Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03606

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,035,402	+		MPMX19_03605	0.62	-1.9
1,035,402	+		MPMX19_03605	0.62	-0.6
1,035,402	+		MPMX19_03605	0.62	-1.3
1,035,402	+		MPMX19_03605	0.62	-0.4
1,035,402	+		MPMX19_03605	0.62	+1.6
1,035,402	+		MPMX19_03605	0.62	-1.4
1,035,402	+		MPMX19_03605	0.62	-0.6
1,035,403	-		MPMX19_03605	0.62	-0.1
1,035,403	-		MPMX19_03605	0.62	-0.3
1,035,528	+		MPMX19_03605	0.74	-0.4
1,035,528	+		MPMX19_03605	0.74	+0.0
1,035,529	-		MPMX19_03605	0.74	+0.5
1,035,529	-		MPMX19_03605	0.74	-0.5
1,035,529	-		MPMX19_03605	0.74	-1.0
1,035,529	-		MPMX19_03605	0.74	-0.3
1,035,529	-		MPMX19_03605	0.74	-0.2
1,035,529	-		MPMX19_03605	0.74	-0.7
1,035,529	-		MPMX19_03605	0.74	-2.7
1,035,529	-		MPMX19_03605	0.74	+0.1
1,035,687	+				-0.7
1,035,687	+				-0.8
1,035,687	+				-0.4
1,035,687	+				-0.4
1,035,687	+				-0.7
1,035,687	+				+0.0
1,035,687	+				-0.8
1,035,687	+				-1.4
1,035,688	-				-1.9
1,035,688	-				+0.7
1,035,688	-				-0.1
1,035,688	-				-0.5
1,035,688	-				+0.5
1,035,688	-				-1.4
1,035,688	-				-1.0
1,035,688	-				+0.9
1,035,688	-				-2.7
1,035,713	+				+0.0
1,035,713	+				-1.1
1,035,713	+				+1.0
1,035,713	+				+0.2
1,035,713	+				+1.7
1,035,714	-				-0.7
1,035,714	-				+0.3
1,035,714	-				-0.5
1,035,714	-				-1.4
1,035,714	-				-1.0
1,035,714	-				-0.9
1,035,741	+				-0.3
1,035,954	+				+0.7
1,035,954	+				+0.9
1,035,954	+				+1.4
1,035,954	+				-0.8
1,035,955	-				+0.8
1,035,955	-				+0.4
1,035,955	-				-0.1
1,036,838	+				-0.4
1,036,838	+				+0.3
1,036,839	-				+3.4
1,036,839	-				-0.3
1,036,839	-				+0.5
1,036,839	-				+0.1
1,037,156	+		MPMX19_03607	0.16	+0.3
1,037,156	+		MPMX19_03607	0.16	+0.8
1,037,156	+		MPMX19_03607	0.16	-0.5
1,037,157	-		MPMX19_03607	0.16	-0.5
1,037,157	-		MPMX19_03607	0.16	-0.7
1,037,157	-		MPMX19_03607	0.16	+1.0
1,037,157	-		MPMX19_03607	0.16	+0.2
1,037,157	-		MPMX19_03607	0.16	-0.6
1,037,157	-		MPMX19_03607	0.16	-1.4
1,037,157	-		MPMX19_03607	0.16	-0.8
1,037,157	-		MPMX19_03607	0.16	+0.6
1,037,307	-		MPMX19_03607	0.27	-0.5
1,037,307	-		MPMX19_03607	0.27	-0.3
1,037,307	-		MPMX19_03607	0.27	-0.1
1,037,309	+		MPMX19_03607	0.27	-0.7
1,037,309	+		MPMX19_03607	0.27	-2.7
1,037,309	+		MPMX19_03607	0.27	-0.2
1,037,309	+		MPMX19_03607	0.27	+0.2
1,037,309	+		MPMX19_03607	0.27	-0.0
1,037,309	+		MPMX19_03607	0.27	-1.7
1,037,309	+		MPMX19_03607	0.27	+1.1
1,037,309	+		MPMX19_03607	0.27	-0.3
1,037,309	+		MPMX19_03607	0.27	-1.0
1,037,309	+		MPMX19_03607	0.27	-0.5
1,037,310	-		MPMX19_03607	0.27	-1.2
1,037,310	-		MPMX19_03607	0.27	-1.0
1,037,310	-		MPMX19_03607	0.27	+0.2
1,037,310	-		MPMX19_03607	0.27	-0.9
1,037,310	-		MPMX19_03607	0.27	-1.0
1,037,310	-		MPMX19_03607	0.27	+0.3
1,037,310	-		MPMX19_03607	0.27	-2.0
1,037,310	-		MPMX19_03607	0.27	+0.1
1,037,310	-		MPMX19_03607	0.27	+0.2
1,037,321	+		MPMX19_03607	0.27	-1.1
1,037,321	+		MPMX19_03607	0.27	+1.5
1,037,321	+		MPMX19_03607	0.27	-0.8
1,037,321	+		MPMX19_03607	0.27	-1.3
1,037,322	-		MPMX19_03607	0.28	-1.1
1,037,322	-		MPMX19_03607	0.28	-1.0
1,037,322	-		MPMX19_03607	0.28	-1.2
1,037,322	-		MPMX19_03607	0.28	-0.8
1,037,369	+		MPMX19_03607	0.31	+1.0
1,037,369	+		MPMX19_03607	0.31	-1.0
1,037,369	+		MPMX19_03607	0.31	-0.1
1,037,370	-		MPMX19_03607	0.31	-0.8
1,037,370	-		MPMX19_03607	0.31	-0.4
1,037,370	-		MPMX19_03607	0.31	-0.7
1,037,381	+		MPMX19_03607	0.32	+1.4
1,037,381	+		MPMX19_03607	0.32	-0.5
1,037,381	+		MPMX19_03607	0.32	-2.0
1,037,381	+		MPMX19_03607	0.32	-0.3
1,037,381	+		MPMX19_03607	0.32	-0.8
1,037,381	+		MPMX19_03607	0.32	+0.5
1,037,381	+		MPMX19_03607	0.32	+0.5
1,037,381	+		MPMX19_03607	0.32	-1.3
1,037,381	+		MPMX19_03607	0.32	-0.8
1,037,382	-		MPMX19_03607	0.32	-1.0
1,037,382	-		MPMX19_03607	0.32	-0.8
1,037,382	-		MPMX19_03607	0.32	-0.5
1,037,606	+		MPMX19_03607	0.47	-1.7
1,037,606	+		MPMX19_03607	0.47	+0.3
1,037,606	+		MPMX19_03607	0.47	-2.3
1,037,606	+		MPMX19_03607	0.47	-0.7
1,037,606	+		MPMX19_03607	0.47	-1.4
1,037,606	+		MPMX19_03607	0.47	+0.8
1,037,606	+		MPMX19_03607	0.47	+0.2
1,037,606	+		MPMX19_03607	0.47	-2.2
1,037,606	+		MPMX19_03607	0.47	-2.3
1,037,606	+		MPMX19_03607	0.47	+1.1
1,037,607	-		MPMX19_03607	0.47	-0.0
1,037,607	-		MPMX19_03607	0.47	-0.3
1,037,607	-		MPMX19_03607	0.47	-1.5
1,037,607	-		MPMX19_03607	0.47	+0.7
1,037,607	-		MPMX19_03607	0.47	-1.1
1,037,607	-		MPMX19_03607	0.47	+0.7
1,037,607	-		MPMX19_03607	0.47	-0.3
1,037,607	-		MPMX19_03607	0.47	-1.1
1,037,607	-		MPMX19_03607	0.47	-1.6
1,037,607	-		MPMX19_03607	0.47	-1.1
1,037,607	-		MPMX19_03607	0.47	-0.2
1,037,726	+		MPMX19_03607	0.55	-0.7
1,037,726	+		MPMX19_03607	0.55	-1.9
1,037,807	+		MPMX19_03607	0.61	-0.4
1,037,807	+		MPMX19_03607	0.61	-0.1
1,037,807	+		MPMX19_03607	0.61	+0.0
1,037,807	+		MPMX19_03607	0.61	-0.7
1,037,808	-		MPMX19_03607	0.61	+0.1
1,037,808	-		MPMX19_03607	0.61	-3.1