		MPMX19_03630	0.73	-0.3
1,066,154	+		MPMX19_03630	0.73	-0.5
1,066,154	+		MPMX19_03630	0.73	-2.6
1,066,155	-		MPMX19_03630	0.73	-1.9
1,066,155	-		MPMX19_03630	0.73	-1.0
1,066,155	-		MPMX19_03630	0.73	-1.1
1,066,155	-		MPMX19_03630	0.73	-0.7
1,066,155	-		MPMX19_03630	0.73	-0.9
1,066,155	-		MPMX19_03630	0.73	+0.6
1,066,155	-		MPMX19_03630	0.73	+0.0
1,066,155	-		MPMX19_03630	0.73	+0.1
1,066,447	-		MPMX19_03630	0.88	+0.7
1,066,515	-				+1.0
1,066,517	+				-0.0
1,066,517	+				-1.0
1,066,517	+				-0.3
1,066,517	+				-0.5
1,066,517	+				+0.5
1,066,517	+				-0.6
1,066,517	+				-0.5
1,066,517	+				-1.0
1,066,517	+				-0.8
1,066,517	+				-2.1
1,066,517	+				-1.0
1,066,518	-				-2.0
1,066,518	-				-0.8
1,066,518	-				+0.0
1,066,518	-				-1.0
1,066,518	-				+0.7
1,066,518	-				+0.6
1,066,518	-				-1.1
1,066,518	-				-0.2
1,066,518	-				+0.1
1,066,518	-				-0.3
1,066,518	-				+0.1
1,066,518	-				-0.3
1,066,518	-				-0.5
1,066,518	-				+0.5
1,066,518	-				-1.3
1,066,518	-				+0.6
1,066,518	-				-0.8
1,066,518	-				-1.0
1,066,518	-				+0.1
1,066,518	-				+0.3
1,066,616	+				+1.0
1,066,617	-				-1.3
1,066,617	-				+0.1
1,066,874	+		MPMX19_03631	0.23	-1.3
1,066,874	+		MPMX19_03631	0.23	+0.6
1,066,875	-		MPMX19_03631	0.23	+0.0
1,067,144	-		MPMX19_03631	0.83	+0.0
1,067,216	+				-0.5
1,067,477	+		MPMX19_03632	0.12	-0.3
1,067,477	+		MPMX19_03632	0.12	+0.6
1,067,478	-		MPMX19_03632	0.12	+0.0
1,067,491	+		MPMX19_03632	0.13	+0.5
1,067,491	+		MPMX19_03632	0.13	-0.1
1,067,491	+		MPMX19_03632	0.13	-1.1
1,067,491	+		MPMX19_03632	0.13	-1.3
1,067,492	-		MPMX19_03632	0.13	+0.0
1,067,492	-		MPMX19_03632	0.13	+0.0
1,067,597	+		MPMX19_03632	0.20	-1.4
1,067,597	+		MPMX19_03632	0.20	+0.2
1,067,597	+		MPMX19_03632	0.20	-0.8
1,067,597	+		MPMX19_03632	0.20	-0.2
1,067,597	+		MPMX19_03632	0.20	-0.3
1,067,597	+		MPMX19_03632	0.20	-0.5
1,067,597	+		MPMX19_03632	0.20	-1.0
1,067,597	+		MPMX19_03632	0.20	-1.7
1,067,597	+		MPMX19_03632	0.20	+0.6
1,067,598	-		MPMX19_03632	0.20	+0.7
1,067,598	-		MPMX19_03632	0.20	-0.8
1,067,598	-		MPMX19_03632	0.20	-0.7
1,067,598	-		MPMX19_03632	0.20	-0.4
1,067,598	-		MPMX19_03632	0.20	+0.0
1,067,598	-		MPMX19_03632	0.20	+0.1
1,067,598	-		MPMX19_03632	0.20	+0.5