Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03620 and MPMX19_03621 overlap by 23 nucleotides MPMX19_03621 and MPMX19_03622 are separated by 256 nucleotides
MPMX19_03620: MPMX19_03620 - hypothetical protein, at 1,052,764 to 1,054,866
_03620
MPMX19_03621: MPMX19_03621 - N-acetylglucosamine repressor, at 1,054,844 to 1,056,073
_03621
MPMX19_03622: MPMX19_03622 - Ribose import ATP-binding protein RbsA, at 1,056,330 to 1,057,844
_03622
Position (kb)
1054
1055
1056
1057 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.960 kb on - strand at 1054.960 kb on - strand at 1054.960 kb on - strand at 1054.960 kb on - strand at 1054.960 kb on - strand at 1055.005 kb on - strand, within MPMX19_03621 at 1055.120 kb on - strand, within MPMX19_03621 at 1055.356 kb on + strand, within MPMX19_03621 at 1055.356 kb on + strand, within MPMX19_03621 at 1055.356 kb on + strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.394 kb on + strand, within MPMX19_03621 at 1055.395 kb on - strand, within MPMX19_03621 at 1055.538 kb on + strand, within MPMX19_03621 at 1055.538 kb on + strand, within MPMX19_03621 at 1055.538 kb on + strand, within MPMX19_03621 at 1055.538 kb on + strand, within MPMX19_03621 at 1055.538 kb on + strand, within MPMX19_03621 at 1055.538 kb on + strand, within MPMX19_03621 at 1055.539 kb on - strand, within MPMX19_03621 at 1055.539 kb on - strand, within MPMX19_03621 at 1055.539 kb on - strand, within MPMX19_03621 at 1055.539 kb on - strand, within MPMX19_03621 at 1055.539 kb on - strand, within MPMX19_03621 at 1055.539 kb on - strand, within MPMX19_03621 at 1055.539 kb on - strand, within MPMX19_03621 at 1055.565 kb on + strand, within MPMX19_03621 at 1056.182 kb on - strand at 1056.182 kb on - strand at 1056.379 kb on + strand at 1056.380 kb on - strand at 1056.380 kb on - strand at 1056.487 kb on - strand, within MPMX19_03622 at 1056.912 kb on + strand, within MPMX19_03622 at 1056.912 kb on + strand, within MPMX19_03622 at 1056.912 kb on + strand, within MPMX19_03622 at 1056.912 kb on + strand, within MPMX19_03622 at 1056.912 kb on + strand, within MPMX19_03622 at 1056.912 kb on + strand, within MPMX19_03622 at 1056.912 kb on + strand, within MPMX19_03622 at 1056.912 kb on + strand, within MPMX19_03622 at 1056.912 kb on + strand, within MPMX19_03622 at 1056.912 kb on + strand, within MPMX19_03622 at 1056.912 kb on + strand, within MPMX19_03622 at 1056.912 kb on + strand, within MPMX19_03622 at 1056.912 kb on + strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622 at 1056.913 kb on - strand, within MPMX19_03622
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 1,054,959 + -1.3 1,054,959 + +0.7 1,054,959 + -0.8 1,054,959 + -0.5 1,054,959 + +0.3 1,054,959 + -0.5 1,054,959 + -1.2 1,054,959 + -0.4 1,054,959 + -0.3 1,054,959 + +0.1 1,054,960 - +0.3 1,054,960 - +0.5 1,054,960 - +1.5 1,054,960 - +0.0 1,054,960 - -1.8 1,055,005 - MPMX19_03621 0.13 -0.8 1,055,120 - MPMX19_03621 0.22 -0.7 1,055,356 + MPMX19_03621 0.42 -0.1 1,055,356 + MPMX19_03621 0.42 -1.8 1,055,356 + MPMX19_03621 0.42 -0.8 1,055,357 - MPMX19_03621 0.42 +0.7 1,055,357 - MPMX19_03621 0.42 -0.8 1,055,357 - MPMX19_03621 0.42 +0.4 1,055,357 - MPMX19_03621 0.42 +1.0 1,055,357 - MPMX19_03621 0.42 -0.5 1,055,357 - MPMX19_03621 0.42 +0.2 1,055,357 - MPMX19_03621 0.42 +1.2 1,055,357 - MPMX19_03621 0.42 -1.0 1,055,357 - MPMX19_03621 0.42 +0.7 1,055,357 - MPMX19_03621 0.42 -0.3 1,055,394 + MPMX19_03621 0.45 -1.1 1,055,395 - MPMX19_03621 0.45 +0.5 1,055,538 + MPMX19_03621 0.56 -0.5 1,055,538 + MPMX19_03621 0.56 +0.6 1,055,538 + MPMX19_03621 0.56 +0.0 1,055,538 + MPMX19_03621 0.56 -0.4 1,055,538 + MPMX19_03621 0.56 -0.0 1,055,538 + MPMX19_03621 0.56 +1.6 1,055,539 - MPMX19_03621 0.57 -1.7 1,055,539 - MPMX19_03621 0.57 -0.1 1,055,539 - MPMX19_03621 0.57 -0.2 1,055,539 - MPMX19_03621 0.57 -0.8 1,055,539 - MPMX19_03621 0.57 +0.0 1,055,539 - MPMX19_03621 0.57 +0.0 1,055,539 - MPMX19_03621 0.57 +0.7 1,055,565 + MPMX19_03621 0.59 +0.5 1,056,182 - -0.1 1,056,182 - -1.5 1,056,379 + +0.2 1,056,380 - +0.6 1,056,380 - +0.2 1,056,487 - MPMX19_03622 0.10 -0.8 1,056,912 + MPMX19_03622 0.38 -1.0 1,056,912 + MPMX19_03622 0.38 -0.3 1,056,912 + MPMX19_03622 0.38 -0.8 1,056,912 + MPMX19_03622 0.38 +1.6 1,056,912 + MPMX19_03622 0.38 +1.8 1,056,912 + MPMX19_03622 0.38 -0.8 1,056,912 + MPMX19_03622 0.38 -0.8 1,056,912 + MPMX19_03622 0.38 -0.3 1,056,912 + MPMX19_03622 0.38 -2.2 1,056,912 + MPMX19_03622 0.38 +1.4 1,056,912 + MPMX19_03622 0.38 -1.1 1,056,912 + MPMX19_03622 0.38 -0.8 1,056,912 + MPMX19_03622 0.38 -0.5 1,056,913 - MPMX19_03622 0.38 -0.3 1,056,913 - MPMX19_03622 0.38 -0.4 1,056,913 - MPMX19_03622 0.38 -1.4 1,056,913 - MPMX19_03622 0.38 -0.4 1,056,913 - MPMX19_03622 0.38 -1.2 1,056,913 - MPMX19_03622 0.38 +0.1 1,056,913 - MPMX19_03622 0.38 -1.3 1,056,913 - MPMX19_03622 0.38 -1.0 1,056,913 - MPMX19_03622 0.38 -0.3 1,056,913 - MPMX19_03622 0.38 -1.1 1,056,913 - MPMX19_03622 0.38 -0.5 1,056,913 - MPMX19_03622 0.38 -1.0 1,056,913 - MPMX19_03622 0.38 -1.0 1,056,913 - MPMX19_03622 0.38 -1.7 1,056,913 - MPMX19_03622 0.38 -0.8 1,056,913 - MPMX19_03622 0.38 -0.1 1,056,913 - MPMX19_03622 0.38 -0.1
Or see this region's nucleotide sequence